Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_F18
(781 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenas... 374 e-103
sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenas... 372 e-103
sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenas... 372 e-103
sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase ... 372 e-103
sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenas... 367 e-101
sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenas... 366 e-101
sp|P04406|G3P2_HUMAN Glyceraldehyde-3-phosphate dehydrogena... 365 e-101
sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenas... 365 e-100
sp|P20287|G3P_SCHMA Glyceraldehyde-3-phosphate dehydrogenas... 364 e-100
sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenas... 363 e-100
>sp|Q28259|G3P_CANFA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 374 bits (959), Expect = e-103
Identities = 182/250 (72%), Positives = 210/250 (84%)
Frame = +3
Query: 30 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 209
KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 62
Query: 210 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 389
GKLV++G ++S++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKSISIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 390 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 569
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181
Query: 570 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 749
TQKTVDGPS K+WRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKMWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 750 DLTCKLKKAA 779
DLTC+L+KAA
Sbjct: 242 DLTCRLEKAA 251
>sp|Q9N2D5|G3P_FELCA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 372 bits (956), Expect = e-103
Identities = 182/250 (72%), Positives = 209/250 (83%)
Frame = +3
Query: 30 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 209
KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAEN 62
Query: 210 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 389
GKLV++G ++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKPITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 390 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 569
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181
Query: 570 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 749
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 750 DLTCKLKKAA 779
DLTC+L+KAA
Sbjct: 242 DLTCRLEKAA 251
>sp|P46406|G3P_RABIT Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 372 bits (955), Expect = e-103
Identities = 183/250 (73%), Positives = 208/250 (83%)
Frame = +3
Query: 30 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 209
KVG+NGFGRIGRLV RAA G VDVVA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAFNSGKVDVVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEN 62
Query: 210 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 389
GKLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 390 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 569
PS DAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSXDAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181
Query: 570 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 749
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 750 DLTCKLKKAA 779
DLTC+L+KAA
Sbjct: 242 DLTCRLEKAA 251
>sp|P00355|G3P_PIG Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 372 bits (954), Expect = e-103
Identities = 182/250 (72%), Positives = 208/250 (83%)
Frame = +3
Query: 30 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 209
KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKFHG V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFHGTVKAEN 62
Query: 210 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 389
GKLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKAITIFQERDPANIKWGDAGATYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 390 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 569
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 181
Query: 570 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 749
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 750 DLTCKLKKAA 779
DLTC+L+K A
Sbjct: 242 DLTCRLEKPA 251
>sp|P00356|G3P_CHICK Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 367 bits (942), Expect = e-101
Identities = 181/250 (72%), Positives = 208/250 (83%)
Frame = +3
Query: 30 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 209
KVG+NGFGRIGRLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAEN 62
Query: 210 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 389
GKLV++GHA++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGHAITIFQERDPSNIKWADAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 390 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 569
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181
Query: 570 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 749
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 750 DLTCKLKKAA 779
DLTC+L+K A
Sbjct: 242 DLTCRLEKPA 251
>sp|P10096|G3P_BOVIN Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 320
Score = 366 bits (939), Expect = e-101
Identities = 179/250 (71%), Positives = 208/250 (83%)
Frame = +3
Query: 30 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 209
KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L YMVYMF+YDSTHGKF+G V+A++
Sbjct: 2 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLHYMVYMFQYDSTHGKFNGTVKAEN 61
Query: 210 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 389
GKLV++G A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 62 GKLVINGKAITIFQERDPANIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 120
Query: 390 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 569
PSADAPMFVMGVNHEKY+ +L IVSNASCTTNCLAPLAKV++DHFGI EGLMTT+HA TA
Sbjct: 121 PSADAPMFVMGVNHEKYNNTLKIVSNASCTTNCLAPLAKVIHDHFGIVEGLMTTVHAITA 180
Query: 570 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 749
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVV
Sbjct: 181 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 240
Query: 750 DLTCKLKKAA 779
DLTC+L+K A
Sbjct: 241 DLTCRLEKPA 250
>sp|P04406|G3P2_HUMAN Glyceraldehyde-3-phosphate dehydrogenase, liver (GAPDH)
Length = 335
Score = 365 bits (937), Expect = e-101
Identities = 178/254 (70%), Positives = 210/254 (82%)
Frame = +3
Query: 18 MTKPKVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHV 197
M K KVG+NGFGRIGRLV RAA G VD+VA+NDPFI+L+YMVYMF+YDSTHGKFHG V
Sbjct: 1 MGKVKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTV 60
Query: 198 EAKDGKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKV 377
+A++GKLV++G+ ++++ +R+P +I W YVVESTGVFTT+EKA AH + AK+V
Sbjct: 61 KAENGKLVINGNPITIFQERDPSKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGG-AKRV 119
Query: 378 VISAPSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIH 557
+ISAPSADAPMFVMGVNHEKYD SL I+SNASCTTNCLAPLAKV++D+FGI EGLMTT+H
Sbjct: 120 IISAPSADAPMFVMGVNHEKYDNSLKIISNASCTTNCLAPLAKVIHDNFGIVEGLMTTVH 179
Query: 558 AYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPD 737
A TATQKTVDGPS KLWRDGRGA QNIIP IPELNGK+TGMAFRVP +
Sbjct: 180 AITATQKTVDGPSGKLWRDGRGALQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTAN 239
Query: 738 VSVVDLTCKLKKAA 779
VSVVDLTC+L+K A
Sbjct: 240 VSVVDLTCRLEKPA 253
>sp|Q05025|G3P_COTJA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 365 bits (936), Expect = e-100
Identities = 180/250 (72%), Positives = 208/250 (83%)
Frame = +3
Query: 30 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 209
KVG+NGFGRIGRLV RAA+ G V VVA+NDPFI+L+YMVYMFKYDSTHG F G V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAVLSGKVQVVAINDPFIDLNYMVYMFKYDSTHGHFKGTVKAEN 62
Query: 210 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 389
GKLV++G+A++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGNAITIFQERDPSNIKWGDAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 390 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 569
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDKSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181
Query: 570 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 749
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 750 DLTCKLKKAA 779
DLTC+L+K A
Sbjct: 242 DLTCRLEKPA 251
>sp|P20287|G3P_SCHMA Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) (Major larval
surface antigen) (P-37)
Length = 338
Score = 364 bits (935), Expect = e-100
Identities = 180/254 (70%), Positives = 206/254 (81%)
Frame = +3
Query: 18 MTKPKVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHV 197
M++ KVGINGFGRIGRLVLRAA K TVDVV++NDPFI+L+YMVYM K DSTHG F G V
Sbjct: 1 MSRAKVGINGFGRIGRLVLRAAFLKNTVDVVSVNDPFIDLEYMVYMIKRDSTHGTFPGEV 60
Query: 198 EAKDGKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKV 377
++GKL V+G +SV+ +R+P IPWD D YVVESTGVFTTI+KA AH KNNRAKKV
Sbjct: 61 STENGKLKVNGKLISVHCERDPANIPWDKDGAEYVVESTGVFTTIDKAQAHIKNNRAKKV 120
Query: 378 VISAPSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIH 557
+ISAPSADAPMFV+GVN Y+ S+S+VSNASCTTNCLAPLAKV++D F I EGLMTT+H
Sbjct: 121 IISAPSADAPMFVVGVNENSYEKSMSVVSNASCTTNCLAPLAKVIHDKFEIVEGLMTTVH 180
Query: 558 AYTATQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPD 737
++TATQK VDGPSSKLWRDGRGA QNIIP IP LNGK+TGMAFRVP PD
Sbjct: 181 SFTATQKVVDGPSSKLWRDGRGAMQNIIPASTGAAKAVGKVIPALNGKLTGMAFRVPTPD 240
Query: 738 VSVVDLTCKLKKAA 779
VSVVDLTC+L K A
Sbjct: 241 VSVVDLTCRLGKGA 254
>sp|P16858|G3P_MOUSE Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
Length = 333
Score = 363 bits (933), Expect = e-100
Identities = 178/250 (71%), Positives = 209/250 (83%)
Frame = +3
Query: 30 KVGINGFGRIGRLVLRAALEKGTVDVVALNDPFIELDYMVYMFKYDSTHGKFHGHVEAKD 209
KVG+NGFGRIGRLV RAA+ G V++VA+NDPFI+L+YMVYMF+YDSTHGKF+G V+A++
Sbjct: 3 KVGVNGFGRIGRLVTRAAICSGKVEIVAINDPFIDLNYMVYMFQYDSTHGKFNGTVKAEN 62
Query: 210 GKLVVDGHAMSVYNKRNPDEIPWDHDHCYYVVESTGVFTTIEKASAHTKNNRAKKVVISA 389
GKLV++G ++++ +R+P I W YVVESTGVFTT+EKA AH K AK+V+ISA
Sbjct: 63 GKLVINGKPITIFQERDPTNIKWGEAGAEYVVESTGVFTTMEKAGAHLKGG-AKRVIISA 121
Query: 390 PSADAPMFVMGVNHEKYDPSLSIVSNASCTTNCLAPLAKVVNDHFGIEEGLMTTIHAYTA 569
PSADAPMFVMGVNHEKYD SL IVSNASCTTNCLAPLAKV++D+FGI EGLMTT+HA TA
Sbjct: 122 PSADAPMFVMGVNHEKYDNSLKIVSNASCTTNCLAPLAKVIHDNFGIVEGLMTTVHAITA 181
Query: 570 TQKTVDGPSSKLWRDGRGAAQNIIPXXXXXXXXXXXXIPELNGKITGMAFRVPVPDVSVV 749
TQKTVDGPS KLWRDGRGAAQNIIP IPELNGK+TGMAFRVP P+VSVV
Sbjct: 182 TQKTVDGPSGKLWRDGRGAAQNIIPASTGAAKAVGKVIPELNGKLTGMAFRVPTPNVSVV 241
Query: 750 DLTCKLKKAA 779
DLTC+L+K A
Sbjct: 242 DLTCRLEKPA 251
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,618,236
Number of Sequences: 369166
Number of extensions: 1970145
Number of successful extensions: 5821
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5369
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 7308943600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)