Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_M03
(539 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 152 4e-37
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 152 4e-37
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 152 4e-37
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 150 2e-36
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 149 4e-36
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 149 6e-36
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 148 9e-36
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 147 2e-35
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 147 2e-35
sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 (... 147 2e-35
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 152 bits (385), Expect = 4e-37
Identities = 77/147 (52%), Positives = 95/147 (64%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+
Sbjct: 500 KITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQ 559
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXX 361
KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 560 GKINDEDKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619
Query: 362 XXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 620 GMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 152 bits (385), Expect = 4e-37
Identities = 77/147 (52%), Positives = 95/147 (64%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+
Sbjct: 500 KITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQ 559
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXX 361
KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 560 GKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619
Query: 362 XXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 620 GMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 152 bits (385), Expect = 4e-37
Identities = 77/147 (52%), Positives = 95/147 (64%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSK+DIERMV ++++KNSLESYA+ MKATVEDEKL+
Sbjct: 500 KITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNMKATVEDEKLQ 559
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXX 361
KI++ D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 560 GKINDEDKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPG 619
Query: 362 XXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 620 GMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 150 bits (378), Expect = 2e-36
Identities = 78/150 (52%), Positives = 95/150 (63%), Gaps = 3/150 (2%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSK+DIERMV +++AKN LESYA+ MK+TVEDEKLK
Sbjct: 500 KITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLK 559
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXX 352
KIS+ D++ I+DKC E IGWLDKNQ A ++EF++ KELEKVCNPI+TK+YQ
Sbjct: 560 GKISDEDKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPG 619
Query: 353 XXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 620 GMPEGMPGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 149 bits (376), Expect = 4e-36
Identities = 80/147 (54%), Positives = 92/147 (62%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSKD+IERMV RIAAKN+LESYA+ MK T+EDEKLK
Sbjct: 499 KITITNDKGRLSKDEIERMVQEAEKYKADDEAQKDRIAAKNALESYAFNMKQTIEDEKLK 558
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXX 361
DKISE D+K I +KC E + WLD NQ A KDEF++ KELE VCNPI+TK+YQ
Sbjct: 559 DKISEEDKKKIQEKCDETVRWLDGNQTAEKDEFEHRQKELESVCNPIITKLYQSAGGMPG 618
Query: 362 XXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 619 GMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 149 bits (375), Expect = 6e-36
Identities = 77/152 (50%), Positives = 96/152 (63%), Gaps = 5/152 (3%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSK+DIERMV ++++KNSLESYA+ MK+TVEDEKL+
Sbjct: 500 KITITNDKGRLSKEDIERMVQEAEKYKCEDDVQRDKVSSKNSLESYAFNMKSTVEDEKLQ 559
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ-----XX 346
KIS+ D+ I++KC E IGWLDKNQ A K+E+++H KELEKVCNPI+TK+YQ
Sbjct: 560 GKISDEDKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPG 619
Query: 347 XXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 620 GMPEGMAGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 148 bits (373), Expect = 9e-36
Identities = 77/147 (52%), Positives = 93/147 (63%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSKDDI+RMV R+AAKN+LESY Y +K TVEDEKL+
Sbjct: 503 KITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNALESYTYNIKQTVEDEKLR 562
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXX 361
KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 563 GKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ------- 615
Query: 362 XXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 616 ---GGPGGGSGGGGSGASGGPTIEEVD 639
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 147 bits (371), Expect = 2e-35
Identities = 77/150 (51%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSK+DIERMV +++AKN LESYA+ MK+TVEDEKLK
Sbjct: 500 KITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNMKSTVEDEKLK 559
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXX 352
KIS+ D+ I+DKC E I WLDKNQ A KDE+++ K+LEKVCNPI+TK+YQ
Sbjct: 560 GKISDEDKHKILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPG 619
Query: 353 XXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 620 GMPDGMPGGFQELGAAPGGGSSGPTIEEVD 649
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 147 bits (370), Expect = 2e-35
Identities = 76/147 (51%), Positives = 93/147 (63%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSKDDI+RMV R+AAKN++ESY Y +K TVEDEKL+
Sbjct: 503 KITITNDKGRLSKDDIDRMVQEADGYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLR 562
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXX 361
KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 563 GKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ------- 615
Query: 362 XXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 616 ---------GGPGGGGSSGGPTIEEVD 633
>sp|P17156|HSP72_MOUSE Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
Length = 633
Score = 147 bits (370), Expect = 2e-35
Identities = 76/147 (51%), Positives = 93/147 (63%)
Frame = +2
Query: 2 KITITNDKGRLSKDDIERMVAXXXXXXXXXXXXXXRIAAKNSLESYAYQMKATVEDEKLK 181
KITITNDKGRLSKDDI+RMV R+AAKN++ESY Y +K TVEDEKL+
Sbjct: 503 KITITNDKGRLSKDDIDRMVQEAERYKSEDEANRDRVAAKNAVESYTYNIKQTVEDEKLR 562
Query: 182 DKISESDRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXX 361
KISE D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 563 GKISEQDKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ------- 615
Query: 362 XXXXXXXXXXXXXXXXXKQGPTVEEVD 442
GPT+EEVD
Sbjct: 616 ---------GGPGGGGSSGGPTIEEVD 633
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 36,224,615
Number of Sequences: 369166
Number of extensions: 460371
Number of successful extensions: 1709
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1528
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1565
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3685690500
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)