Planarian EST Database


Dr_sW_020_N06

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_020_N06
         (544 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q27409|FP1_MYTGA  Adhesive plaque matrix protein precurso...    32   0.76 
sp|Q25460|FP1_MYTED  Adhesive plaque matrix protein (Polyphe...    32   1.00 
sp|P13744|11SB_CUCMA  11S globulin beta subunit precursor [C...    31   1.7  
sp|Q25434|FP1_MYTCO  Adhesive plaque matrix protein precurso...    30   3.8  
>sp|Q27409|FP1_MYTGA Adhesive plaque matrix protein precursor (Foot protein 1) (MGFP1)
           (MGFP-1)
          Length = 751

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP+TY  +PSY
Sbjct: 283 PSYPSTYKAKPSYPPTYKAKPSYPPTYK-AKPTYPSTYKAKPSY 325

 Score = 32.3 bits (72), Expect = 0.76
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPV---AAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   YP    A P YP TY  +PSY
Sbjct: 633 PSYPPTYKAKPSYPPTYKAKPSYPATYPSTYKAKPSYPPTYKAKPSY 679

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 19/44 (43%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P + T Y  A P YP TY  +PSY
Sbjct: 393 PSYLPTYKAKPSYPPTYKAKPRYPTTYK-AKPSYPPTYKAKPSY 435

 Score = 31.6 bits (70), Expect = 1.3
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS +  Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 493 PSYSSTYKAKPSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 535

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ ++ Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 553 PSYPQTYKAKSSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 595

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
 Frame = +2

Query: 272 YENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           Y+ +  Y P Y A P++ T Y  A P YP+TY  +PSY
Sbjct: 259 YKPKISYPPTYKAKPSYPTSYR-AKPSYPSTYKAKPSY 295

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P + + Y  A P YP TY  +PSY
Sbjct: 293 PSYPPTYKAKPSYPPTYKAKPTYPSTYK-AKPSYPPTYKAKPSY 335

 Score = 30.8 bits (68), Expect = 2.2
 Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 11/54 (20%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGY-----------IAPAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +T Y P Y             P++  IY  A P YP TY  +PSY
Sbjct: 343 PSYPPSYKPKTTYPPSYKPKISYPPTYKAKPSYPPIYK-AKPSYPPTYKAKPSY 395

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 433 PSYPPTYKAKLSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 475

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 503 PSYPPTYKAKPSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 545

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 573 PSYPPTYKAKPSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 615

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 583 PSYPPTYKAKPSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 625

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 593 PSYPPTYKAKPSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 635

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 603 PSYPPTYKAKPSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 645

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 613 PSYPPTYKAKPSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 655

 Score = 29.3 bits (64), Expect = 6.5
 Identities = 17/44 (38%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y   Y A P++++ Y  A P YP TY  +PSY
Sbjct: 473 PSYPPTYKTKPSYPRTYKAKPSYSSTYK-AKPSYPPTYKAKPSY 515
>sp|Q25460|FP1_MYTED Adhesive plaque matrix protein (Polyphenolic adhesive protein)
           (Foot protein 1) (MEFP1)
          Length = 875

 Score = 32.0 bits (71), Expect = 1.00
 Identities = 18/44 (40%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP+TY  +PSY
Sbjct: 605 PSYPPTYKAKPSYPPTYKAKPSYPPTYK-AKPTYPSTYKAKPSY 647

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPV-----AAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y       A P YP+TY  +PSY
Sbjct: 175 PSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYKAKPTYPSTYKAKPSY 223

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/44 (40%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 285 PSYPPTYKAKPSYPPTYKAKPSYPPTYK-AKPSYPPTYKAKPSY 327

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPV-----AAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y       A P YP+TY  +PSY
Sbjct: 315 PSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPTYKAKPTYPSTYKAKPSY 363

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPV-----AAPVYPATYTYEPSY 382
           P+    Y+ +  Y P Y A P++   Y       A P YP+TY  +PSY
Sbjct: 423 PTYPSTYKAKPSYPPSYKAKPSYPPTYKAKPTYKAKPTYPSTYKAKPSY 471

 Score = 30.4 bits (67), Expect = 2.9
 Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 6/49 (12%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIA-PAHTTIYPV-----AAPVYPATYTYEPSY 382
           PS    Y+ +  Y P Y A P++   Y       A P YP+TY  +PSY
Sbjct: 559 PSYPPTYKAKPSYPPTYKAKPSYPPTYKAKPSYKAKPTYPSTYKAKPSY 607

 Score = 28.9 bits (63), Expect = 8.4
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
 Frame = +2

Query: 272 YENRTVYEPGYIA-PAHTTIYPVAAPVYPATYTYEPSY 382
           Y+ +  Y P Y A P++   Y  A P YP TY  +PSY
Sbjct: 535 YKPKISYPPTYKAKPSYPATYK-AKPSYPPTYKAKPSY 571
>sp|P13744|11SB_CUCMA 11S globulin beta subunit precursor [Contains: 11S globulin gamma
           chain (11S globulin acidic chain); 11S globulin delta
           chain (11S globulin basic chain)]
          Length = 480

 Score = 31.2 bits (69), Expect = 1.7
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -1

Query: 319 MCRSNISRFVYSAIFINYCLAWTASLVDRCSSWVNNGSWIIVSHNY 182
           M RS++  F+  A+FIN CL    S +++ S W   GS +   H Y
Sbjct: 1   MARSSLFTFLCLAVFINGCL----SQIEQQSPWEFQGSEVWQQHRY 42
>sp|Q25434|FP1_MYTCO Adhesive plaque matrix protein precursor (Foot protein 1) (MCFP1)
          Length = 872

 Score = 30.0 bits (66), Expect = 3.8
 Identities = 16/43 (37%), Positives = 19/43 (44%)
 Frame = +2

Query: 254 PSQTIIYENRTVYEPGYIAPAHTTIYPVAAPVYPATYTYEPSY 382
           PS    Y+ +T Y P Y           A P YP TY  +PSY
Sbjct: 716 PSYPASYKRKTSYPPTYKPKISYPSTYKAKPSYPPTYKPKPSY 758
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45,751,239
Number of Sequences: 369166
Number of extensions: 699929
Number of successful extensions: 2190
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2112
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3734833040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)