Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_H15
(283 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53813|PROS_RAT Vitamin K-dependent protein S precursor 31 0.77
sp|Q08761|PROS_MOUSE Vitamin K-dependent protein S precursor 31 0.77
sp|P98118|PROS_RABIT Vitamin K-dependent protein S precursor 31 1.0
sp|P07225|PROS_HUMAN Vitamin K-dependent protein S precursor 31 1.0
sp|Q28520|PROS_MACMU Vitamin K-dependent protein S precursor 31 1.0
sp|P07224|PROS_BOVIN Vitamin K-dependent protein S precursor 30 1.7
sp|Q14393|GAS6_HUMAN Growth-arrest-specific protein 6 precu... 30 2.3
sp|Q63772|GAS6_RAT Growth-arrest-specific protein 6 precurs... 28 5.0
sp|Q90185|VNCS_AEDEB Noncapsid protein NS-1 (Nonstructural ... 28 6.5
>sp|P53813|PROS_RAT Vitamin K-dependent protein S precursor
Length = 675
Score = 31.2 bits (69), Expect = 0.77
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 130 LLHKCIKRLCQWEDRAWQLNENKPNTDFFYIK 225
L +CI+ LC E+ A ++ EN P TD+FY K
Sbjct: 54 LERECIEELCNKEE-AREVFENNPETDYFYPK 84
>sp|Q08761|PROS_MOUSE Vitamin K-dependent protein S precursor
Length = 675
Score = 31.2 bits (69), Expect = 0.77
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 130 LLHKCIKRLCQWEDRAWQLNENKPNTDFFYIK 225
L +CI+ LC E+ A ++ EN P TD+FY K
Sbjct: 54 LERECIEELCNKEE-AREVFENNPETDYFYPK 84
>sp|P98118|PROS_RABIT Vitamin K-dependent protein S precursor
Length = 646
Score = 30.8 bits (68), Expect = 1.0
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 130 LLHKCIKRLCQWEDRAWQLNENKPNTDFFYIK 225
L +CI+ LC E+ A ++ EN P TD+FY K
Sbjct: 25 LERECIEELCNKEE-AREVFENDPETDYFYPK 55
>sp|P07225|PROS_HUMAN Vitamin K-dependent protein S precursor
Length = 676
Score = 30.8 bits (68), Expect = 1.0
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 130 LLHKCIKRLCQWEDRAWQLNENKPNTDFFYIK 225
L +CI+ LC E+ A ++ EN P TD+FY K
Sbjct: 54 LERECIEELCNKEE-AREVFENDPETDYFYPK 84
>sp|Q28520|PROS_MACMU Vitamin K-dependent protein S precursor
Length = 649
Score = 30.8 bits (68), Expect = 1.0
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +1
Query: 130 LLHKCIKRLCQWEDRAWQLNENKPNTDFFYIK 225
L +CI+ LC E+ A ++ EN P TD+FY K
Sbjct: 27 LERECIEELCNKEE-AREVFENDPETDYFYPK 57
>sp|P07224|PROS_BOVIN Vitamin K-dependent protein S precursor
Length = 675
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +1
Query: 130 LLHKCIKRLCQWEDRAWQLNENKPNTDFFYIK 225
L +CI+ LC E+ A ++ EN P T++FY K
Sbjct: 54 LERECIEELCNKEE-AREIFENNPETEYFYPK 84
>sp|Q14393|GAS6_HUMAN Growth-arrest-specific protein 6 precursor (GAS-6)
Length = 721
Score = 29.6 bits (65), Expect = 2.3
Identities = 13/30 (43%), Positives = 20/30 (66%)
Frame = +1
Query: 130 LLHKCIKRLCQWEDRAWQLNENKPNTDFFY 219
L +C++ LC E+ A ++ EN P TD+FY
Sbjct: 61 LERECVEELCSREE-AREVFENDPETDYFY 89
>sp|Q63772|GAS6_RAT Growth-arrest-specific protein 6 precursor (GAS-6)
(Growth-potentiating factor) (GPF)
Length = 674
Score = 28.5 bits (62), Expect = 5.0
Identities = 12/30 (40%), Positives = 20/30 (66%)
Frame = +1
Query: 130 LLHKCIKRLCQWEDRAWQLNENKPNTDFFY 219
L +C++ +C E+ A ++ EN P TD+FY
Sbjct: 58 LERECVEEVCSKEE-AREVFENDPETDYFY 86
>sp|Q90185|VNCS_AEDEB Noncapsid protein NS-1 (Nonstructural protein NS1) (NCVP1)
Length = 805
Score = 28.1 bits (61), Expect = 6.5
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +1
Query: 10 RLYLLDPVLLHMFDLKFVNDVILVEIFSR----ISFVHFAVTVVLLHKCIKRLCQWEDRA 177
+LY+ + H D +N I ++ SR + +H A+ V K I +L + ED A
Sbjct: 691 KLYIFKKSIQHREDKYTINAQIQNKLISRPPGLVEPIHMAIVFVKNFKEIYKLIEEEDNA 750
Query: 178 WQLNE 192
+NE
Sbjct: 751 HTVNE 755
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,537,173
Number of Sequences: 369166
Number of extensions: 522498
Number of successful extensions: 1299
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1296
length of database: 68,354,980
effective HSP length: 63
effective length of database: 56,716,675
effective search space used: 1701500250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)