Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_H17
(337 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04929|HRPX_PLALO Histidine-rich glycoprotein precursor 47 1e-05
sp|P14586|HRP3_PLAFS Histidine-rich protein 42 6e-04
sp|P04196|HRG_HUMAN Histidine-rich glycoprotein precursor (... 39 0.005
sp|P40349|URB1_USTMA Siderophore biosynthesis regulatory pr... 35 0.071
sp|Q8FFX9|RCNA_ECOL6 Nickel/cobalt efflux system rcnA 35 0.071
sp|Q9NBW1|FRIZ4_DROME Frizzled 4 precursor (Frizzled-4) (dFz4) 34 0.12
sp|Q64733|FOXB2_MOUSE Forkhead box protein B2 (Transcriptio... 32 0.35
sp|Q8C145|S39A6_MOUSE Zinc transporter SLC39A6 precursor (S... 32 0.35
sp|Q8NFD5|ARI1B_HUMAN AT-rich interactive domain-containing... 32 0.46
sp|P76425|RCNA_ECOLI Nickel/cobalt efflux system rcnA 32 0.60
>sp|P04929|HRPX_PLALO Histidine-rich glycoprotein precursor
Length = 351
Score = 47.4 bits (111), Expect = 1e-05
Identities = 21/59 (35%), Positives = 27/59 (45%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
H H L Y +H H + HH +H +HH + H H + HH H H HH H H
Sbjct: 162 HHHHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHH 220
Score = 47.0 bits (110), Expect = 1e-05
Identities = 19/50 (38%), Positives = 25/50 (50%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH + H H +H HH H H GHH H H
Sbjct: 200 HHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHH 249
Score = 46.2 bits (108), Expect = 2e-05
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH H H +H HH H H GHH H H
Sbjct: 190 HHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHH 239
Score = 45.1 bits (105), Expect = 5e-05
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHR--HHIHPDHFVGHHLHI 15
H H + +H GH + HH +H +HH + H H +H HH H H HH H
Sbjct: 220 HHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHH 279
Query: 14 H 12
H
Sbjct: 280 H 280
Score = 44.3 bits (103), Expect = 9e-05
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHR--HHIHPDHFVGHHLHI 15
H H + +H GH + HH +H +HH H H +H HH H H HH H
Sbjct: 210 HHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHH 269
Query: 14 H 12
H
Sbjct: 270 H 270
Score = 43.5 bits (101), Expect = 2e-04
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHR--HHIHPDHFVGHHLHI 15
H H + +H GH + HH H +HH + H H +H HH H H HH H
Sbjct: 230 HHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHH 289
Query: 14 H 12
H
Sbjct: 290 H 290
Score = 43.5 bits (101), Expect = 2e-04
Identities = 19/59 (32%), Positives = 26/59 (44%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
H H + +H H + HH +H +HH + H H + HH H H HH H H
Sbjct: 242 HGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHH 300
Score = 43.1 bits (100), Expect = 2e-04
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHH--IHPDHFVGHHLHI 15
H H + +H H + HH L +H +HH + H H +H HH H H HH H
Sbjct: 93 HHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHHHHH 152
Query: 14 H 12
H
Sbjct: 153 H 153
Score = 42.7 bits (99), Expect = 3e-04
Identities = 22/60 (36%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHP-FYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
H H + +H H + HH +HP F+HH H H H HH H H HH H H
Sbjct: 135 HHHHAAHHHHHEEHH--HHHHAAHHHPWFHHHHLGYHHHHAPHHHHHH--HHAPHHHHHH 190
Score = 42.7 bits (99), Expect = 3e-04
Identities = 18/50 (36%), Positives = 23/50 (46%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH H H +H H H H GHH H H
Sbjct: 180 HHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHH 229
Score = 42.0 bits (97), Expect = 4e-04
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H + +H H + HH +H HH + H H +H HH H D HH H
Sbjct: 215 HHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHH 271
Score = 41.6 bits (96), Expect = 6e-04
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH + H H + HH H H HH H H
Sbjct: 300 HHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHH 349
Score = 41.2 bits (95), Expect = 8e-04
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH + H H + HH H H HH H H
Sbjct: 261 HHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHH 310
Score = 40.8 bits (94), Expect = 0.001
Identities = 19/50 (38%), Positives = 24/50 (48%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H LGH + HH +H HH + H H H HH H +H HH H
Sbjct: 112 HHHLGHHHHHHHAAHHH---HHEEHHHHHHAAHHHH-HEEHHHHHHAAHH 157
Score = 40.8 bits (94), Expect = 0.001
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH + H H + HH H H HH H H
Sbjct: 271 HHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHH 320
Score = 40.8 bits (94), Expect = 0.001
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH + H H + HH H H HH H H
Sbjct: 290 HHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHH 339
Score = 40.4 bits (93), Expect = 0.001
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH + H H + HH H H HH H H
Sbjct: 191 HHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHH 240
Score = 40.0 bits (92), Expect = 0.002
Identities = 17/50 (34%), Positives = 23/50 (46%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH + H H + HH H H HH H H
Sbjct: 201 HHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHH 250
Score = 39.7 bits (91), Expect = 0.002
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYH--PFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHI 15
H H + +H H HH +H P +HH + H +H HH H H HH H
Sbjct: 176 HHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHH 235
Query: 14 H 12
H
Sbjct: 236 H 236
Score = 39.7 bits (91), Expect = 0.002
Identities = 20/61 (32%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYH--PFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHI 15
H H + +H H HH +H P +HH + H +H HH H H HH H
Sbjct: 186 HHHHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHH 245
Query: 14 H 12
H
Sbjct: 246 H 246
Score = 39.7 bits (91), Expect = 0.002
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH H H + HH H H HH H H
Sbjct: 280 HHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHH 329
Score = 39.7 bits (91), Expect = 0.002
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H + ++H H HH +H +HH + HD +H HH H H HH H
Sbjct: 286 HHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHH-HDAHHHHHHHH 341
Score = 39.3 bits (90), Expect = 0.003
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H + +H H HH +H +HH + H +H HH H H HH H
Sbjct: 196 HHHHHHHAPHHHHHHHHAPHHHHHHHHGHHHHHHHHHGHHHHHHHHHGHHHHHHHHH 252
Score = 38.9 bits (89), Expect = 0.004
Identities = 21/62 (33%), Positives = 26/62 (41%), Gaps = 3/62 (4%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHR---HHIHPDHFVGHHLH 18
H H + +H H + HH +H YHH H H +H HH H H HH H
Sbjct: 143 HHHEEHHHHHHAAHHHPWFHH---HHLGYHHHHAPHHHHHHHHAPHHHHHHHHAPHHHHH 199
Query: 17 IH 12
H
Sbjct: 200 HH 201
Score = 38.9 bits (89), Expect = 0.004
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H + ++H H HH +H HH + H H +H HH H H HH H
Sbjct: 266 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHH-HHHDAHHHHHHHDAHHHHHHHH 321
Score = 38.9 bits (89), Expect = 0.004
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH H H +H H H H HH H H
Sbjct: 270 HHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHH 319
Score = 38.9 bits (89), Expect = 0.004
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H + HH +H +HH + H H HH H H HH H H
Sbjct: 281 HHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHH 330
Score = 38.5 bits (88), Expect = 0.005
Identities = 19/57 (33%), Positives = 26/57 (45%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H + ++H H HH +H +HH + HD +H HH H H HH H
Sbjct: 296 HHHHHHHDAHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH-HDAHHHHHHHH 351
Score = 37.7 bits (86), Expect = 0.008
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 4/54 (7%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDH-FVYHRHHIHPDHF---VGHHLHIH 12
+H H + HH H HH + H H +H HH HP H +GHH H H
Sbjct: 69 HHEPHHEEHHHHHPEEHHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHH 122
Score = 37.7 bits (86), Expect = 0.008
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H + ++H H HH +H HH + H H +H HH H D HH H
Sbjct: 256 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHH-HHHDAHHHHHHHHDAHHHHHHH 311
Score = 37.4 bits (85), Expect = 0.011
Identities = 19/65 (29%), Positives = 27/65 (41%), Gaps = 6/65 (9%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYH----PFYHHLRNLHDHFVYHRHHI--HPDHFVGH 27
H H + ++H + HH +H +HH H H +H HH+ H H H
Sbjct: 117 HHHHHHHAAHHHHHEEHHHHHHAAHHHHHEEHHHHHHAAHHHPWFHHHHLGYHHHHAPHH 176
Query: 26 HLHIH 12
H H H
Sbjct: 177 HHHHH 181
Score = 37.4 bits (85), Expect = 0.011
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H + ++H H HH +H HH + HD +H HH H H HH H
Sbjct: 276 HHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHDAHHHHHHH-HDAHHHHHHHH 331
Score = 36.6 bits (83), Expect = 0.019
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H +H H HH +H +HH + HD +H HH H H HH H
Sbjct: 247 HHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH-HDAHHHHHHHH 302
Score = 35.8 bits (81), Expect = 0.032
Identities = 19/57 (33%), Positives = 24/57 (42%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H H +H H HH +H +HH + HD +H HH H H HH H
Sbjct: 237 HHHHHHGHHHHHHHHHDAHHHHHHHHDAHHHHHHHHDAHHHHHHH-HDAHHHHHHHH 292
Score = 34.7 bits (78), Expect = 0.071
Identities = 18/54 (33%), Positives = 22/54 (40%), Gaps = 4/54 (7%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHH----IHPDHFVGHHLHIH 12
+H H + HH H +HH H H + H HH H H HH H H
Sbjct: 85 HHEPHHEEHHHHHPHPHHHHHHHPPHHHHHLGHHHHHHHAAHHHHHEEHHHHHH 138
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 146 HVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H+ HH +HP HH + +H +H H H HH H
Sbjct: 56 HLHEEHHH--HHPEEHHEPHHEEHHHHHPEEHHEPHHEEHHHH 96
>sp|P14586|HRP3_PLAFS Histidine-rich protein
Length = 82
Score = 41.6 bits (96), Expect = 6e-04
Identities = 21/51 (41%), Positives = 24/51 (47%)
Frame = -3
Query: 161 NHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIHR 9
NHR H F+ HH L +H +YHRHH H H HH H HR
Sbjct: 3 NHRYHHYFHRHHHL-------------NHHLYHRHHHHRHH---HHRHHHR 37
Score = 35.4 bits (80), Expect = 0.041
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Frame = -3
Query: 182 HRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYH--RHHIH 48
H F+ +H H+++ HH H +HH R+ H H + H RH IH
Sbjct: 7 HHYFHRHHHLNHHLYHRHH----HHRHHHHRHHHRHQILHQNRHQIH 49
>sp|P04196|HRG_HUMAN Histidine-rich glycoprotein precursor (Histidine-proline-rich
glycoprotein) (HPRG)
Length = 525
Score = 38.5 bits (88), Expect = 0.005
Identities = 23/64 (35%), Positives = 25/64 (39%), Gaps = 5/64 (7%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHH-----TLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 24
H H+ H GH + HH T HP HH H H HH H H GHH
Sbjct: 350 HPHKHHSHEQHPHGHHPHAHHPHEHDTHRQHPHGHHPHGHHPH----GHHPHGHHPHGHH 405
Query: 23 LHIH 12
H H
Sbjct: 406 PHCH 409
Score = 28.1 bits (61), Expect = 6.6
Identities = 17/50 (34%), Positives = 18/50 (36%), Gaps = 10/50 (20%)
Frame = -3
Query: 131 HHTLLYHPFYHHLRNLHDHFVYHRHHIH----------PDHFVGHHLHIH 12
HH +HP HH H H H H H P H GH H H
Sbjct: 384 HHPHGHHPHGHHPHGHHPH--GHHPHCHDFQDYGPCDPPPHNQGHCCHGH 431
>sp|P40349|URB1_USTMA Siderophore biosynthesis regulatory protein URBS1
Length = 950
Score = 34.7 bits (78), Expect = 0.071
Identities = 23/63 (36%), Positives = 25/63 (39%), Gaps = 2/63 (3%)
Frame = -3
Query: 188 HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDH--FVGHHLHI 15
H R RLG V HH H +HH N H V+H HH H H V H
Sbjct: 735 HAARASASDGARLGSVVPHHH----HHHHHHHANHASHAVHHGHHHHHHHPVTVSASSHG 790
Query: 14 HRG 6
H G
Sbjct: 791 HAG 793
>sp|Q8FFX9|RCNA_ECOL6 Nickel/cobalt efflux system rcnA
Length = 274
Score = 34.7 bits (78), Expect = 0.071
Identities = 15/31 (48%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -3
Query: 95 LRNLHDHFVYHRHHIHPDHF-VGHHLHIHRG 6
L N+H+H H HH H DH GHH H G
Sbjct: 117 LENMHEHDHEHHHHDHEDHHDHGHHHHHEHG 147
>sp|Q9NBW1|FRIZ4_DROME Frizzled 4 precursor (Frizzled-4) (dFz4)
Length = 705
Score = 33.9 bits (76), Expect = 0.12
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = -3
Query: 167 ISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHH 24
+SN+ LG +HH + P +HH H +H HH H H H
Sbjct: 628 MSNYSLGRS--VHHQQRHSPHHHH-HQQQQHHQFHPHHNHQHHSTSSH 672
>sp|Q64733|FOXB2_MOUSE Forkhead box protein B2 (Transcription factor FKH-4)
Length = 428
Score = 32.3 bits (72), Expect = 0.35
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = -3
Query: 98 HLRNLHDHFVYHRHHIHPDHFVGHHLHIH 12
HL H H +H HH H H HH H H
Sbjct: 135 HLHPHHPHHAHHHHHHH--HHAAHHHHHH 161
Score = 31.2 bits (69), Expect = 0.78
Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Frame = -3
Query: 128 HTLLYHPFY-HHLRNLHDHFVYHRHHIHP 45
H +HP + HH + H H +H HH HP
Sbjct: 135 HLHPHHPHHAHHHHHHHHHAAHHHHHHHP 163
>sp|Q8C145|S39A6_MOUSE Zinc transporter SLC39A6 precursor (Solute carrier family 39 member
6) (Endoplamic reticulum membrane-linked protein)
(Ermelin)
Length = 765
Score = 32.3 bits (72), Expect = 0.35
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = -3
Query: 146 HVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLHIHR 9
H + HH H H + H+H H HH +H H H HR
Sbjct: 94 HHDHEHHADHEHHSDHEHHSDHEHHSDHEHHSDHEHHSDHEHHSHR 139
Score = 29.6 bits (65), Expect = 2.3
Identities = 16/56 (28%), Positives = 23/56 (41%)
Frame = -3
Query: 200 IQK*HLHRLFYISNHRLGHVFYLHHTLLYHPFYHHLRNLHDHFVYHRHHIHPDHFV 33
I++ H+H H + HH+ H H + H+H H HH H H V
Sbjct: 88 IKRVHIHHDHEHHADHEHHSDHEHHSDHEHHSDHEHHSDHEHHSDHEHHSHRSHTV 143
Score = 27.7 bits (60), Expect = 8.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = -3
Query: 86 LHDHFVYHRHHIHPDHFVGHHLHIH 12
+H H YH H +H H HH H H
Sbjct: 565 IHHHHDYH-HILHHHHHQNHHPHSH 588
>sp|Q8NFD5|ARI1B_HUMAN AT-rich interactive domain-containing protein 1B (ARID
domain-containing protein 1B) (Osa homolog 2) (hOsa2)
(p250R) (BRG1-binding protein hELD/OSA1)
(BRG1-associated factor 250b) (BAF250B)
Length = 2236
Score = 32.0 bits (71), Expect = 0.46
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = -3
Query: 68 YHRHHIHPDHFVGHHLHIHRGL 3
+H HH H H HHLH H L
Sbjct: 85 HHHHHAHHHHHHAHHLHHHHAL 106
Score = 28.9 bits (63), Expect = 3.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 113 HPFYHHLRNLHDHFVYHRHHIHPDHFVGHHLH 18
H +HH + H H +H HH+H H + L+
Sbjct: 81 HQQHHHHHHAHHHH-HHAHHLHHHHALQQQLN 111
>sp|P76425|RCNA_ECOLI Nickel/cobalt efflux system rcnA
Length = 274
Score = 31.6 bits (70), Expect = 0.60
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = -3
Query: 95 LRNLHDHFVYHRHHIHPDHF-VGHHLHIHRG 6
L N+H H H HH H H GHH H G
Sbjct: 117 LENMHGHDYEHHHHDHEHHHDHGHHHHHEHG 147
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 25,545,749
Number of Sequences: 369166
Number of extensions: 445819
Number of successful extensions: 2547
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1420
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2016
length of database: 68,354,980
effective HSP length: 79
effective length of database: 53,760,915
effective search space used: 1720349280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)