Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_J07
(525 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P26624|GST28_SCHJA Glutathione S-transferase 28 kDa (GST... 92 6e-19
sp|P09792|GST28_SCHMA Glutathione S-transferase 28 kDa (GST... 89 8e-18
sp|P46088|GST_OMMSL Glutathione S-transferase (GST class-si... 87 2e-17
sp|P30114|GST28_SCHHA Glutathione S-transferase 28 kDa (GST... 84 2e-16
sp|P30113|GST28_SCHBO Glutathione S-transferase 28 kDa (GST... 80 2e-15
sp|O73888|PTGD2_CHICK Glutathione-requiring prostaglandin D... 80 2e-15
sp|O18598|GST1_BLAGE Glutathione S-transferase (GST class-s... 80 4e-15
sp|P91253|GST7_CAEEL Probable glutathione S-transferase 7 (... 78 1e-14
sp|P46429|GST2_MANSE Glutathione S-transferase 2 (GST class... 76 6e-14
sp|P91254|GST8_CAEEL Probable glutathione S-transferase 8 (... 75 1e-13
>sp|P26624|GST28_SCHJA Glutathione S-transferase 28 kDa (GST 28) (SJ28 antigen) (GST
class-mu)
Length = 206
Score = 92.4 bits (228), Expect = 6e-19
Identities = 55/164 (33%), Positives = 93/164 (56%), Gaps = 9/164 (5%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEGKK-----LTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDV 167
PT P G+LP+V+ K+ +++S+AIAR IARK+ MG+ D EYY+IE+ IGQ+ DV
Sbjct: 41 PTIPGGRLPIVKITDKRGDVKTMSESLAIARFIARKHNMMGDTDDEYYIIEKMIGQVEDV 100
Query: 168 LEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GFFVGEKITLAELFFVV 341
+K P E+KE + E + L+++ +KES VG+K+TLA++ +
Sbjct: 101 ESEYHKTLIKPPEEKEKISKEILNGKVPILLQAICETLKESTGNLTVGDKVTLADVVLIA 160
Query: 342 LTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVT 467
D++ L K L +P++ + R+ +L + + ++ R T
Sbjct: 161 SIDHITDLDKEFLTGKYPEIHKHRKHLLATSPKLAKYLSERHAT 204
>sp|P09792|GST28_SCHMA Glutathione S-transferase 28 kDa (GST 28) (SM28 antigen)
(Protective 28 kDa antigen) (GST class-mu)
Length = 211
Score = 88.6 bits (218), Expect = 8e-18
Identities = 55/164 (33%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEG-----KKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDV 167
PT P G+LP V+ K + +S+AIAR +A+K+ MGE D+EYY +E+ IGQ DV
Sbjct: 46 PTIPGGRLPAVKVTDDHGHVKWMLESLAIARYMAKKHHMMGETDEEYYSVEKLIGQAEDV 105
Query: 168 LEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GFFVGEKITLAELFFVV 341
+K P+E+KE + E + L + +K S VG+K+TLA+L +
Sbjct: 106 EHEYHKTLMKPQEEKEKITKEILNGKVPVLLNMICESLKGSTGKLAVGDKVTLADLVLIA 165
Query: 342 LTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVT 467
+ D++ L K L +P++ + RE +L ++ + ++ RP T
Sbjct: 166 VIDHVTDLDKGFLTGKYPEIHKHRENLLASSPRLAKYLSNRPAT 209
>sp|P46088|GST_OMMSL Glutathione S-transferase (GST class-sigma)
Length = 203
Score = 87.4 bits (215), Expect = 2e-17
Identities = 56/160 (35%), Positives = 89/160 (55%), Gaps = 5/160 (3%)
Frame = +3
Query: 6 TTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLEGMYK 185
T + +PV++ +G K++QSM IAR +AR++G G+ E Y ++ + D+ + K
Sbjct: 45 TMYSNAMPVLDIDGTKMSQSMCIARHLAREFGLDGKTSLEKYRVDEITETLQDIFNDVVK 104
Query: 186 IYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES----GFFVGEKITLAELF-FVVLTD 350
I FAPE KE ++ + + R LEG + + GFFVG +TLA+L +V L
Sbjct: 105 IKFAPEAAKEAVQQNYEKSCKR-LAPFLEGLLVSNGGGDGFFVGNSMTLADLHCYVALEV 163
Query: 351 YLEKLPKLYDDFPKLKELRERVLKANTDVEDWVKTRPVTD 470
L+ P+L D PK+ LR+RV + + ++K RPV D
Sbjct: 164 PLKHTPELLKDCPKIVALRKRVAEC-PKIAAYLKKRPVRD 202
>sp|P30114|GST28_SCHHA Glutathione S-transferase 28 kDa (GST 28) (GST class-mu)
Length = 211
Score = 84.0 bits (206), Expect = 2e-16
Identities = 53/164 (32%), Positives = 90/164 (54%), Gaps = 9/164 (5%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEG-----KKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDV 167
PT P G+LP V+ K + +S+AIAR +A+K+ MGE D+EYY +E+ IGQ+ D+
Sbjct: 46 PTIPGGRLPAVKITDNHGHVKWMLESLAIARYMAKKHHMMGETDEEYYNVEKLIGQVEDL 105
Query: 168 LEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GFFVGEKITLAELFFVV 341
+K PEE+K+ + E + L + +K S VG+K+TLA+L +
Sbjct: 106 EHEYHKTLMKPEEEKQKITKEILNGKVPVLLDIICESLKASTGKLAVGDKVTLADLVLIA 165
Query: 342 LTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVT 467
+ D++ L K L +P++ + RE +L ++ + ++ R T
Sbjct: 166 VIDHVTDLDKEFLTGKYPEIHKHRENLLASSPRLAKYLSDRAAT 209
>sp|P30113|GST28_SCHBO Glutathione S-transferase 28 kDa (GST 28) (GST class-mu)
Length = 211
Score = 80.5 bits (197), Expect = 2e-15
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 9/164 (5%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEG-----KKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDV 167
PT P G+LP V+ K + +S+AIAR +A+K+ MG ++EYY +E+ IGQ D+
Sbjct: 46 PTIPGGRLPAVKITDNHGHVKWMVESLAIARYMAKKHHMMGGTEEEYYNVEKLIGQAEDL 105
Query: 168 LEGMYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKES--GFFVGEKITLAELFFVV 341
YK PEE+K+ + E + L + +K S VG+K+TLA+L +
Sbjct: 106 EHEYYKTLMKPEEEKQKIIKEILNGKVPVLLDIICESLKASTGKLAVGDKVTLADLVLIA 165
Query: 342 LTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVT 467
+ D++ L K L +P++ + RE +L ++ + ++ R T
Sbjct: 166 VIDHVTDLDKEFLTGKYPEIHKHRENLLASSPRLAKYLSDRAAT 209
>sp|O73888|PTGD2_CHICK Glutathione-requiring prostaglandin D synthase
(Glutathione-dependent PGD synthetase) (Prostaglandin-H2
D-isomerase) (Hematopoietic prostaglandin D synthase)
(H-PGDS)
Length = 199
Score = 80.5 bits (197), Expect = 2e-15
Identities = 51/160 (31%), Positives = 87/160 (54%), Gaps = 5/160 (3%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLEGMY 182
PT P GK+P++E +G + QS+AIAR +AR+ G G+ E L + + + D +
Sbjct: 44 PTIPFGKVPILEVDGVIIHQSLAIARYLARESGLAGQTPVEQALADAIVDTIDD-----F 98
Query: 183 KIYFAPEEKKEDLR----TEFVTTSGRDNLKSLEGFIKESGFFVGEKITLAELFF-VVLT 347
+ F EK +D++ + +T + LK L+ F+ + +FVG+ +T A+ ++ V T
Sbjct: 99 MMLFPWAEKNQDVKEKAFNDILTNKAPELLKDLDTFLGDKKWFVGKSVTWADFYWDVCST 158
Query: 348 DYLEKLPKLYDDFPKLKELRERVLKANTDVEDWVKTRPVT 467
L L D +P+L LR+RV +A + W++ RP T
Sbjct: 159 TLLSYKADLADKYPRLLALRDRV-EALPAIAAWIQKRPKT 197
>sp|O18598|GST1_BLAGE Glutathione S-transferase (GST class-sigma) (Major allergen Bla g
5)
Length = 204
Score = 79.7 bits (195), Expect = 4e-15
Identities = 53/166 (31%), Positives = 86/166 (51%), Gaps = 9/166 (5%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLEGMY 182
P+ P GK PV+E +GK+ QS+AI+R + +++G G+DD E I+ + + D +
Sbjct: 45 PSMPFGKTPVLEIDGKQTHQSVAISRYLGKQFGLSGKDDWENLEIDMIVDTISDFRAAIA 104
Query: 183 KIYFAPEE-----KKEDLRTEFVT--TSGRDNLKSLEGFIKESGFFVGEKITLAELFFVV 341
++ +E K + L+ E + T D + G G+ K+T A+ +FV
Sbjct: 105 NYHYDADENSKQKKWDPLKKETIPYYTKKFDEVVKANG-----GYLAAGKLTWADFYFVA 159
Query: 342 LTDYLEKLPK--LYDDFPKLKELRERVLKANTDVEDWVKTRPVTDM 473
+ DYL + K L + P LK LRE+VL ++ WV RP TD+
Sbjct: 160 ILDYLNHMAKEDLVANQPNLKALREKVLGLPA-IKAWVAKRPPTDL 204
>sp|P91253|GST7_CAEEL Probable glutathione S-transferase 7 (GST class-sigma)
Length = 206
Score = 77.8 bits (190), Expect = 1e-14
Identities = 55/163 (33%), Positives = 85/163 (52%), Gaps = 8/163 (4%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLEG-- 176
P+TP G+LP++E +GK L QS AIAR +AR++G G+ E + Q D L
Sbjct: 44 PSTPFGQLPLLEVDGKVLAQSHAIARYLARQFGINGKCAWEEAQVNSVADQFKDYLNEVR 103
Query: 177 ---MYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKE--SGFFVGEKITLAELFFVV 341
M K+ FA E + L + + + F+K SG+ VG+ +T +L
Sbjct: 104 PYFMVKMGFA-EGDLDALAKDVFLPGFKKHYGFFANFLKSAGSGYLVGDSLTFVDLLVAQ 162
Query: 342 LT-DYLEKLPKLYDDFPKLKELRERVLKANTDVEDWVKTRPVT 467
T D L L D+FP+ K +E+V +N +++ W++TRPVT
Sbjct: 163 HTADLLAANAALLDEFPQFKAHQEKV-HSNANIKKWLETRPVT 204
>sp|P46429|GST2_MANSE Glutathione S-transferase 2 (GST class-sigma)
Length = 203
Score = 75.9 bits (185), Expect = 6e-14
Identities = 48/165 (29%), Positives = 88/165 (53%), Gaps = 12/165 (7%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLEGMY 182
P TP G++PV+E +GKK QS+AI+R + RKYG G D +E + I++ + + D+
Sbjct: 43 PNTPFGQMPVLEIDGKKYAQSLAISRYLGRKYGLAGNDIEEDFEIDQIVDFVNDIRASAA 102
Query: 183 KIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGF---------IKESGFFVGEKITLAELFF 335
+ + + ++++ E +N+K+ F K +GF ++T A+ F
Sbjct: 103 SVEYEQDAANKEVKHE-------ENMKNKYPFQLNKLSEIITKNNGFLALGRLTWADFVF 155
Query: 336 VVLTDYLEK---LPKLYDDFPKLKELRERVLKANTDVEDWVKTRP 461
V + DYL+K +P L + +P K+ E VL +N ++ ++ + P
Sbjct: 156 VGMFDYLKKMLRMPDLEEQYPIFKKPIETVL-SNPKLKAYLDSAP 199
>sp|P91254|GST8_CAEEL Probable glutathione S-transferase 8 (GST class-sigma)
Length = 206
Score = 74.7 bits (182), Expect = 1e-13
Identities = 53/163 (32%), Positives = 85/163 (52%), Gaps = 8/163 (4%)
Frame = +3
Query: 3 PTTPTGKLPVVEYEGKKLTQSMAIARAIARKYGFMGEDDKEYYLIERAIGQMVDVLEG-- 176
PTTP G+LP++E +GK L QS +IAR +AR++G G+ E + Q D
Sbjct: 44 PTTPFGQLPLLEVDGKVLPQSHSIARFLARQFGINGKCAWEEAQVNSIADQFKDYRNEVR 103
Query: 177 ---MYKIYFAPEEKKEDLRTEFVTTSGRDNLKSLEGFIKE--SGFFVGEKITLAELFFVV 341
M K+ FA E + L + + + + F+K SG+ VG+ +T +L
Sbjct: 104 PYVMVKMGFA-EGDLDALSKDVFLPGFKKHYGFIYNFLKTAGSGYLVGDSLTFVDLLIAQ 162
Query: 342 LT-DYLEKLPKLYDDFPKLKELRERVLKANTDVEDWVKTRPVT 467
T D L P L ++FP+ K +E+V +N +++ W++TRP T
Sbjct: 163 HTADILSTDPALLEEFPQFKAHQEKV-HSNANIKKWLETRPET 204
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 61,708,678
Number of Sequences: 369166
Number of extensions: 1243501
Number of successful extensions: 4195
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4162
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3502236525
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)