Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_F05
(795 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 246 4e-65
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 246 4e-65
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 246 4e-65
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 243 4e-64
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 240 3e-63
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 240 3e-63
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 240 4e-63
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 239 6e-63
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 238 1e-62
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 237 3e-62
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 246 bits (629), Expect = 4e-65
Identities = 124/197 (62%), Positives = 143/197 (72%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGR
Sbjct: 450 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR 509
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++
Sbjct: 510 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQK 569
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXX 540
I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 570 ILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGG 629
Query: 541 XXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 630 APPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 246 bits (629), Expect = 4e-65
Identities = 124/197 (62%), Positives = 143/197 (72%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGR
Sbjct: 450 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR 509
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++
Sbjct: 510 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQK 569
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXX 540
I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 570 ILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGG 629
Query: 541 XXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 630 APPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 246 bits (629), Expect = 4e-65
Identities = 124/197 (62%), Positives = 143/197 (72%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGR
Sbjct: 450 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR 509
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+ KI++ D++
Sbjct: 510 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQK 569
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXX 540
I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 570 ILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGG 629
Query: 541 XXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 630 APPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 243 bits (620), Expect = 4e-64
Identities = 124/200 (62%), Positives = 143/200 (71%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGR
Sbjct: 450 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGR 509
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSK+DIERMV +++AKN LESYA+ MK+TVEDEKLK KIS+ D++
Sbjct: 510 LSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQK 569
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXX 531
I+DKC E IGWLDKNQ A ++EF++ KELEKVCNPI+TK+YQ
Sbjct: 570 ILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGF 629
Query: 532 XXXXXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 630 PGAGAAPGGGSSGPTIEEVD 649
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 240 bits (613), Expect = 3e-63
Identities = 122/202 (60%), Positives = 143/202 (70%), Gaps = 5/202 (2%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSA +K TGKENKITITNDKGR
Sbjct: 450 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAADKSTGKENKITITNDKGR 509
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSK+DIERMV ++++KNSLESYA+ MK+TVEDEKL+ KIS+ D+
Sbjct: 510 LSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQGKISDEDKTK 569
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXX 525
I++KC E IGWLDKNQ A K+E+++H KELEKVCNPI+TK+YQ
Sbjct: 570 ILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGF 629
Query: 526 XXXXXXXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 630 PGAGGAAPGGGGSSGPTIEEVD 651
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 240 bits (613), Expect = 3e-63
Identities = 123/200 (61%), Positives = 141/200 (70%), Gaps = 3/200 (1%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGI+NVSAV+K TGKENKITITNDKGR
Sbjct: 450 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVSAVDKSTGKENKITITNDKGR 509
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSK+DIERMV +++AKN LESYA+ MK+TVEDEKLK KIS+ D+
Sbjct: 510 LSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHK 569
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXX 531
I+DKC E I WLDKNQ A KDE+++ K+LEKVCNPI+TK+YQ
Sbjct: 570 ILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGF 629
Query: 532 XXXXXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 630 QELGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 240 bits (612), Expect = 4e-63
Identities = 125/197 (63%), Positives = 140/197 (71%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVSA +K TGK+NKITITNDKGR
Sbjct: 449 TKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVSAQDKSTGKQNKITITNDKGR 508
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSKD+IERMV RIAAKN+LESYA+ MK T+EDEKLKDKISE D+K
Sbjct: 509 LSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKK 568
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXX 540
I +KC E + WLD NQ A KDEF++ KELE VCNPI+TK+YQ
Sbjct: 569 IQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGA 628
Query: 541 XXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 629 PGAGSTG-GGPTIEEVD 644
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 239 bits (610), Expect = 6e-63
Identities = 123/201 (61%), Positives = 143/201 (71%), Gaps = 4/201 (1%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKFEL GIPPAPRGVPQIEVTFDIDANGILNVSAV+K TGKENKITITNDKGR
Sbjct: 450 TKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVSAVDKSTGKENKITITNDKGR 509
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSK+DIERMV ++++KNSL+SYA+ MKATVEDEKL+ KI++ D++
Sbjct: 510 LSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYAFNMKATVEDEKLQGKINDEDKQK 569
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ----XXXXXXXXXXXXX 528
I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 570 ILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGMPGGF 629
Query: 529 XXXXXXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 630 PGGGAPPSGGASSGPTIEEVD 650
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 238 bits (607), Expect = 1e-62
Identities = 121/197 (61%), Positives = 140/197 (71%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKF+L GIPPAPRGVPQIEVTFDIDANGILNV+A +K TGKENKITITNDKGR
Sbjct: 453 TKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGR 512
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSKDDI+RMV R+AAKN+LESY Y +K TVEDEKL+ KISE D+
Sbjct: 513 LSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLRGKISEQDKNK 572
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXX 540
I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 573 ILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------GGPGGGS 622
Query: 541 XXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 623 GGGGSGASGGPTIEEVD 639
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 237 bits (604), Expect = 3e-62
Identities = 120/197 (60%), Positives = 140/197 (71%)
Frame = +1
Query: 1 TKDNNLLGKFELAGIPPAPRGVPQIEVTFDIDANGILNVSAVEKGTGKENKITITNDKGR 180
TKDNNLLGKF+L GIPPAPRGVPQIEVTFDIDANGILNV+A +K TGKENKITITNDKGR
Sbjct: 453 TKDNNLLGKFDLTGIPPAPRGVPQIEVTFDIDANGILNVTAADKSTGKENKITITNDKGR 512
Query: 181 LSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLKDKISESDRKL 360
LSKDDI+RMV R+AAKN++ESY Y +K TVEDEKL+ KISE D+
Sbjct: 513 LSKDDIDRMVQEADGYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLRGKISEQDKNK 572
Query: 361 IVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXX 540
I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 573 ILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------------G 616
Query: 541 XXXXXXXKQGPTVEEVD 591
GPT+EEVD
Sbjct: 617 GPGGGGSSGGPTIEEVD 633
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,991,277
Number of Sequences: 369166
Number of extensions: 905328
Number of successful extensions: 3541
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3351
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7473924075
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)