Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_H06
(336 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04069|CBPB_ASTFL Carboxypeptidase B 60 2e-09
sp|P42788|CBPZ_SIMVI Zinc carboxypeptidase 47 1e-05
sp|Q7TPZ8|CBPA1_MOUSE Carboxypeptidase A1 precursor 46 3e-05
sp|P00731|CBPA1_RAT Carboxypeptidase A1 precursor 46 3e-05
sp|P00730|CBPA1_BOVIN Carboxypeptidase A1 precursor 45 5e-05
sp|Q6P8K8|CBPA4_MOUSE Carboxypeptidase A4 precursor 44 9e-05
sp|Q9JHH6|CBPB2_MOUSE Carboxypeptidase B2 precursor (Carbox... 44 2e-04
sp|Q96IY4|CBPB2_HUMAN Carboxypeptidase B2 precursor (Carbox... 43 2e-04
sp|P09954|CBPA1_PIG Carboxypeptidase A1 precursor 43 2e-04
sp|O02350|CBPA_ANOGA Zinc carboxypeptidase A precursor 43 2e-04
>sp|P04069|CBPB_ASTFL Carboxypeptidase B
Length = 303
Score = 60.1 bits (144), Expect = 2e-09
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 1/94 (1%)
Frame = +2
Query: 2 NSARGLVPNYETFY-VGSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAG 178
N+ L + T Y +GS +YAAAGG+ DW K + VKYAYT+ELR TG G
Sbjct: 218 NAVDALTAVHGTRYEIGSSTNTIYAAAGGSDDWAKGEGGVKYAYTIELR-----DTGNYG 272
Query: 179 FLAPISYISRSGEEVYAGLLATVQAMTN*TKSKY 280
FL P + I +GEE + G V+ + N K Y
Sbjct: 273 FLLPENQIIPTGEETFEG----VKVVANFVKDTY 302
>sp|P42788|CBPZ_SIMVI Zinc carboxypeptidase
Length = 304
Score = 47.0 bits (110), Expect = 1e-05
Identities = 29/73 (39%), Positives = 38/73 (52%), Gaps = 1/73 (1%)
Frame = +2
Query: 5 SARGLVPNYETFY-VGSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGF 181
+AR L Y T Y VG+ + +Y A+GG+ DW + AYT ELRP G GF
Sbjct: 214 AARSLAQRYGTDYTVGNIYDAIYPASGGSMDWAYDTLDIPIAYTYELRP----RDGWNGF 269
Query: 182 LAPISYISRSGEE 220
P + I +GEE
Sbjct: 270 QLPANQIIPTGEE 282
>sp|Q7TPZ8|CBPA1_MOUSE Carboxypeptidase A1 precursor
Length = 419
Score = 45.8 bits (107), Expect = 3e-05
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +2
Query: 38 FYVGSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGE 217
F GS + +Y A+G DW ++ +KY++T ELR TGL GFL P S I + E
Sbjct: 348 FKYGSIIDTIYQASGSTIDWTYSQG-IKYSFTFELRD-----TGLRGFLLPASQIIPTAE 401
Query: 218 EVYAGLL 238
E + LL
Sbjct: 402 ETWLALL 408
>sp|P00731|CBPA1_RAT Carboxypeptidase A1 precursor
Length = 419
Score = 45.8 bits (107), Expect = 3e-05
Identities = 27/67 (40%), Positives = 37/67 (55%)
Frame = +2
Query: 38 FYVGSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGE 217
F GS + +Y A+G DW ++ +KY++T ELR TGL GFL P S I + E
Sbjct: 348 FKYGSIIDTIYQASGSTIDWTYSQG-IKYSFTFELRD-----TGLRGFLLPASQIIPTAE 401
Query: 218 EVYAGLL 238
E + LL
Sbjct: 402 ETWLALL 408
>sp|P00730|CBPA1_BOVIN Carboxypeptidase A1 precursor
Length = 419
Score = 45.1 bits (105), Expect = 5e-05
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +2
Query: 29 YETFY-VGSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYIS 205
Y T Y GS +Y A+GG+ DW +KY++T ELR TG GFL P S I
Sbjct: 344 YGTSYKYGSIITTIYQASGGSIDW-SYNQGIKYSFTFELR-----DTGRYGFLLPASQII 397
Query: 206 RSGEEVYAGLLATVQAMTN 262
+ +E + G+L ++ N
Sbjct: 398 PTAQETWLGVLTIMEHTLN 416
>sp|Q6P8K8|CBPA4_MOUSE Carboxypeptidase A4 precursor
Length = 420
Score = 44.3 bits (103), Expect = 9e-05
Identities = 31/79 (39%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 2 NSARGLVPNYETFY-VGSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAG 178
N+A+ L T Y VG +Y A+G + DW +KYA+T ELR TG G
Sbjct: 336 NAAQALASLSGTKYRVGPTCTTVYPASGSSVDWAYDNG-IKYAFTFELR-----DTGYYG 389
Query: 179 FLAPISYISRSGEEVYAGL 235
FL P S I + EE + GL
Sbjct: 390 FLLPASQIIPTAEETWLGL 408
>sp|Q9JHH6|CBPB2_MOUSE Carboxypeptidase B2 precursor (Carboxypeptidase U)
(Thrombin-activatable fibrinolysis inhibitor) (TAFI)
(Carboxypeptidase R) (CPR)
Length = 422
Score = 43.5 bits (101), Expect = 2e-04
Identities = 30/71 (42%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Frame = +2
Query: 26 NYETFYV-GSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYI 202
N T Y GS E LY A GG+ DWI +KY++T+ELR TG GFL P YI
Sbjct: 347 NKNTRYTHGSGSESLYLAPGGSDDWI-YDLGIKYSFTIELR-----DTGRYGFLLPERYI 400
Query: 203 SRSGEEVYAGL 235
+ E A +
Sbjct: 401 KPTCAEALAAI 411
>sp|Q96IY4|CBPB2_HUMAN Carboxypeptidase B2 precursor (Carboxypeptidase U)
(Thrombin-activatable fibrinolysis inhibitor) (TAFI)
(Plasma carboxypeptidase B) (pCPB)
Length = 423
Score = 43.1 bits (100), Expect = 2e-04
Identities = 26/63 (41%), Positives = 33/63 (52%)
Frame = +2
Query: 47 GSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGEEVY 226
G E LY A GG DWI +KY++T+ELR TG GFL P YI + E +
Sbjct: 356 GHGSETLYLAPGGGDDWI-YDLGIKYSFTIELR-----DTGTYGFLLPERYIKPTCREAF 409
Query: 227 AGL 235
A +
Sbjct: 410 AAV 412
>sp|P09954|CBPA1_PIG Carboxypeptidase A1 precursor
Length = 419
Score = 43.1 bits (100), Expect = 2e-04
Identities = 26/75 (34%), Positives = 38/75 (50%)
Frame = +2
Query: 38 FYVGSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGFLAPISYISRSGE 217
F GS +Y A+GG DW + +KY+++ ELR TG GFL P S I + +
Sbjct: 348 FQYGSIITTIYQASGGTIDWTYNQ-GIKYSFSFELR-----DTGRYGFLLPASQIIPTAQ 401
Query: 218 EVYAGLLATVQAMTN 262
E + LL ++ N
Sbjct: 402 ETWLALLTIMEHTLN 416
>sp|O02350|CBPA_ANOGA Zinc carboxypeptidase A precursor
Length = 433
Score = 43.1 bits (100), Expect = 2e-04
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Frame = +2
Query: 5 SARGLVPNYETFY-VGSPPELLYAAAGGAYDWIKTKTKVKYAYTLELRPSREYTTGLAGF 181
+ + L Y T Y G+ + +Y A+G + DW VK AYT ELRP + GF
Sbjct: 342 TVKSLAKRYGTQYKYGNVIDAIYPASGSSVDWSYGAQDVKIAYTYELRPDGD---AWNGF 398
Query: 182 LAPISYISRSGEEVYAGLLATVQ 250
+ P + I +GEE L+ ++
Sbjct: 399 VLPPNEIVPTGEETLDSLITLLE 421
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,680,330
Number of Sequences: 369166
Number of extensions: 538534
Number of successful extensions: 1294
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 68,354,980
effective HSP length: 79
effective length of database: 53,760,915
effective search space used: 1720349280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)