Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_O17
(553 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase 233 2e-61
sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase 233 2e-61
sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle... 196 3e-50
sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Bra... 196 3e-50
sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A (Mus... 192 5e-49
sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Mus... 192 6e-49
sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscl... 191 8e-49
sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Mus... 191 1e-48
sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain... 189 5e-48
sp|P05063|ALDOC_MOUSE Fructose-bisphosphate aldolase C (Bra... 187 2e-47
>sp|Q9GP32|ALF_ECHMU Fructose-bisphosphate aldolase
Length = 363
Score = 233 bits (595), Expect = 2e-61
Identities = 116/148 (78%), Positives = 127/148 (85%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
ALADHHVYLEGTLLKPNMVT GQSCT KY++E NA ATV+ALQRTVP AV GV FLSGGQ
Sbjct: 216 ALADHHVYLEGTLLKPNMVTCGQSCTKKYSVEDNARATVEALQRTVPVAVPGVVFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE DAT NLNAINKY G+KPW L+FSFGRALQAS + AW+GK ENVKA Q + L LA AN
Sbjct: 276 SELDATRNLNAINKYPGKKPWALSFSFGRALQASAIAAWQGKPENVKAGQAEFLQLAKAN 335
Query: 362 GAAAVGKFDGNLKTAAGGKSLFVANHAY 445
GAA++GKF+G LKTAAG KSLFVANHAY
Sbjct: 336 GAASLGKFEGELKTAAGQKSLFVANHAY 363
>sp|P53442|ALF_SCHMA Fructose-bisphosphate aldolase
Length = 363
Score = 233 bits (594), Expect = 2e-61
Identities = 117/148 (79%), Positives = 126/148 (85%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
ALADHHVYLEGTLLKPNMVTAGQ+C YT ++NA ATV+ALQRTVPPAV G+TFLSGGQ
Sbjct: 216 ALADHHVYLEGTLLKPNMVTAGQACKKAYTPQENALATVRALQRTVPPAVPGITFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE DAT NLN INK G KPW LTFSFGRALQASVL WKGKKENV AAQ++LL LA AN
Sbjct: 276 SELDATKNLNEINKIPGPKPWALTFSFGRALQASVLATWKGKKENVHAAQEELLKLAKAN 335
Query: 362 GAAAVGKFDGNLKTAAGGKSLFVANHAY 445
GAAAVGKF+GN+ T G KSLFVANHAY
Sbjct: 336 GAAAVGKFEGNMGTTLGDKSLFVANHAY 363
>sp|P53445|ALF1_LAMJA Fructose-bisphosphate aldolase, muscle type
Length = 363
Score = 196 bits (498), Expect = 3e-50
Identities = 100/148 (67%), Positives = 116/148 (78%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
AL+DHHVYLEGTLLKPNMVT G + EQ A AT+ AL+RTVPPAV G+TFLSGGQ
Sbjct: 216 ALSDHHVYLEGTLLKPNMVTVGTAAPASTRPEQVAMATLTALRRTVPPAVPGITFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE DA+I+LNAINK H KPW LTFS+GRALQASVL+AW GKKEN+KAAQD+L+ A N
Sbjct: 276 SEEDASIHLNAINKLHLIKPWALTFSYGRALQASVLKAWGGKKENLKAAQDELMRRAKIN 335
Query: 362 GAAAVGKFDGNLKTAAGGKSLFVANHAY 445
G A+ G++ AA G+SLFVANHAY
Sbjct: 336 GQASKGEYKPTGTGAAAGESLFVANHAY 363
>sp|P53448|ALDOC_CARAU Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 196 bits (498), Expect = 3e-50
Identities = 99/148 (66%), Positives = 116/148 (78%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
AL+DHHVYLEGTLLKPNMVTAG SC TK++ ++ A ATV AL+RTVPPAV GVTFLSGGQ
Sbjct: 216 ALSDHHVYLEGTLLKPNMVTAGHSCPTKFSNQEIAMATVTALRRTVPPAVTGVTFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE +A+INLNAIN KPW LTFS+GRALQAS L AW+G KEN KAA ++ L A AN
Sbjct: 276 SEEEASINLNAINNCPLTKPWALTFSYGRALQASALSAWRGVKENEKAATEEFLKRAEAN 335
Query: 362 GAAAVGKFDGNLKTAAGGKSLFVANHAY 445
G AA GK+ + + G+SL+VANHAY
Sbjct: 336 GLAAQGKYVSSGMDGSAGQSLYVANHAY 363
>sp|P00883|ALDOA_RABIT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
Length = 364
Score = 192 bits (488), Expect = 5e-49
Identities = 98/149 (65%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
AL+DHH+YLEGTLLKPNMVT G +CT KY+ E+ A ATV AL+RTVPPAV GVTFLSGGQ
Sbjct: 216 ALSDHHIYLEGTLLKPNMVTPGHACTQKYSHEEIAMATVTALRRTVPPAVTGVTFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE +A+INLNAINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN
Sbjct: 276 SEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALAN 335
Query: 362 GAAAVGKFDGNLKT-AAGGKSLFVANHAY 445
A GK+ + + AA +SLF++NHAY
Sbjct: 336 SLACQGKYTPSGQAGAAASESLFISNHAY 364
>sp|P05064|ALDOA_MOUSE Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Aldolase
1)
Length = 364
Score = 192 bits (487), Expect = 6e-49
Identities = 98/149 (65%), Positives = 119/149 (79%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
AL+DHHVYLEGTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPAV GVTFLSGGQ
Sbjct: 216 ALSDHHVYLEGTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVTGVTFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE +A+INLNAINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN
Sbjct: 276 SEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALAN 335
Query: 362 GAAAVGKFDGNLKT-AAGGKSLFVANHAY 445
A GK+ + ++ AA +SLF++NHAY
Sbjct: 336 SLACQGKYTPSGQSGAAASESLFISNHAY 364
>sp|P05065|ALDOA_RAT Fructose-bisphosphate aldolase A (Muscle-type aldolase)
Length = 364
Score = 191 bits (486), Expect = 8e-49
Identities = 98/149 (65%), Positives = 119/149 (79%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
AL+DHHVYLEGTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPAV GVTFLSGGQ
Sbjct: 216 ALSDHHVYLEGTLLKPNMVTPGHACTQKFSNEEIAMATVTALRRTVPPAVPGVTFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE +A+INLNAINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN
Sbjct: 276 SEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYIKRALAN 335
Query: 362 GAAAVGKFDGNLKT-AAGGKSLFVANHAY 445
A GK+ + ++ AA +SLF++NHAY
Sbjct: 336 SLACQGKYTPSGQSGAAASESLFISNHAY 364
>sp|P04075|ALDOA_HUMAN Fructose-bisphosphate aldolase A (Muscle-type aldolase) (Lung
cancer antigen NY-LU-1)
Length = 364
Score = 191 bits (484), Expect = 1e-48
Identities = 97/149 (65%), Positives = 118/149 (79%), Gaps = 1/149 (0%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
AL+DHH+YLEGTLLKPNMVT G +CT K++ E+ A ATV AL+RTVPPAV G+TFLSGGQ
Sbjct: 216 ALSDHHIYLEGTLLKPNMVTPGHACTQKFSHEEIAMATVTALRRTVPPAVTGITFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE +A+INLNAINK KPW LTFS+GRALQAS L+AW GKKEN+KAAQ++ + A AN
Sbjct: 276 SEEEASINLNAINKCPLLKPWALTFSYGRALQASALKAWGGKKENLKAAQEEYVKRALAN 335
Query: 362 GAAAVGKFDGNLKT-AAGGKSLFVANHAY 445
A GK+ + + AA +SLFV+NHAY
Sbjct: 336 SLACQGKYTPSGQAGAAASESLFVSNHAY 364
>sp|P09117|ALDOC_RAT Fructose-bisphosphate aldolase C (Brain-type aldolase)
Length = 363
Score = 189 bits (479), Expect = 5e-48
Identities = 92/148 (62%), Positives = 115/148 (77%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
AL+DHHVYLEGTLLKPNMVT G +C KY+ E+ A ATV AL+RTVPPAV GVTFLSGGQ
Sbjct: 216 ALSDHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE +A++NLNAIN+ +PW LTFS+GRALQAS L AW+G+++N AA ++ + A N
Sbjct: 276 SEEEASLNLNAINRCSLPRPWALTFSYGRALQASALSAWRGQRDNAGAATEEFIKRAEMN 335
Query: 362 GAAAVGKFDGNLKTAAGGKSLFVANHAY 445
G AA GK++G+ A +SL+VANHAY
Sbjct: 336 GLAAQGKYEGSGDGGAAAQSLYVANHAY 363
>sp|P05063|ALDOC_MOUSE Fructose-bisphosphate aldolase C (Brain-type aldolase) (Aldolase 3)
(Zebrin II) (Scrapie-responsive protein 2)
Length = 363
Score = 187 bits (474), Expect = 2e-47
Identities = 90/148 (60%), Positives = 115/148 (77%)
Frame = +2
Query: 2 ALADHHVYLEGTLLKPNMVTAGQSCTTKYTMEQNAEATVKALQRTVPPAVAGVTFLSGGQ 181
AL+DHHVYLEGTLLKPNMVT G +C KY+ E+ A ATV AL+RTVPPAV GVTFLSGGQ
Sbjct: 216 ALSDHHVYLEGTLLKPNMVTPGHACPIKYSPEEIAMATVTALRRTVPPAVPGVTFLSGGQ 275
Query: 182 SESDATINLNAINKYHGRKPWPLTFSFGRALQASVLEAWKGKKENVKAAQDQLLHLASAN 361
SE +A++NLNAIN+ +PW LTFS+GRALQAS L AW+G+++N AA ++ + A N
Sbjct: 276 SEEEASLNLNAINRCPLPRPWALTFSYGRALQASALNAWRGQRDNAGAATEEFIKRAEMN 335
Query: 362 GAAAVGKFDGNLKTAAGGKSLFVANHAY 445
G AA G+++G+ A +SL++ANHAY
Sbjct: 336 GLAAQGRYEGSGDGGAAAQSLYIANHAY 363
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,803,169
Number of Sequences: 369166
Number of extensions: 1412221
Number of successful extensions: 3812
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3682
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3779
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3882260660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)