Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_M06
(742 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P20798|TXP1_PYETR Toxin TxP-I precursor (Tox34) 32 2.3
sp|Q07338|TXPH_PYETR Toxin tox21A precursor (Insect-selecti... 30 5.2
sp|Q9VVN6|CP312_DROME Probable cytochrome P450 312a1 (CYPCC... 30 6.8
sp|P32949|LIP5_CANRU Lipase 5 precursor 30 8.8
sp|P16415|ZF36_HUMAN Zinc finger protein ZFP-36 30 8.8
>sp|P20798|TXP1_PYETR Toxin TxP-I precursor (Tox34)
Length = 279
Score = 31.6 bits (70), Expect = 2.3
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 2/48 (4%)
Frame = -3
Query: 176 QSMDCIAMDYLD--HP*N*LEQ*LDSDQYWHRLISECNCMDCFAHIGC 39
+S+ + +DY D HP N ++ + D YW+ + DCF +IGC
Sbjct: 33 ESVRAVVIDYCDIRHPNNLCKKHFEIDSYWN------DDTDCFTNIGC 74
>sp|Q07338|TXPH_PYETR Toxin tox21A precursor (Insect-selective neurotoxin TxP-I homolog)
Length = 289
Score = 30.4 bits (67), Expect = 5.2
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 3/60 (5%)
Frame = -3
Query: 173 SMDCIAMDYLD--HP*N*LEQ*LDSDQYWHRLISECNCMDCFAHIGCH-HNAHHILTGSA 3
S + +DY D HP N ++ + D YW+ + DCF +IGC + I+ G A
Sbjct: 39 SKRAVVIDYCDTRHPNNLCKKYFEIDSYWN------DDTDCFTNIGCKVYGGFDIIGGKA 92
>sp|Q9VVN6|CP312_DROME Probable cytochrome P450 312a1 (CYPCCCXIIA1)
Length = 510
Score = 30.0 bits (66), Expect = 6.8
Identities = 15/45 (33%), Positives = 24/45 (53%)
Frame = +2
Query: 182 VCGQDKSATSSLCKLYYSDYMEMGAFSTAKFIPDGPTLNIQYTAN 316
VCG+DKS S+ ++ +++E T + P GP + TAN
Sbjct: 349 VCGKDKSEPISIEQVRQLEFLEACIKETLRMYPSGPLTARKATAN 393
>sp|P32949|LIP5_CANRU Lipase 5 precursor
Length = 549
Score = 29.6 bits (65), Expect = 8.8
Identities = 24/108 (22%), Positives = 37/108 (34%), Gaps = 15/108 (13%)
Frame = +2
Query: 167 PCSEMVCGQDKSATSSLCKLYYSD---------YMEMGAFSTAKFIPDGPTLNIQYTANR 319
P + G+ + S LC L ++ G + +P P T
Sbjct: 215 PSKVTIFGESAGSMSVLCHLLWNGGDNTYKGKPLFRAGIMQSGAMVPSDPVDGTYGTQIY 274
Query: 320 DSAFTST------MKLVCNENIDAQVDYIREASDNPGYLEYLQLQSKY 445
D+ ST KL C + Q + +D PG+L Y L+ Y
Sbjct: 275 DTLVASTGCSSASNKLACLRGLSTQA-LLDATNDTPGFLSYTSLRLSY 321
>sp|P16415|ZF36_HUMAN Zinc finger protein ZFP-36
Length = 582
Score = 29.6 bits (65), Expect = 8.8
Identities = 13/33 (39%), Positives = 20/33 (60%)
Frame = -2
Query: 522 NIINSTSPTLNPFFVGFTGFIVRKHAYLDCNWR 424
+I+N +P +NP G G +V H+ L+CN R
Sbjct: 120 SIVNKNTPRVNPCDSGECGEVVLGHSSLNCNIR 152
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,269,246
Number of Sequences: 369166
Number of extensions: 1947140
Number of successful extensions: 4878
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 4680
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4877
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6679696800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)