Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_H21
(721 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P62137|PP1A_MOUSE Serine/threonine protein phosphatase P... 277 2e-74
sp|P62139|PP1A_RABIT Serine/threonine protein phosphatase P... 277 2e-74
sp|Q8WMS6|PP1A_CANFA Serine/threonine protein phosphatase P... 277 2e-74
sp|P48727|YMEX_CAEEL Putative serine/threonine protein phos... 276 4e-74
sp|P48461|PP11_DROME Serine/threonine protein phosphatase a... 271 1e-72
sp|P36873|PP1G_HUMAN Serine/threonine protein phosphatase P... 269 5e-72
sp|P63088|PP1G_RAT Serine/threonine protein phosphatase PP1... 269 5e-72
sp|P36874|PP1G_XENLA Serine/threonine protein phosphatase P... 266 3e-71
sp|P62140|PP1B_HUMAN Serine/threonine protein phosphatase P... 265 1e-70
sp|Q8MJ46|PP1G_CANFA Serine/threonine protein phosphatase P... 263 3e-70
>sp|P62137|PP1A_MOUSE Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 277 bits (709), Expect = 2e-74
Identities = 135/149 (90%), Positives = 137/149 (91%), Gaps = 3/149 (2%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ GWGENDRGVSFTFGAEVVAK
Sbjct: 175 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAK 234
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FLHKHDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 362 ILKPADKKKFPY---NSLNQGSRPITPPR 439
ILKPADK K Y + LN G RPITPPR
Sbjct: 295 ILKPADKNKGKYGQFSGLNPGGRPITPPR 323
>sp|P62139|PP1A_RABIT Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
sp|P62136|PP1A_HUMAN Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
sp|P62138|PP1A_RAT Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 277 bits (709), Expect = 2e-74
Identities = 135/149 (90%), Positives = 137/149 (91%), Gaps = 3/149 (2%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ GWGENDRGVSFTFGAEVVAK
Sbjct: 175 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAK 234
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FLHKHDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 362 ILKPADKKKFPY---NSLNQGSRPITPPR 439
ILKPADK K Y + LN G RPITPPR
Sbjct: 295 ILKPADKNKGKYGQFSGLNPGGRPITPPR 323
>sp|Q8WMS6|PP1A_CANFA Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 277 bits (709), Expect = 2e-74
Identities = 135/149 (90%), Positives = 137/149 (91%), Gaps = 3/149 (2%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ GWGENDRGVSFTFGAEVVAK
Sbjct: 175 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAK 234
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FLHKHDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 362 ILKPADKKKFPY---NSLNQGSRPITPPR 439
ILKPADK K Y + LN G RPITPPR
Sbjct: 295 ILKPADKNKGKYGQFSGLNPGGRPITPPR 323
>sp|P48727|YMEX_CAEEL Putative serine/threonine protein phosphatase F56C9.1 in chromosome
III
Length = 333
Score = 276 bits (706), Expect = 4e-74
Identities = 132/147 (89%), Positives = 138/147 (93%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ GWGENDRGVSFTFG EVVAK
Sbjct: 174 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVTGWGENDRGVSFTFGPEVVAK 233
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FLHKHDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAG+MM+VDETLMCSFQ
Sbjct: 234 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGSMMTVDETLMCSFQ 293
Query: 362 ILKPADKKKFPYNSLNQGS-RPITPPR 439
ILKPADKKK+PY + GS RP+TPPR
Sbjct: 294 ILKPADKKKYPYGAGGVGSNRPVTPPR 320
>sp|P48461|PP11_DROME Serine/threonine protein phosphatase alpha-1 isoform
Length = 327
Score = 271 bits (693), Expect = 1e-72
Identities = 127/146 (86%), Positives = 134/146 (91%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDL SMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+TMGWGENDRGVSFTFGAEVV K
Sbjct: 173 GLSPDLSSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGENDRGVSFTFGAEVVGK 232
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FL KH+ DLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVD+TLMCSFQ
Sbjct: 233 FLQKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDDTLMCSFQ 292
Query: 362 ILKPADKKKFPYNSLNQGSRPITPPR 439
ILKPADK++F Y + RP+TPPR
Sbjct: 293 ILKPADKRRFVYPNFGSSGRPLTPPR 318
>sp|P36873|PP1G_HUMAN Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 269 bits (688), Expect = 5e-72
Identities = 130/146 (89%), Positives = 135/146 (92%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ +GWGENDRGVSFTFGAEVVAK
Sbjct: 175 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAK 234
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FLHKHDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 362 ILKPADKKKFPYNSLNQGSRPITPPR 439
ILKPA+KKK +RP+TPPR
Sbjct: 295 ILKPAEKKK------PNATRPVTPPR 314
>sp|P63088|PP1G_RAT Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
sp|P61287|PP1G_BOVIN Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
sp|P63087|PP1G_MOUSE Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 269 bits (688), Expect = 5e-72
Identities = 130/146 (89%), Positives = 135/146 (92%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ +GWGENDRGVSFTFGAEVVAK
Sbjct: 175 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAK 234
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FLHKHDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 362 ILKPADKKKFPYNSLNQGSRPITPPR 439
ILKPA+KKK +RP+TPPR
Sbjct: 295 ILKPAEKKK------PNATRPVTPPR 314
>sp|P36874|PP1G_XENLA Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G)
Length = 323
Score = 266 bits (681), Expect = 3e-71
Identities = 130/146 (89%), Positives = 134/146 (91%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ +GWGEN RGVSFTFGAEVVAK
Sbjct: 175 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDILGWGENYRGVSFTFGAEVVAK 234
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FLHKHDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 362 ILKPADKKKFPYNSLNQGSRPITPPR 439
ILKPA+KKK SRP+TPPR
Sbjct: 295 ILKPAEKKK------PNASRPVTPPR 314
>sp|P62140|PP1B_HUMAN Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62142|PP1B_RAT Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62143|PP1B_RABIT Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P61292|PP1B_PIG Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62207|PP1B_CHICK Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
sp|P62141|PP1B_MOUSE Serine/threonine protein phosphatase PP1-beta catalytic subunit
(PP-1B)
Length = 327
Score = 265 bits (676), Expect = 1e-70
Identities = 127/147 (86%), Positives = 136/147 (92%), Gaps = 1/147 (0%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPD GLLCDLLWSDPDK+ GWGENDRGVSFTFGA+VV+K
Sbjct: 174 GLSPDLQSMEQIRRIMRPTDVPDTGLLCDLLWSDPDKDVQGWGENDRGVSFTFGADVVSK 233
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FL++HDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAG MMSVDETLMCSFQ
Sbjct: 234 FLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGGMMSVDETLMCSFQ 293
Query: 362 ILKPADKK-KFPYNSLNQGSRPITPPR 439
ILKP++KK K+ Y LN G RP+TPPR
Sbjct: 294 ILKPSEKKAKYQYGGLNSG-RPVTPPR 319
>sp|Q8MJ46|PP1G_CANFA Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 263 bits (672), Expect = 3e-70
Identities = 128/146 (87%), Positives = 133/146 (91%)
Frame = +2
Query: 2 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGENDRGVSFTFGAEVVAK 181
GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ +GWGE DRGVSFTFGAEVVAK
Sbjct: 175 GLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGETDRGVSFTFGAEVVAK 234
Query: 182 FLHKHDLDLICRAHQVVEVGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 361
FLHKHDLDLICRAHQVVE GYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ
Sbjct: 235 FLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAGAMMSVDETLMCSFQ 294
Query: 362 ILKPADKKKFPYNSLNQGSRPITPPR 439
ILKPA+KKK +RP+TP R
Sbjct: 295 ILKPAEKKK------PNATRPVTPLR 314
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,049,375
Number of Sequences: 369166
Number of extensions: 1491505
Number of successful extensions: 3401
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3308
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6413660220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)