Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_N08
(392 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 119 3e-27
sp|P55063|HS70L_RAT Heat shock 70 kDa protein 1L (Heat shoc... 117 8e-27
sp|P16627|HS70L_MOUSE Heat shock 70 kDa protein 1L (Heat sh... 116 2e-26
sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70) 115 2e-26
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 115 3e-26
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 114 7e-26
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 113 1e-25
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 113 1e-25
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 113 1e-25
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 113 2e-25
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 119 bits (297), Expect = 3e-27
Identities = 57/113 (50%), Positives = 73/113 (64%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
K+RI AKN LESYA+ MK TIEDEKLKDKISE D+K+I ++C E + WL+ NQ A K+EF
Sbjct: 532 KDRIAAKNALESYAFNMKQTIEDEKLKDKISEEDKKKIQEKCDETVRWLDGNQTAEKDEF 591
Query: 183 DYHYKDLEKLCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXKRQGPTVEEVD 341
++ K+LE +CNPI+TK+YQ GPT+EEVD
Sbjct: 592 EHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTGGGPTIEEVD 644
>sp|P55063|HS70L_RAT Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa protein 3) (HSP70.3)
Length = 641
Score = 117 bits (293), Expect = 8e-27
Identities = 59/113 (52%), Positives = 74/113 (65%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
+E+I AKN LESYA+ MKS + DE LKDKISESD+K+I+D+C E +SWLE NQ A KEEF
Sbjct: 535 REKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCSEVLSWLEANQLAEKEEF 594
Query: 183 DYHYKDLEKLCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXKRQGPTVEEVD 341
D+ K+LE +CNPI+TK+YQ GPT+EEVD
Sbjct: 595 DHKRKELENMCNPIITKLYQ------SGCTGPTCAPGYTPGRAATGPTIEEVD 641
>sp|P16627|HS70L_MOUSE Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa-like protein 1) (Spermatid-specific
heat shock protein 70)
Length = 641
Score = 116 bits (290), Expect = 2e-26
Identities = 58/113 (51%), Positives = 74/113 (65%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
+E+I AKN LESYA+ MKS + DE LKDKISESD+K+I+D+C E +SWLE NQ A K+EF
Sbjct: 535 REKIAAKNALESYAFNMKSAVGDEGLKDKISESDKKKILDKCNEVLSWLEANQLAEKDEF 594
Query: 183 DYHYKDLEKLCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXKRQGPTVEEVD 341
D+ K+LE +CNPI+TK+YQ GPT+EEVD
Sbjct: 595 DHKRKELENMCNPIITKLYQ------SGCTGPTCTPGYTPGRAATGPTIEEVD 641
>sp|P08106|HSP70_CHICK Heat shock 70 kDa protein (HSP70)
Length = 634
Score = 115 bits (289), Expect = 2e-26
Identities = 56/113 (49%), Positives = 76/113 (67%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
++R+GAKN LESY Y MK T+EDEKLK KIS+ D+++++D+CQE IS L++NQ A KEE+
Sbjct: 536 RDRVGAKNSLESYTYNMKQTVEDEKLKGKISDQDKQKVLDKCQEVISSLDRNQMAEKEEY 595
Query: 183 DYHYKDLEKLCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXKRQGPTVEEVD 341
++ K+LEKLCNPI+TK+YQ GPT+EEVD
Sbjct: 596 EHKQKELEKLCNPIVTKLYQGAGGAGAGGSG--------------GPTIEEVD 634
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 115 bits (288), Expect = 3e-26
Identities = 56/117 (47%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
++++ AKN LESYA+ MKST+EDEKLK KIS+ D+ +I+D+C E ISWL+KNQ A K+E+
Sbjct: 533 RDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKHKILDKCNEVISWLDKNQTAEKDEY 592
Query: 183 DYHYKDLEKLCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXK----RQGPTVEEVD 341
++ KDLEK+CNPI+TK+YQ GPT+EEVD
Sbjct: 593 EHQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 114 bits (285), Expect = 7e-26
Identities = 55/117 (47%), Positives = 76/117 (64%), Gaps = 4/117 (3%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
++++ AKN LESYA+ MKST+EDEKLK KIS+ D+++I+D+C E I WL+KNQ A +EEF
Sbjct: 533 RDKVSAKNGLESYAFNMKSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAEREEF 592
Query: 183 DYHYKDLEKLCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXK----RQGPTVEEVD 341
++ K+LEK+CNPI+TK+YQ GPT+EEVD
Sbjct: 593 EHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 113 bits (283), Expect = 1e-25
Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
++++ +KN LESYA+ MK+T+EDEKL+ KI++ D+++I+D+C E ISWL+KNQ A KEEF
Sbjct: 533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEF 592
Query: 183 DYHYKDLEKLCNPIMTKMYQ-XXXXXXXXXXXXXXXXXXXXXXKRQGPTVEEVD 341
++ K+LEK+CNPI+TK+YQ GPT+EEVD
Sbjct: 593 EHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 113 bits (283), Expect = 1e-25
Identities = 53/114 (46%), Positives = 77/114 (67%), Gaps = 1/114 (0%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
++++ +KN LESYA+ MK+T+EDEKL+ KI++ D+++I+D+C E ISWL+KNQ A KEEF
Sbjct: 533 RDKVSSKNSLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEKEEF 592
Query: 183 DYHYKDLEKLCNPIMTKMYQ-XXXXXXXXXXXXXXXXXXXXXXKRQGPTVEEVD 341
++ K+LEK+CNPI+TK+YQ GPT+EEVD
Sbjct: 593 EHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 113 bits (283), Expect = 1e-25
Identities = 53/113 (46%), Positives = 74/113 (65%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
+E+I AKN LESYA+ MKS++ED+ +K KIS+ D+K++VDRC + ISWLE NQ KEE+
Sbjct: 535 REKIAAKNSLESYAFNMKSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDKEEY 594
Query: 183 DYHYKDLEKLCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXKRQGPTVEEVD 341
++ K+LEK+C PI+TK+YQ QGPT+EE+D
Sbjct: 595 EHQLKELEKVCQPIITKLYQ---QGGMPTGCCGDQARTSSGDSSQGPTIEEID 644
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 113 bits (282), Expect = 2e-25
Identities = 58/113 (51%), Positives = 72/113 (63%)
Frame = +3
Query: 3 KERIGAKNLLESYAYQMKSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATKEEF 182
K+RIGAKN LESYA+ +K TIEDEKLKDKIS D+K+I D+C E + WL+ NQ A KEEF
Sbjct: 534 KDRIGAKNGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEKEEF 593
Query: 183 DYHYKDLEKLCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXKRQGPTVEEVD 341
++ KDLE L NPI++K+YQ GPT+EEVD
Sbjct: 594 EHQQKDLEGLANPIISKLYQSAGGAPPGAAPGGAAGGAG------GPTIEEVD 640
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 35,327,886
Number of Sequences: 369166
Number of extensions: 570924
Number of successful extensions: 2726
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2527
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2624
length of database: 68,354,980
effective HSP length: 96
effective length of database: 50,620,420
effective search space used: 1721094280
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)