Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_I03
(845 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O08719|EVL_RAT Ena/vasodilator-stimulated phosphoprotein... 42 0.002
sp|P70429|EVL_MOUSE Ena/vasodilator-stimulated phosphoprote... 41 0.005
sp|Q9UI08|EVL_HUMAN Ena/vasodilator-stimulated phosphoprote... 40 0.006
sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein ... 39 0.024
sp|Q9NJG9|SUZ12_DROME Polycomb protein Su(z)12 (Suppressor ... 34 0.58
sp|P18106|FPS_DROME Tyrosine-protein kinase Fps85D (dFer) 33 0.99
sp|Q04279|YMX6_YEAST Hypothetical 105.9 kDa protein in ADH3... 33 1.3
sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/DLP1/DLP3 32 2.2
sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B 32 2.2
sp|P0C0R4|LIP_STAES Lipase precursor (Glycerol ester hydrol... 32 2.9
>sp|O08719|EVL_RAT Ena/vasodilator-stimulated phosphoprotein-like protein
(Ena/VASP-like protein)
Length = 393
Score = 42.4 bits (98), Expect = 0.002
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Frame = +2
Query: 539 EESNQSGLASQLRQAKLKSRGGPVEPEVSSNQNKNVTSSATLGRA----GGDSMMSEMQR 706
+ES+ SGLA+ L AKL+ P + S + + TS + RA GG +M EM +
Sbjct: 214 DESSASGLAAALAGAKLRRVQRP--EDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNK 271
Query: 707 VLAARKK-AKEVVKPTGSECTDNGGSGDNSSKNP 805
+LA R+K A + KP + +N ++S +P
Sbjct: 272 LLAKRRKAASQTDKPADRKEDENQTEDPSTSPSP 305
>sp|P70429|EVL_MOUSE Ena/vasodilator-stimulated phosphoprotein-like protein
(Ena/VASP-like protein)
Length = 414
Score = 40.8 bits (94), Expect = 0.005
Identities = 31/97 (31%), Positives = 50/97 (51%), Gaps = 5/97 (5%)
Frame = +2
Query: 539 EESNQSGLASQLRQAKLKSRGGPVEPEVSSNQNKNVTSSATLGRA----GGDSMMSEMQR 706
+ES+ SGLA+ L AKL+ P + S + + TS + RA GG +M EM +
Sbjct: 214 DESSASGLAAALAGAKLRRVQRP--EDASGGSSPSGTSKSDANRASSGGGGGGLMEEMNK 271
Query: 707 VLAARKK-AKEVVKPTGSECTDNGGSGDNSSKNPQWR 814
+LA R+K A + KP + ++ ++S +P R
Sbjct: 272 LLAKRRKAASQTDKPADRKEDESQTEDPSTSPSPGTR 308
>sp|Q9UI08|EVL_HUMAN Ena/vasodilator-stimulated phosphoprotein-like protein
(Ena/VASP-like protein)
Length = 416
Score = 40.4 bits (93), Expect = 0.006
Identities = 31/99 (31%), Positives = 51/99 (51%), Gaps = 5/99 (5%)
Frame = +2
Query: 533 SDEESNQSGLASQLRQAKLKSRGGPVEPEVSSNQNKNVTSSATLGRA----GGDSMMSEM 700
S +ES+ SGLA+ + AKL+ P + S + + TS + RA GG +M EM
Sbjct: 214 SHDESSMSGLAAAIAGAKLRRVQRP--EDASGGSSPSGTSKSDANRASSGGGGGGLMEEM 271
Query: 701 QRVLAARKK-AKEVVKPTGSECTDNGGSGDNSSKNPQWR 814
++LA R+K A + KP + ++ ++S +P R
Sbjct: 272 NKLLAKRRKAASQSDKPAEKKEDESQMEDPSTSPSPGTR 310
>sp|P50552|VASP_HUMAN Vasodilator-stimulated phosphoprotein (VASP)
Length = 380
Score = 38.5 bits (88), Expect = 0.024
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 7/79 (8%)
Frame = +2
Query: 557 GLASQLRQAKLK-------SRGGPVEPEVSSNQNKNVTSSATLGRAGGDSMMSEMQRVLA 715
GLA+ + AKL+ + GGP P+ S GR+GG +M EM +LA
Sbjct: 225 GLAAAIAGAKLRKVSKQEEASGGPTAPKAES------------GRSGGGGLMEEMNAMLA 272
Query: 716 ARKKAKEVVKPTGSECTDN 772
R+KA +V + T + + N
Sbjct: 273 RRRKATQVGEKTPKDESAN 291
>sp|Q9NJG9|SUZ12_DROME Polycomb protein Su(z)12 (Suppressor 12 of zeste protein)
Length = 900
Score = 33.9 bits (76), Expect = 0.58
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Frame = +2
Query: 575 RQAKLKSRGGPVEPEVSSNQNKNVTSSATLGRAGGDSMMSEMQRVLAARKKAKEVVKP-T 751
+Q K+ P +P ++Q + +S++T G G S M +R+ A K+ P
Sbjct: 678 KQEDPKTLKSPQKPAPPADQ-ASTSSASTSGSGSGSSSMQPPKRMPAHLKRGSAASSPGV 736
Query: 752 GSECTDNGGSGDNSSKN 802
S+ T+NG +G NSS +
Sbjct: 737 QSKGTENGTNGSNSSSS 753
>sp|P18106|FPS_DROME Tyrosine-protein kinase Fps85D (dFer)
Length = 1325
Score = 33.1 bits (74), Expect = 0.99
Identities = 31/122 (25%), Positives = 52/122 (42%), Gaps = 5/122 (4%)
Frame = +2
Query: 488 LSTITMAK-PFQQNNDSDEESNQSGLASQLRQAKLKSRGGPVEPEVSSNQNKNVTSSATL 664
+ T +AK P Q S S++ + +K +S + + N S + L
Sbjct: 662 IQTRKLAKDPDSQTKRSSSSSSECRSSKDTSHSKKRSLSFSQKSISNIFSNLKEFSKSPL 721
Query: 665 GRAGGDSMMSEMQRVLAARKKAKEVVKPTGSECTDNGGSG----DNSSKNPQWRQNHHRS 832
R G + +++E Q A R + + +GS+C N S +N++KN NH S
Sbjct: 722 VRMGKNHILNEEQD--AKRTQPSQHHHSSGSDCPTNSSSSSSNNNNNNKNTSSNSNHSAS 779
Query: 833 QS 838
QS
Sbjct: 780 QS 781
>sp|Q04279|YMX6_YEAST Hypothetical 105.9 kDa protein in ADH3-RCA1 intergenic region
Length = 960
Score = 32.7 bits (73), Expect = 1.3
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 10/73 (13%)
Frame = +2
Query: 194 TNNYQTQIS--GNTSMPEYALPQKQMQQMNIGSLNNIGDNYAYGA--------TSNSNCN 343
T NY + GN + E+ LP+ ++ ++ LNNI + +Y A N N N
Sbjct: 383 TFNYDNEEKREGNKPVAEHPLPEAEVDDKSVEQLNNISSSGSYSAQGSVENSKPENGNKN 442
Query: 344 MANEYRGSQVEEM 382
+ N+ S +++
Sbjct: 443 LENDTTSSPTQDL 455
>sp|Q9VDW6|DMDA_DROME Dystrophin, isoforms A/C/DLP1/DLP3
Length = 3497
Score = 32.0 bits (71), Expect = 2.2
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 488 LSTITMAKPFQQNNDSDEES-NQSGLASQLRQAKLKSRGGPVEPEVSSNQNKNVTSSAT 661
L+T + AK QQN + S N SGL + + + +L+S +E SSN T++ T
Sbjct: 3426 LNTDSPAKMNQQNGHYEHNSKNSSGLVTVITEQELESINDDLEDSSSSNTTNTTTTTTT 3484
>sp|Q9VDW3|DMDB_DROME Dystrophin, isoform B
Length = 1669
Score = 32.0 bits (71), Expect = 2.2
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +2
Query: 488 LSTITMAKPFQQNNDSDEES-NQSGLASQLRQAKLKSRGGPVEPEVSSNQNKNVTSSAT 661
L+T + AK QQN + S N SGL + + + +L+S +E SSN T++ T
Sbjct: 1598 LNTDSPAKMNQQNGHYEHNSKNSSGLVTVITEQELESINDDLEDSSSSNTTNTTTTTTT 1656
>sp|P0C0R4|LIP_STAES Lipase precursor (Glycerol ester hydrolase)
Length = 688
Score = 31.6 bits (70), Expect = 2.9
Identities = 26/95 (27%), Positives = 36/95 (37%)
Frame = +2
Query: 557 GLASQLRQAKLKSRGGPVEPEVSSNQNKNVTSSATLGRAGGDSMMSEMQRVLAARKKAKE 736
G +S L A L GG + V +S T G+ +SE Q K E
Sbjct: 16 GASSILIAALLFMGGGSAQAAEQQQDKGTVENSTTQSIGDGNEKLSEQQST--QNKNVNE 73
Query: 737 VVKPTGSECTDNGGSGDNSSKNPQWRQNHHRSQSD 841
K + T+N + + KN W Q SQ+D
Sbjct: 74 --KSNVNSITENESLHNETPKNEDWIQQQKDSQND 106
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,814,891
Number of Sequences: 369166
Number of extensions: 1287343
Number of successful extensions: 3937
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3926
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8293644780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)