Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_M02
(196 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q10344|TCTP_SCHPO Translationally-controlled tumor prote... 70 2e-12
sp|P13693|TCTP_HUMAN Translationally-controlled tumor prote... 70 2e-12
sp|Q5E984|TCTP_BOVIN Translationally-controlled tumor prote... 70 2e-12
sp|P43348|TCTP_RABIT Translationally-controlled tumor prote... 70 2e-12
sp|Q66JC5|TCTP_XENTR Translationally-controlled tumor prote... 69 3e-12
sp|P43347|TCTP_CHICK Translationally-controlled tumor prote... 68 6e-12
sp|Q7ZYF2|TCTP_XENLA Translationally-controlled tumor prote... 67 1e-11
sp|P63029|TCTP_RAT Translationally-controlled tumor protein... 66 2e-11
sp|Q9DGK4|TCTP_BRARE Translationally-controlled tumor prote... 65 5e-11
sp|Q6XSH4|TCTP_LATJA Translationally-controlled tumor prote... 65 6e-11
>sp|Q10344|TCTP_SCHPO Translationally-controlled tumor protein homolog (TCTP) (p23fyp)
Length = 168
Score = 69.7 bits (169), Expect = 2e-12
Identities = 30/44 (68%), Positives = 36/44 (81%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEK 134
NFK+Y FY GE+M+P+AMV+L NYRED ITPY I FKDG+ EK
Sbjct: 124 NFKDYDFYIGESMDPDAMVVLMNYREDGITPYMIFFKDGLVSEK 167
>sp|P13693|TCTP_HUMAN Translationally-controlled tumor protein (TCTP) (p23)
(Histamine-releasing factor) (HRF) (Fortilin)
sp|P61288|TCTP_PIG Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 69.7 bits (169), Expect = 2e-12
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
NFK Y+F+ GE MNP+ MV L +YRED +TPY I FKDG+E EKC
Sbjct: 128 NFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172
>sp|Q5E984|TCTP_BOVIN Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 69.7 bits (169), Expect = 2e-12
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
NFK Y+F+ GE MNP+ MV L +YRED +TPY I FKDG+E EKC
Sbjct: 128 NFKNYQFFIGENMNPDGMVALLDYREDGVTPYMIFFKDGLEMEKC 172
>sp|P43348|TCTP_RABIT Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 69.7 bits (169), Expect = 2e-12
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
NFK Y+FY GE MNP+ MV L +YRED +TP+ I FKDG+E EKC
Sbjct: 128 NFKNYQFYIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172
>sp|Q66JC5|TCTP_XENTR Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 69.3 bits (168), Expect = 3e-12
Identities = 29/45 (64%), Positives = 35/45 (77%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
NFK Y+FYTGE MNP+ MV L +YRED +TP+ I FKDG+ EKC
Sbjct: 128 NFKNYQFYTGERMNPDGMVALLDYREDGVTPFMIFFKDGLISEKC 172
>sp|P43347|TCTP_CHICK Translationally-controlled tumor protein (TCTP) (p23) (pCHK23)
Length = 172
Score = 68.2 bits (165), Expect = 6e-12
Identities = 28/45 (62%), Positives = 35/45 (77%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
NFK Y+F+ GE MNP+ MV L ++RED +TPY I FKDG+E EKC
Sbjct: 128 NFKNYQFFVGENMNPDGMVALLDFREDGVTPYMIFFKDGLEIEKC 172
>sp|Q7ZYF2|TCTP_XENLA Translationally-controlled tumor protein (TCTP)
Length = 172
Score = 67.4 bits (163), Expect = 1e-11
Identities = 30/45 (66%), Positives = 35/45 (77%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
NFK Y+FYTGE MNP+ MV L +YRED ITP+ I FKDG+ EKC
Sbjct: 128 NFKNYQFYTGERMNPDGMVGLLDYREDGITPFMIFFKDGLIIEKC 172
>sp|P63029|TCTP_RAT Translationally-controlled tumor protein (TCTP) (Lens epithelial
protein)
sp|P63028|TCTP_MOUSE Translationally-controlled tumor protein (TCTP) (p23) (21 kDa
polypeptide) (p21)
Length = 172
Score = 66.2 bits (160), Expect = 2e-11
Identities = 27/45 (60%), Positives = 34/45 (75%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
NF Y+F+ GE MNP+ MV L +YRED +TP+ I FKDG+E EKC
Sbjct: 128 NFNNYQFFIGENMNPDGMVALLDYREDGVTPFMIFFKDGLEMEKC 172
>sp|Q9DGK4|TCTP_BRARE Translationally-controlled tumor protein (TCTP)
Length = 171
Score = 65.1 bits (157), Expect = 5e-11
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
N K ++F+TGE+MNP+ M+ L ++RED +TPY I FKDG+E EKC
Sbjct: 127 NIKNFQFFTGESMNPDGMIGLLDFREDGVTPYMIFFKDGLEIEKC 171
>sp|Q6XSH4|TCTP_LATJA Translationally-controlled tumor protein (TCTP)
Length = 170
Score = 64.7 bits (156), Expect = 6e-11
Identities = 28/45 (62%), Positives = 33/45 (73%)
Frame = +3
Query: 3 NFKEYKFYTGETMNPEAMVILCNYREDQITPYFIVFKDGIEEEKC 137
N K Y+F+TGE MNPE MV L +YRED TPY + FKDG+ EKC
Sbjct: 126 NLKNYQFFTGENMNPEGMVGLLDYREDGTTPYMLFFKDGLLAEKC 170
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,060,001
Number of Sequences: 369166
Number of extensions: 337522
Number of successful extensions: 680
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 677
length of database: 68,354,980
effective HSP length: 36
effective length of database: 61,704,520
effective search space used: 1727726560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)