Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_O08
(955 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q5ZKY2|APG7L_CHICK Autophagy protein 7-like (APG7-like) ... 283 7e-76
sp|Q9D906|APG7L_MOUSE Autophagy protein 7-like (APG7-like) ... 278 2e-74
sp|O95352|APG7L_HUMAN Autophagy protein 7-like (APG7-like) ... 277 4e-74
sp|Q641Y5|APG7L_RAT Autophagy protein 7-like (APG7-like) (U... 275 1e-73
sp|Q5KC57|ATG7_CRYNE Autophagy-related protein 7 (Autophagy... 251 2e-66
sp|Q52CS0|ATG7_MAGGR Autophagy-related protein 7 (Autophagy... 248 1e-65
sp|Q59PZ3|ATG7_CANAL Autophagy-related protein 7 (Autophagy... 244 3e-64
sp|Q871U2|ATG7_NEUCR Autophagy-related protein 7 (Autophagy... 243 4e-64
sp|O43069|ATG7_SCHPO Autophagy-related protein 7 (Autophagy... 240 4e-63
sp|Q756G8|ATG7_ASHGO Autophagy-related protein 7 (Autophagy... 233 8e-61
>sp|Q5ZKY2|APG7L_CHICK Autophagy protein 7-like (APG7-like) (Ubiquitin-activating enzyme
E1-like protein)
Length = 709
Score = 283 bits (723), Expect = 7e-76
Identities = 152/317 (47%), Positives = 206/317 (64%), Gaps = 6/317 (1%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNKVN-KAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWEN 177
+SYSNPVRQ LY++ED ++ KA A + L++I+P N +GY +S+PMPGHP++ E
Sbjct: 396 ISYSNPVRQPLYEFEDCLSGGKPKALAAAERLQKIFPGVNSEGYNMSIPMPGHPVNFSEV 455
Query: 178 NVSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMR 357
++Q +D L L+ HDV+FLL+DTRE+RWLP + KLVINAALGFDT++VMR
Sbjct: 456 TMAQARKDVATLEELIDAHDVVFLLMDTRESRWLPAVIAASKRKLVINAALGFDTFVVMR 515
Query: 358 HGVAPQPGISPSSQYTKSVASGDASGKTN---KPKPNYVPGDELGCYFCTDVVGPSNSTR 528
HG+ P Q T + A G ++ + +PG +LGCYFC DVV P +STR
Sbjct: 516 HGLK-----KPKQQETGNACFSTAPGPSDLLGSSLFSNIPGYKLGCYFCNDVVAPGDSTR 570
Query: 529 DRSMDQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAVEANRDNY-DFVSCLGTTPH 705
DR++DQQCTV+RPG++MIA ALAVELMVSVLQH +G A ++ D + + LG PH
Sbjct: 571 DRTLDQQCTVSRPGLAMIAGALAVELMVSVLQHPEGGYAVASSSDDRMNEPPTSLGLVPH 630
Query: 706 QIRGYMSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDP-DYLEDVAGLKE 882
QIRG++S F++V P A CTACS KVLD Y+ +GF FL KVFN +LED+ GL
Sbjct: 631 QIRGFLSRFDNVLPVSLAFDKCTACSPKVLDQYEREGFNFLAKVFNSSHSFLEDLTGLTL 690
Query: 883 LQSSIDFDCVTALTDSD 933
L + ++D +
Sbjct: 691 LHQETQAAEIWDMSDDE 707
>sp|Q9D906|APG7L_MOUSE Autophagy protein 7-like (APG7-like) (Ubiquitin-activating enzyme
E1-like protein) (mAGP7)
Length = 698
Score = 278 bits (710), Expect = 2e-74
Identities = 149/316 (47%), Positives = 202/316 (63%), Gaps = 5/316 (1%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNKVN-KAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWEN 177
+SYSNPVRQ LY++ED + KA A + L++I+P N +G+ +S+PMPGHP++ +
Sbjct: 386 ISYSNPVRQPLYEFEDCLGGGKPKALAAAERLQKIFPGVNARGFNMSIPMPGHPVNFSDV 445
Query: 178 NVSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMR 357
+ Q D +L L+ NHDVIFLL+DTRE+RWLPT+ KLVINAALGFDT++VMR
Sbjct: 446 TMEQARRDVEQLEQLIDNHDVIFLLMDTRESRWLPTVIAASKRKLVINAALGFDTFVVMR 505
Query: 358 HGVAPQPGISPSSQYTKSVASGDASGKTNKPKPNY--VPGDELGCYFCTDVVGPSNSTRD 531
HG+ P Q + + + +PG +LGCYFC DVV P +STRD
Sbjct: 506 HGLK-----KPKQQGAGDLCPSHLVAPADLGSSLFANIPGYKLGCYFCNDVVAPGDSTRD 560
Query: 532 RSMDQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAVEANRDNY-DFVSCLGTTPHQ 708
R++DQQCTV+RPG+++IA ALAVELMVSVLQH +G A ++ D + + LG PHQ
Sbjct: 561 RTLDQQCTVSRPGLAVIAGALAVELMVSVLQHPEGGYAIASSSDDRMNEPPTSLGLVPHQ 620
Query: 709 IRGYMSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDP-DYLEDVAGLKEL 885
IRG++S F++V P A CTACS KVLD Y+ +GF FL KVFN +LED+ GL L
Sbjct: 621 IRGFLSRFDNVLPVSLAFDKCTACSPKVLDQYEREGFTFLAKVFNSSHSFLEDLTGLTLL 680
Query: 886 QSSIDFDCVTALTDSD 933
+ ++D +
Sbjct: 681 HQETQAAEIWDMSDEE 696
>sp|O95352|APG7L_HUMAN Autophagy protein 7-like (APG7-like) (Ubiquitin-activating enzyme
E1-like protein) (hAGP7)
Length = 703
Score = 277 bits (708), Expect = 4e-74
Identities = 150/315 (47%), Positives = 203/315 (64%), Gaps = 4/315 (1%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNKVN-KAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWEN 177
+SYSNPVRQ LY++ED + KA A L++I+P N +G+ +S+PMPGHP++
Sbjct: 390 ISYSNPVRQPLYEFEDCLGGGKPKALAAADRLQKIFPGVNARGFNMSIPMPGHPVNFSSV 449
Query: 178 NVSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMR 357
+ Q D +L L+ +HDV+FLL+DTRE+RWLP + KLVINAALGFDT++VMR
Sbjct: 450 TLEQARRDVEQLEQLIESHDVVFLLMDTRESRWLPAVIAASKRKLVINAALGFDTFVVMR 509
Query: 358 HGV-APQPGISPSSQYTKSVASGDASGKTNKPKPNYVPGDELGCYFCTDVVGPSNSTRDR 534
HG+ P+ + VAS D G + +PG +LGCYFC DVV P +STRDR
Sbjct: 510 HGLKKPKQQGAGDLCPNHPVASADLLGSSLFAN---IPGYKLGCYFCNDVVAPGDSTRDR 566
Query: 535 SMDQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAVEANRDNY-DFVSCLGTTPHQI 711
++DQQCTV+RPG+++IA ALAVELMVSVLQH +G A ++ D + + LG PHQI
Sbjct: 567 TLDQQCTVSRPGLAVIAGALAVELMVSVLQHPEGGYAIASSSDDRMNEPPTSLGLVPHQI 626
Query: 712 RGYMSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDP-DYLEDVAGLKELQ 888
RG++S F++V P A CTACS KVLD Y+ +GF FL KVFN +LED+ GL L
Sbjct: 627 RGFLSRFDNVLPVSLAFDKCTACSSKVLDQYEREGFNFLAKVFNSSHSFLEDLTGLTLLH 686
Query: 889 SSIDFDCVTALTDSD 933
+ ++D +
Sbjct: 687 QETQAAEIWDMSDDE 701
>sp|Q641Y5|APG7L_RAT Autophagy protein 7-like (APG7-like) (Ubiquitin-activating enzyme
E1-like protein)
Length = 698
Score = 275 bits (704), Expect = 1e-73
Identities = 148/316 (46%), Positives = 201/316 (63%), Gaps = 5/316 (1%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNKVN-KAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWEN 177
+SYSNPVRQ LY++ED + KA A + L++I+P N G+ +S+PMPGHP++ +
Sbjct: 386 ISYSNPVRQPLYEFEDCLGGGKPKALAAAERLQKIFPGVNASGFNMSIPMPGHPVNFSDV 445
Query: 178 NVSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMR 357
+ Q D +L L+ +HDVIFLL+DTRE+RWLPT+ KLVINAALGFDT++VMR
Sbjct: 446 TMEQARRDVEQLEELIDSHDVIFLLMDTRESRWLPTVIAASKRKLVINAALGFDTFVVMR 505
Query: 358 HGVAPQPGISPSSQYTKSVASGDASGKTNKPKPNY--VPGDELGCYFCTDVVGPSNSTRD 531
HG+ P Q + + + +PG +LGCYFC DVV P +STRD
Sbjct: 506 HGLK-----KPKQQGAGDLCPSHLVAPADLGSSLFANIPGYKLGCYFCNDVVAPGDSTRD 560
Query: 532 RSMDQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAVEANRDNY-DFVSCLGTTPHQ 708
R++DQQCTV+RPG+++IA ALAVELMVSVLQH +G A ++ D + + LG PHQ
Sbjct: 561 RTLDQQCTVSRPGLAVIAGALAVELMVSVLQHPEGGYAIASSSDDRMNEPPTSLGLVPHQ 620
Query: 709 IRGYMSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDP-DYLEDVAGLKEL 885
IRG++S F++V P A CTACS KVLD Y+ +GF FL KVFN +LED+ GL L
Sbjct: 621 IRGFLSRFDNVLPVSLAFDKCTACSSKVLDQYEQEGFTFLAKVFNSSHSFLEDLTGLTLL 680
Query: 886 QSSIDFDCVTALTDSD 933
+ ++D +
Sbjct: 681 HQETQAAEIWDMSDEE 696
>sp|Q5KC57|ATG7_CRYNE Autophagy-related protein 7 (Autophagy-related E1-like-activating
enzyme ATG7)
Length = 675
Score = 251 bits (641), Expect = 2e-66
Identities = 142/300 (47%), Positives = 184/300 (61%), Gaps = 5/300 (1%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNK-VNKAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWEN 177
VSYSNPVRQ L+ + D +N + KA A K L+EI+P N +G L +PMPGHP+S ++
Sbjct: 374 VSYSNPVRQPLFTFSDCLNGGLPKAPTAAKKLQEIFPGVNAQGVVLGIPMPGHPISSSDD 433
Query: 178 NVSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMR 357
VE+D KL LV +HD +FLL+D+RE+RWLPT+ G K+V+NAALGFD++LVMR
Sbjct: 434 ---AVEKDVAKLEALVKSHDAVFLLMDSRESRWLPTVLGRKWGKVVVNAALGFDSFLVMR 490
Query: 358 HGVAPQPGISPSSQYTKSVASGDASGKTNKPKPNYVPGDELGCYFCTDVVGPSNSTRDRS 537
HG G + + S D G K LGCY+C D+V P++S DR+
Sbjct: 491 HGAGAGAG-------ARRIQS-DEGGVGEKG---------LGCYYCNDIVAPTDSLSDRT 533
Query: 538 MDQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAVE----ANRDNYDFVSCLGTTPH 705
+DQ CTVTRPGV+ IAAA+AVEL++SVLQH G A E A S LG PH
Sbjct: 534 LDQMCTVTRPGVAPIAAAMAVELLISVLQHPLGVHAPAERPDTAETSTSTKTSPLGCVPH 593
Query: 706 QIRGYMSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDPDYLEDVAGLKEL 885
Q+RG M + + A CT CS VL+ Y+ +GF FL +VFN+ DYLE V GL EL
Sbjct: 594 QLRGQMYQWKTQIVEGEAFDRCTGCSDYVLNEYETNGFAFLRRVFNEKDYLEKVTGLDEL 653
>sp|Q52CS0|ATG7_MAGGR Autophagy-related protein 7 (Autophagy-related E1-like-activating
enzyme ATG7)
Length = 718
Score = 248 bits (634), Expect = 1e-65
Identities = 138/324 (42%), Positives = 195/324 (60%), Gaps = 11/324 (3%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNK-VNKAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWEN 177
VS+SNPVRQ L+++ED ++ V KA +A ++LK+I P +G+ LSVPM GHP+
Sbjct: 417 VSFSNPVRQPLFEFEDCLSGGVPKAPKAAEALKKINPGVEAEGHVLSVPMLGHPVL---- 472
Query: 178 NVSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMR 357
N +Q +ED KL L+ HDV+FLL+DTRE+RWLPT+ G K+V+NAALGFDTY+VMR
Sbjct: 473 NEAQTKEDFEKLQQLIKAHDVVFLLMDTRESRWLPTVMGKAEGKIVMNAALGFDTYVVMR 532
Query: 358 HGVAPQPGISPSSQYTKSVASGDASGKTNKPKPNYVPGDELGCYFCTDVVGPSNSTRDRS 537
HG AP+ G + LGCYFC DVV PS+S +D++
Sbjct: 533 HGAAPKDGTEST----------------------------LGCYFCNDVVAPSDSMKDQT 564
Query: 538 MDQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAV----------EANRDNYDFVSC 687
+DQQCTVTRPGV+ IA+A+ VE++ SVLQH A E RD D
Sbjct: 565 LDQQCTVTRPGVAAIASAMLVEMLTSVLQHPQREHAPAPKATGPPGNPEYQRDPPD--HA 622
Query: 688 LGTTPHQIRGYMSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDPDYLEDV 867
LG PHQ+RG+++ F ++ + +C+ACS ++ YK+DG+EF+ K +D DY+ ++
Sbjct: 623 LGIVPHQVRGFLANFQNMIISGESYPNCSACSSPIVGAYKSDGWEFVKKALSDKDYVLEL 682
Query: 868 AGLKELQSSIDFDCVTALTDSDDD 939
+GL E+Q + D D+D
Sbjct: 683 SGLAEVQRQAEAMQNEVDWDEDED 706
>sp|Q59PZ3|ATG7_CANAL Autophagy-related protein 7 (Autophagy-related E1-like-activating
enzyme ATG7)
Length = 639
Score = 244 bits (623), Expect = 3e-64
Identities = 133/321 (41%), Positives = 191/321 (59%), Gaps = 6/321 (1%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNKVNKAE----QAEKSLKEIYPHANVKGYTLSVPMPGHPLSQ 168
+S+SNPVRQ L+ +ED + + E +A ++LK ++P + KG L+VPM GHP++
Sbjct: 350 ISFSNPVRQPLFNFEDCFSDSGQGEYKALRAAENLKRVFPGVDAKGICLAVPMVGHPVTD 409
Query: 169 WENNVSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYL 348
E+ + E +KLF HDVIFLL+D+RE+RWLPT+ G + K+VINAALGFD+YL
Sbjct: 410 -EHKERENYETLVKLFE---EHDVIFLLMDSRESRWLPTLIGAANEKIVINAALGFDSYL 465
Query: 349 VMRHGVAPQPGISPSSQYTKSVASGDASGKTNKPKPNYVPGDELGCYFCTDVVGPSNSTR 528
VMRHGV Q D LGCY+C DVV P++S
Sbjct: 466 VMRHGVTNQK-------------------------------DRLGCYYCNDVVAPNDSLS 494
Query: 529 DRSMDQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAVEANRDNYDFVSCLGTTPHQ 708
DR++DQ CTVTRPG +++A++LAVEL+V++LQH + N A +D + G PHQ
Sbjct: 495 DRTLDQMCTVTRPGGALMASSLAVELLVAILQHPERNLAP-------HDAETKFGNIPHQ 547
Query: 709 IRGYMSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDPDYLEDVAGLKELQ 888
IRG++ F F + +HC+ACS +V+ +K +G+EF+ K +D YLED++GL ++Q
Sbjct: 548 IRGFLHNFQQTKLFAPSYVHCSACSPRVITEFKQEGWEFVRKCLDDSQYLEDISGLTKVQ 607
Query: 889 SSIDFDCVTALTD--SDDDFS 945
+ L D DDD S
Sbjct: 608 QEAELAAKQLLEDLSLDDDVS 628
>sp|Q871U2|ATG7_NEUCR Autophagy-related protein 7 (Autophagy-related E1-like-activating
enzyme atg-7)
Length = 699
Score = 243 bits (621), Expect = 4e-64
Identities = 138/307 (44%), Positives = 186/307 (60%), Gaps = 11/307 (3%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNKVN-KAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWEN 177
VSYSNPVRQ L+K+ED N KA QA ++LKEIYP +V+GY LSVPM H + +
Sbjct: 398 VSYSNPVRQPLFKFEDCHNGGKPKAIQAAEALKEIYPGVDVEGYALSVPMLDHAI----H 453
Query: 178 NVSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMR 357
N ++ + D KL L+ +HD IFLL+DTRE+RWLPT+ G K+V+NAALGFDTY+VMR
Sbjct: 454 NEAKTKADFDKLKELIDSHDAIFLLMDTRESRWLPTLMGKAANKIVMNAALGFDTYVVMR 513
Query: 358 HGVAPQPGISPSSQYTKSVASGDASGKTNKPKPNYVPGDELGCYFCTDVVGPSNSTRDRS 537
HG AP G + LGCYFC DVV ++S +D++
Sbjct: 514 HGAAPNDGSE----------------------------ETLGCYFCNDVVVAADSMKDQT 545
Query: 538 MDQQCTVTRPGVSMIAAALAVELMVSVLQH----------KDGNKAAVEANRDNYDFVSC 687
+DQQCTVTRPGV+ IA+AL VEL+ S+LQH G +AV RD D
Sbjct: 546 LDQQCTVTRPGVAAIASALLVELLTSILQHPLKQHAPAPVSTGTGSAVSYERDPPDHP-- 603
Query: 688 LGTTPHQIRGYMSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDPDYLEDV 867
LG PHQ+RG++S F ++ ++ C+ACS+ +LD YK G+EF+ DY+ ++
Sbjct: 604 LGLVPHQVRGFLSNFQNMVIRGKSYPQCSACSKPILDAYKEGGWEFVKTALASRDYVAEL 663
Query: 868 AGLKELQ 888
+GL E+Q
Sbjct: 664 SGLAEVQ 670
>sp|O43069|ATG7_SCHPO Autophagy-related protein 7 (Autophagy-related E1-like-activating
enzyme atg7)
Length = 649
Score = 240 bits (613), Expect = 4e-63
Identities = 132/297 (44%), Positives = 183/297 (61%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNKVNKAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWENN 180
VSYSNPVRQ+L+ +ED K+ KAE A + LKEIYP+ GY +S+PM GHP+ +E
Sbjct: 370 VSYSNPVRQSLFTFEDCKRKLPKAECAAQRLKEIYPNMFSTGYNISIPMLGHPI--YEAG 427
Query: 181 VSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMRH 360
+ + D L NL++ HD IFLL DTRE+RWLPT+ KL+IN+ALGFD++LVMRH
Sbjct: 428 IEKTMHDYETLENLISTHDAIFLLTDTRESRWLPTVISTAMDKLLINSALGFDSWLVMRH 487
Query: 361 GVAPQPGISPSSQYTKSVASGDASGKTNKPKPNYVPGDELGCYFCTDVVGPSNSTRDRSM 540
G Q K N+ LGCYFC D+ PSNS DR++
Sbjct: 488 GSVLQ--------------------KENR----------LGCYFCNDIFAPSNSLVDRTL 517
Query: 541 DQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAVEANRDNYDFVSCLGTTPHQIRGY 720
DQ CTVTR G + IA A+AVEL VS+LQH +G+ A V N D + LG PHQIRG+
Sbjct: 518 DQTCTVTRSGCANIATAIAVELFVSLLQHPNGHAAPV-LNEDQ----TVLGELPHQIRGF 572
Query: 721 MSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDPDYLEDVAGLKELQS 891
+ F+ + A C+ACS+ +++ + + + F+L+ N+PDY+E++ GL+E+Q+
Sbjct: 573 LHNFSLMKISGMAYPQCSACSECIINEWNREKWMFVLRAINEPDYVEELCGLREVQA 629
>sp|Q756G8|ATG7_ASHGO Autophagy-related protein 7 (Autophagy-related E1-like-activating
enzyme ATG7)
Length = 625
Score = 233 bits (593), Expect = 8e-61
Identities = 133/316 (42%), Positives = 178/316 (56%)
Frame = +1
Query: 1 VSYSNPVRQTLYKYEDSVNKVNKAEQAEKSLKEIYPHANVKGYTLSVPMPGHPLSQWENN 180
VSYSNPVRQ L+ + D KA A ++K I+P + G+ L VPM GHPL+
Sbjct: 350 VSYSNPVRQPLFNFTDCGQP--KATSAAAAMKAIFPLVDATGFQLEVPMIGHPLTDEARQ 407
Query: 181 VSQVEEDCLKLFNLVANHDVIFLLLDTREARWLPTMFGYIHAKLVINAALGFDTYLVMRH 360
EE L L+ +HD++FLL+D+RE RWLPT+ G + +KLVINAALGFD+YLVMRH
Sbjct: 408 KKDYEE----LRQLIRDHDIVFLLMDSRETRWLPTILGNLESKLVINAALGFDSYLVMRH 463
Query: 361 GVAPQPGISPSSQYTKSVASGDASGKTNKPKPNYVPGDELGCYFCTDVVGPSNSTRDRSM 540
G QP S LGCYFC DVV PS+S DR++
Sbjct: 464 GNYEQPESS-----------------------------RLGCYFCHDVVAPSDSLTDRTL 494
Query: 541 DQQCTVTRPGVSMIAAALAVELMVSVLQHKDGNKAAVEANRDNYDFVSCLGTTPHQIRGY 720
D+ CTVTRPGV++IAAA A EL VSVLQH GN A + S LG+ PHQ+RG+
Sbjct: 495 DEMCTVTRPGVALIAAAYATELAVSVLQHPQGNNAPETSE-------SVLGSVPHQLRGF 547
Query: 721 MSCFNSVTPFHRASIHCTACSQKVLDHYKADGFEFLLKVFNDPDYLEDVAGLKELQSSID 900
+ ++V A HC+ACS ++D + +G+EFL + D +E ++GL ++Q +
Sbjct: 548 LPQLSTVKLRTPAYKHCSACSSVIVDAVRENGWEFLREALVDHRIVERLSGLAQVQQETE 607
Query: 901 FDCVTALTDSDDDFSK 948
T DD F +
Sbjct: 608 TFLATMEISDDDCFDE 623
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,504,132
Number of Sequences: 369166
Number of extensions: 2297358
Number of successful extensions: 6883
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6389
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6821
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 9856975370
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)