Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_J09
(909 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P60891|PRPS1_HUMAN Ribose-phosphate pyrophosphokinase I ... 313 4e-85
sp|Q9D7G0|PRPS1_MOUSE Ribose-phosphate pyrophosphokinase I ... 313 6e-85
sp|Q4R4R7|PRPS2_MACFA Ribose-phosphate pyrophosphokinase II... 311 2e-84
sp|P09330|PRPS2_RAT Ribose-phosphate pyrophosphokinase II (... 311 2e-84
sp|Q9CS42|PRPS2_MOUSE Ribose-phosphate pyrophosphokinase II... 311 2e-84
sp|P21108|PRPS3_HUMAN Ribose-phosphate pyrophosphokinase II... 305 9e-83
sp|P38063|KPR4_YEAST Probable ribose-phosphate pyrophosphok... 248 2e-65
sp|P38689|KPR3_YEAST Ribose-phosphate pyrophosphokinase 3 (... 248 2e-65
sp|P38620|KPR2_YEAST Ribose-phosphate pyrophosphokinase 2 (... 245 1e-64
sp|P46585|KPR1_CANAL Ribose-phosphate pyrophosphokinase 1 (... 242 1e-63
>sp|P60891|PRPS1_HUMAN Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I) (PPRibP)
sp|P60892|PRPS1_RAT Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I)
Length = 318
Score = 313 bits (802), Expect = 4e-85
Identities = 156/302 (51%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYID 185
NI++FSGSS+ L++KI +R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG +
Sbjct: 3 NIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGE 62
Query: 186 VNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGAN 365
+N++LMELLIMINACK AS++R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+
Sbjct: 63 INDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGAD 122
Query: 366 HIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMA 545
HIITMDLHASQIQGFF++PVDNL +E + WI++NIS+W TI S + A+RV ++A
Sbjct: 123 HIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIA 182
Query: 546 NTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAA 719
+ L V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA
Sbjct: 183 DRLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGAT 242
Query: 720 GVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAIRR 899
VY I THG+ S + ++++ +VVTNTI QE +K KI +D+S+I AEAIRR
Sbjct: 243 RVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRR 302
Query: 900 IH 905
H
Sbjct: 303 TH 304
>sp|Q9D7G0|PRPS1_MOUSE Ribose-phosphate pyrophosphokinase I (Phosphoribosyl pyrophosphate
synthetase I) (PRS-I)
Length = 318
Score = 313 bits (801), Expect = 6e-85
Identities = 156/302 (51%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYID 185
NI++FSGSS+ L++KI +R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG +
Sbjct: 3 NIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIGESVRGEDVYIVQSGCGE 62
Query: 186 VNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGAN 365
+N++LMELLIMINACK AS++R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+
Sbjct: 63 INDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGAD 122
Query: 366 HIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMA 545
HIITMDLHASQIQGFF++PVDNL +E + WI++NIS+W TI S + A+RV ++A
Sbjct: 123 HIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIA 182
Query: 546 NTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAA 719
L V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA
Sbjct: 183 ERLNVDFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGAT 242
Query: 720 GVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAIRR 899
VY I THG+ S + ++++ +VVTNTI QE +K KI +D+S+I AEAIRR
Sbjct: 243 RVYAILTHGIFSGPAISRINNACFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRR 302
Query: 900 IH 905
H
Sbjct: 303 TH 304
>sp|Q4R4R7|PRPS2_MACFA Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
sp|P11908|PRPS2_HUMAN Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II) (PPRibP)
Length = 318
Score = 311 bits (797), Expect = 2e-84
Identities = 155/302 (51%), Positives = 224/302 (74%), Gaps = 2/302 (0%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYID 185
NI LFSGSS+ L++++ +R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG +
Sbjct: 3 NIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGE 62
Query: 186 VNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGAN 365
+N++LMELLIMINACK ASS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+
Sbjct: 63 INDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGAD 122
Query: 366 HIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMA 545
HIITMDLHASQIQGFF++PVDNL +E + WI++NI++W+ I S + A+RV ++A
Sbjct: 123 HIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENIAEWKNCIIVSPDAGGAKRVTSIA 182
Query: 546 NTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAA 719
+ L V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA
Sbjct: 183 DRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGAT 242
Query: 720 GVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAIRR 899
VY I THG+ S + ++++ +VVTNTI QE +K KI +D+S+I AEAIRR
Sbjct: 243 KVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCTKIQVIDISMILAEAIRR 302
Query: 900 IH 905
H
Sbjct: 303 TH 304
>sp|P09330|PRPS2_RAT Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
Length = 318
Score = 311 bits (797), Expect = 2e-84
Identities = 155/302 (51%), Positives = 223/302 (73%), Gaps = 2/302 (0%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYID 185
NI LFSGSS+ L++++ +R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG +
Sbjct: 3 NIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGE 62
Query: 186 VNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGAN 365
+N++LMELLIMINACK ASS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+
Sbjct: 63 INDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGAD 122
Query: 366 HIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMA 545
HIITMDLHASQIQGFF++PVDNL +E + WI++NI++W I S + A+RV ++A
Sbjct: 123 HIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTSIA 182
Query: 546 NTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAA 719
+ L V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA
Sbjct: 183 DRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGAT 242
Query: 720 GVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAIRR 899
VY I THG+ S + ++++ +VVTNTI QE +K KI +D+S+I AEAIRR
Sbjct: 243 KVYAILTHGIFSGPAISRINNAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRR 302
Query: 900 IH 905
H
Sbjct: 303 TH 304
>sp|Q9CS42|PRPS2_MOUSE Ribose-phosphate pyrophosphokinase II (Phosphoribosyl pyrophosphate
synthetase II) (PRS-II)
Length = 318
Score = 311 bits (796), Expect = 2e-84
Identities = 155/302 (51%), Positives = 222/302 (73%), Gaps = 2/302 (0%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYID 185
NI LFSGSS+ L++++ +R+G++L + + KFSN ETSV+I ESVRG+DV+I+QSG +
Sbjct: 3 NIVLFSGSSHQDLSQRVADRLGLELGKVVTKKFSNQETSVEIGESVRGEDVYIIQSGCGE 62
Query: 186 VNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGAN 365
+N++LMELLIMINACK ASS+R+TAV+P PY+RQ KKD +R PI+AKLVA++L +AGA+
Sbjct: 63 INDNLMELLIMINACKIASSSRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVAGAD 122
Query: 366 HIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMA 545
HIITMDLHASQIQGFF++PVDNL +E + WI++NI++W I S + A+RV ++A
Sbjct: 123 HIITMDLHASQIQGFFDIPVDNLYAEPAVLQWIRENITEWRNCIIVSPDAGGAKRVTSIA 182
Query: 546 NTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAA 719
+ L V F LI+ E+K+A+E +++LVGDV R+A+++ D+ D C + + +L GA
Sbjct: 183 DRLNVEFALIHKERKKANEVDRMVLVGDVKDRVAILVDDMADTCGTICHAADKLLSAGAT 242
Query: 720 GVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAIRR 899
VY I THG+ S + ++ + +VVTNTI QE +K KI +D+S+I AEAIRR
Sbjct: 243 KVYAILTHGIFSGPAISRINSAAFEAVVVTNTIPQEDKMKHCSKIQVIDISMILAEAIRR 302
Query: 900 IH 905
H
Sbjct: 303 TH 304
>sp|P21108|PRPS3_HUMAN Ribose-phosphate pyrophosphokinase III (Phosphoribosyl
pyrophosphate synthetase III) (PRS-III) (Phosphoribosyl
pyrophosphate synthetase 1-like 1)
Length = 318
Score = 305 bits (782), Expect = 9e-83
Identities = 155/302 (51%), Positives = 221/302 (73%), Gaps = 2/302 (0%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGYID 185
NI++FSGSS+ L++KI +R+G++L + + KFSN ET V+I ESVRG+DV+I+QSG +
Sbjct: 3 NIKIFSGSSHQDLSQKIADRLGLELGKVVTKKFSNQETCVEIDESVRGEDVYIVQSGCGE 62
Query: 186 VNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGAN 365
+N+ LMELLIMINACK AS++R+TAV+P PY+RQ KKD +R PI+AKLVA++L IAGA+
Sbjct: 63 INDSLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRSPISAKLVANMLSIAGAD 122
Query: 366 HIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANMA 545
HIITMDLHASQIQGFF++PVDNL +E + WI++NI +W+ I S + A+RV ++A
Sbjct: 123 HIITMDLHASQIQGFFDIPVDNLYAEPTVLKWIRENIPEWKNCIIVSPDAGGAKRVTSIA 182
Query: 546 NTLKVRFGLIYVEKKEASEQ--IILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGAA 719
+ L V F LI+ E+K+A+E I+LVGDV R+A+++ D+ D C + + +L GA
Sbjct: 183 DQLNVDFALIHKERKKANEVDCIVLVGDVNDRVAILVDDMADTCVTICLAADKLLSAGAT 242
Query: 720 GVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAIRR 899
VY I THG+ S + ++ + +VVTNTI Q++ +K KI +D+S+I AEAIRR
Sbjct: 243 RVYAILTHGIFSGPAISRINTACFEAVVVTNTIPQDEKMKHCSKIRVIDISMILAEAIRR 302
Query: 900 IH 905
H
Sbjct: 303 TH 304
>sp|P38063|KPR4_YEAST Probable ribose-phosphate pyrophosphokinase 4 (Phosphoribosyl
pyrophosphate synthetase 4)
Length = 355
Score = 248 bits (633), Expect = 2e-65
Identities = 133/304 (43%), Positives = 214/304 (70%), Gaps = 4/304 (1%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGY-- 179
+I+L +G+S+ L E+I +++GI LS+ + ++SN ETSV I ES+R +DV+I+Q+G
Sbjct: 41 SIKLLAGNSHPDLAEQISKKLGIPLSKVGVYQYSNKETSVTIGESLRDEDVYIIQTGIGE 100
Query: 180 IDVNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAG 359
++N+ LMELLI+I+AC+ AS+ +IT V+P PY+RQ KKD +R PITAKLVA+LL AG
Sbjct: 101 QEINDFLMELLILIHACQIASARKITTVIPNFPYARQDKKDKSRAPITAKLVANLLQTAG 160
Query: 360 ANHIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVAN 539
A+H+ITMDLHASQIQGFF++PVDNL +E +++I+ + ++ + S + A+RVA
Sbjct: 161 ADHVITMDLHASQIQGFFHIPVDNLYAEPSVLNYIRARKTDFDNAILVSPDAGGAKRVAA 220
Query: 540 MANTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVG 713
+A+ L + F LI+ E+++A+E +++LVGDV ++ +++ D+ D C ++ + L E G
Sbjct: 221 LADKLDLNFALIHKERQKANEVSKMVLVGDVTNKSCLLVDDMADTCGTLVKACDTLMEHG 280
Query: 714 AAGVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAI 893
A V I THG+ S +++ +S ++++V TNT+ + + +D+I D+S FAEAI
Sbjct: 281 AKEVIAIVTHGIFSGSAREKLRNSRLSRIVCTNTVPVDLDLPIADQI---DISPTFAEAI 337
Query: 894 RRIH 905
RR+H
Sbjct: 338 RRLH 341
>sp|P38689|KPR3_YEAST Ribose-phosphate pyrophosphokinase 3 (Phosphoribosyl pyrophosphate
synthetase 3)
Length = 320
Score = 248 bits (632), Expect = 2e-65
Identities = 133/303 (43%), Positives = 206/303 (67%), Gaps = 3/303 (0%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFIL-QSGYI 182
+I+L + + L E + +R+G++L+ + L + E S I ESVR +D+FI+ Q G
Sbjct: 5 SIKLLAPDVHRGLAELVAKRLGLQLTSSKLKRDPTGEVSFSIGESVRDQDIFIITQIGSG 64
Query: 183 DVNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGA 362
VN+ ++ELLIMINA K AS+ RITA++P PY+RQ +KD +R PITAKL+AD+L AG
Sbjct: 65 VVNDRVLELLIMINASKTASARRITAIIPNFPYARQDRKDKSRAPITAKLMADMLTTAGC 124
Query: 363 NHIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANM 542
+H+ITMDLHASQIQGFF+VPVDNL +E + +IK+N++ + I I S + A+R A +
Sbjct: 125 DHVITMDLHASQIQGFFDVPVDNLYAEPSVVRYIKENVNYMDSI-IISPDAGGAKRAATL 183
Query: 543 ANTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGA 716
A+ L + F LI+ E+ A+E +++LVGDV +I +I+ D+ D C + + + L E A
Sbjct: 184 ADRLDLNFALIHKERARANEVSRMVLVGDVTDKICIIVDDMADTCGTLAKAAEILLENRA 243
Query: 717 AGVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAIR 896
V I THG+LS R ++ +++S + ++V TNT+ E+ +K+ K+A +D+S + AE+IR
Sbjct: 244 KSVIAIVTHGVLSGRAIENINNSKLDRVVCTNTVPFEEKIKKCPKLAVIDISSVLAESIR 303
Query: 897 RIH 905
R+H
Sbjct: 304 RLH 306
>sp|P38620|KPR2_YEAST Ribose-phosphate pyrophosphokinase 2 (Phosphoribosyl pyrophosphate
synthetase 2)
Length = 318
Score = 245 bits (625), Expect = 1e-64
Identities = 132/304 (43%), Positives = 209/304 (68%), Gaps = 4/304 (1%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFILQSGY-- 179
+I+L +G+S+ L E I +R+G+ LS+ + ++SN ETSV I ES+R +DV+I+Q+GY
Sbjct: 5 SIKLLAGNSHPGLAELISQRLGVPLSKVGVYQYSNKETSVTIGESIRDEDVYIIQTGYGE 64
Query: 180 IDVNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAG 359
++N+ LMELLI+I+ACK AS RITAV+P PY+RQ KKD +R PITAKL+A+LL AG
Sbjct: 65 HEINDFLMELLILIHACKTASVRRITAVIPNFPYARQDKKDKSRAPITAKLIANLLETAG 124
Query: 360 ANHIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVAN 539
+H+ITMDLHASQIQGFF++PVDNL E +++I+ + + + S + A+RVA+
Sbjct: 125 CDHVITMDLHASQIQGFFHIPVDNLYGEPSVLNYIRTK-TDFNNAILVSPDAGGAKRVAS 183
Query: 540 MANTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVG 713
+A+ L + F LI+ E+++A+E +++LVGDV + +++ D+ D C ++ + L + G
Sbjct: 184 LADKLDMNFALIHKERQKANEVSRMLLVGDVAGKSCLLIDDMADTCGTLVKACDTLMDHG 243
Query: 714 AAGVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAI 893
A V I THG+ S +++ +S ++++V TNT+ + + D++ D+S AEAI
Sbjct: 244 AKEVIAIVTHGIFSGSAREKLINSRLSRIVCTNTVPVDLDLDIVDQV---DISPTIAEAI 300
Query: 894 RRIH 905
RR+H
Sbjct: 301 RRLH 304
>sp|P46585|KPR1_CANAL Ribose-phosphate pyrophosphokinase 1 (Phosphoribosyl pyrophosphate
synthetase 1)
Length = 321
Score = 242 bits (617), Expect = 1e-63
Identities = 132/303 (43%), Positives = 199/303 (65%), Gaps = 3/303 (0%)
Frame = +3
Query: 6 NIRLFSGSSNILLTEKIGERIGIKLSEAILNKFSNNETSVQIKESVRGKDVFIL-QSGYI 182
+I+L + + L E + +R+G++L+ + L + S E I ESVR +D+FI+ Q G
Sbjct: 5 SIKLLASDVHRGLAELVSKRLGLRLTPSELKRESTGEVQFSIGESVRDEDIFIICQIGSG 64
Query: 183 DVNNHLMELLIMINACKNASSARITAVLPYMPYSRQSKKDNNRVPITAKLVADLLHIAGA 362
+VN+ + EL+IMINACK AS+ RIT +LP PY+RQ +KD +R PITAKL+AD+L AG
Sbjct: 65 EVNDRVFELMIMINACKTASARRITVILPNFPYARQDRKDKSRAPITAKLMADMLTTAGC 124
Query: 363 NHIITMDLHASQIQGFFNVPVDNLLSESCHISWIKKNISKWEEITIFSLNVTSAERVANM 542
+H+ITMDLHASQIQGFF+VPVDNL +E + +IK+ I + E I S + A+R A +
Sbjct: 125 DHVITMDLHASQIQGFFDVPVDNLYAEPSVVRYIKETID-YSEAIIISSDAGGAKRAAGL 183
Query: 543 ANTLKVRFGLIYVEKKEASE--QIILVGDVVSRIAVILLDIIDNCDLVISSVKRLKEVGA 716
A+ L + F LI+ E+ A+E +++LV DV +I VI+ D+ D C + + + L + A
Sbjct: 184 ADRLDLNFELIHKERARANEVSRMVLVVDVTDKICVIVDDMADTCGTLAKAAEVLLDNNA 243
Query: 717 AGVYVIATHGMLSERLMKEVDDSIITKLVVTNTICQEKYVKQSDKIACLDVSVIFAEAIR 896
V I THG+LS +K +++S + K+V TNT+ E +K K+ +D+S + AE+IR
Sbjct: 244 KDVIAIVTHGILSGNAIKNINNSKLKKVVCTNTVPFEDKLKLCLKLDTIDISAVIAESIR 303
Query: 897 RIH 905
R+H
Sbjct: 304 RLH 306
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,859,902
Number of Sequences: 369166
Number of extensions: 2064546
Number of successful extensions: 5673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5175
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5459
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9222552960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)