Planarian EST Database


Dr_sW_020_I15

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_020_I15
         (684 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55277|VATL_HELVI  Vacuolar ATP synthase 16 kDa proteolip...   200   3e-51
sp|P63081|VATL_RAT  Vacuolar ATP synthase 16 kDa proteolipid...   199   6e-51
sp|P31403|VATL_MANSE  Vacuolar ATP synthase 16 kDa proteolip...   199   7e-51
sp|Q03105|VATL_TORMA  Vacuolar ATP synthase 16 kDa proteolip...   197   3e-50
sp|O16110|VATL_AEDAE  Vacuolar ATP synthase 16 kDa proteolip...   197   3e-50
sp|P23380|VATL_DROME  Vacuolar ATP synthase 16 kDa proteolip...   195   8e-50
sp|O18882|VATL_SHEEP  Vacuolar ATP synthase 16 kDa proteolip...   195   8e-50
sp|P23956|VATL_BOVIN  Vacuolar ATP synthase 16 kDa proteolip...   195   1e-49
sp|P27449|VATL_HUMAN  Vacuolar ATP synthase 16 kDa proteolip...   194   1e-49
sp|Q26250|VATL_NEPNO  Vacuolar ATP synthase 16 kDa proteolip...   192   5e-49
>sp|P55277|VATL_HELVI Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 156

 Score =  200 bits (508), Expect = 3e-51
 Identities = 110/151 (72%), Positives = 117/151 (77%), Gaps = 3/151 (1%)
 Frame = +2

Query: 53  PIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAGIIAI 232
           PIY PFFGVMG  SA++F ALGAAYGTAKSGTGIA+M+VMRPELIMKSIIPVVMAGIIAI
Sbjct: 5   PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 64

Query: 233 YGLVVAVLIAQQI---GTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQQ 403
           YGLVVAVLIA  +     NYT+ K   H                 IGIVGDAGVRGTAQQ
Sbjct: 65  YGLVVAVLIAGSLDAPSNNYTLYKGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 124

Query: 404 PRLFVGMILILIFAEVLGLYGLIVALILSTK 496
           PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 155
>sp|P63081|VATL_RAT Vacuolar ATP synthase 16 kDa proteolipid subunit
 sp|P63082|VATL_MOUSE Vacuolar ATP synthase 16 kDa proteolipid subunit (PL16)
          Length = 155

 Score =  199 bits (506), Expect = 6e-51
 Identities = 109/148 (73%), Positives = 117/148 (79%)
 Frame = +2

Query: 53  PIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAGIIAI 232
           P Y+ FFGVMG +SAMVF A+GAAYGTAKSGTGIA+M+VMRPELIMKSIIPVVMAGIIAI
Sbjct: 8   PEYSSFFGVMGASSAMVFSAMGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 67

Query: 233 YGLVVAVLIAQQIGTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQQPRL 412
           YGLVVAVLIA  +    T+ +S                    IGIVGDAGVRGTAQQPRL
Sbjct: 68  YGLVVAVLIANSLTDGITLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRL 127

Query: 413 FVGMILILIFAEVLGLYGLIVALILSTK 496
           FVGMILILIFAEVLGLYGLIVALILSTK
Sbjct: 128 FVGMILILIFAEVLGLYGLIVALILSTK 155
>sp|P31403|VATL_MANSE Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 156

 Score =  199 bits (505), Expect = 7e-51
 Identities = 109/151 (72%), Positives = 117/151 (77%), Gaps = 3/151 (1%)
 Frame = +2

Query: 53  PIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAGIIAI 232
           PIY PFFGVMG  SA++F ALGAAYGTAKSGTGIA+M+VMRPELIMKSIIPVVMAGIIAI
Sbjct: 5   PIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 64

Query: 233 YGLVVAVLIAQQI---GTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQQ 403
           YGLVVAVLIA  +     NYT+ +   H                 IGIVGDAGVRGTAQQ
Sbjct: 65  YGLVVAVLIAGSLDSPSNNYTLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRGTAQQ 124

Query: 404 PRLFVGMILILIFAEVLGLYGLIVALILSTK 496
           PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 155
>sp|Q03105|VATL_TORMA Vacuolar ATP synthase 16 kDa proteolipid subunit (15 kDa
           mediatophore protein)
          Length = 154

 Score =  197 bits (500), Expect = 3e-50
 Identities = 108/148 (72%), Positives = 118/148 (79%)
 Frame = +2

Query: 53  PIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAGIIAI 232
           P Y+ FFGV+G ++AMVF ALGAAYGTAKSGTGIA+M+VMRPELIMKSIIPVVMAGIIAI
Sbjct: 7   PEYSAFFGVIGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIAI 66

Query: 233 YGLVVAVLIAQQIGTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQQPRL 412
           YGLVVAVLIA  +  + ++ KS                    IGIVGDAGVRGTAQQPRL
Sbjct: 67  YGLVVAVLIANSLTEDISLFKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRL 126

Query: 413 FVGMILILIFAEVLGLYGLIVALILSTK 496
           FVGMILILIFAEVLGLYGLIVALILSTK
Sbjct: 127 FVGMILILIFAEVLGLYGLIVALILSTK 154
>sp|O16110|VATL_AEDAE Vacuolar ATP synthase 16 kDa proteolipid subunit (V-ATPase
           C-subunit)
          Length = 157

 Score =  197 bits (500), Expect = 3e-50
 Identities = 107/151 (70%), Positives = 118/151 (78%), Gaps = 2/151 (1%)
 Frame = +2

Query: 50  EPIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAGIIA 229
           +P+Y PFFGVMG  +A++F ALGAAYGTAKSGTGIA+M+VMRPELIMKSIIPVVMAGIIA
Sbjct: 7   KPVYGPFFGVMGAAAAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMAGIIA 66

Query: 230 IYGLVVAVLIAQQIG--TNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQQ 403
           IYGLVVAVLIA  +   T Y++ K   H                 IGIVGDAGVRGTAQQ
Sbjct: 67  IYGLVVAVLIAGSLDTPTKYSLYKGFIHLGAGLAVGISGLAAGFAIGIVGDAGVRGTAQQ 126

Query: 404 PRLFVGMILILIFAEVLGLYGLIVALILSTK 496
           PRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 127 PRLFVGMILILIFAEVLGLYGLIVAIYLYTK 157
>sp|P23380|VATL_DROME Vacuolar ATP synthase 16 kDa proteolipid subunit (Ductin) (VHA16K)
          Length = 159

 Score =  195 bits (496), Expect = 8e-50
 Identities = 107/155 (69%), Positives = 120/155 (77%), Gaps = 2/155 (1%)
 Frame = +2

Query: 38  MATTEPIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMA 217
           +++  PIY PFFGVMG  SA++F ALGAAYGTAKSGTGIA+M+VMRPELIMKSIIPVVMA
Sbjct: 5   VSSDNPIYGPFFGVMGAASAIIFSALGAAYGTAKSGTGIAAMSVMRPELIMKSIIPVVMA 64

Query: 218 GIIAIYGLVVAVLIAQQI--GTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRG 391
           GIIAIYGLVVAVLIA  +   + Y++ +   H                 IGIVGDAGVRG
Sbjct: 65  GIIAIYGLVVAVLIAGALEEPSKYSLYRGFIHLGAGLAVGFSGLAAGFAIGIVGDAGVRG 124

Query: 392 TAQQPRLFVGMILILIFAEVLGLYGLIVALILSTK 496
           TAQQPRLFVGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 125 TAQQPRLFVGMILILIFAEVLGLYGLIVAIYLYTK 159
>sp|O18882|VATL_SHEEP Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 155

 Score =  195 bits (496), Expect = 8e-50
 Identities = 107/152 (70%), Positives = 117/152 (76%)
 Frame = +2

Query: 41  ATTEPIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAG 220
           A + P Y  FF VMG ++AMVF ALGAAYGTAKSGTGIA+M+VMRPE+IMKSIIPVVMAG
Sbjct: 4   AKSGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAG 63

Query: 221 IIAIYGLVVAVLIAQQIGTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQ 400
           IIAIYGLVVAVLIA  +    ++ +S                    IGIVGDAGVRGTAQ
Sbjct: 64  IIAIYGLVVAVLIANSLNDGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQ 123

Query: 401 QPRLFVGMILILIFAEVLGLYGLIVALILSTK 496
           QPRLFVGMILILIFAEVLGLYGLIVALILSTK
Sbjct: 124 QPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>sp|P23956|VATL_BOVIN Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 155

 Score =  195 bits (495), Expect = 1e-49
 Identities = 107/152 (70%), Positives = 116/152 (76%)
 Frame = +2

Query: 41  ATTEPIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAG 220
           A   P Y  FF VMG ++AMVF ALGAAYGTAKSGTGIA+M+VMRPE+IMKSIIPVVMAG
Sbjct: 4   AKNGPEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEMIMKSIIPVVMAG 63

Query: 221 IIAIYGLVVAVLIAQQIGTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQ 400
           IIAIYGLVVAVLIA  +    ++ +S                    IGIVGDAGVRGTAQ
Sbjct: 64  IIAIYGLVVAVLIANSLNDGISLYRSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQ 123

Query: 401 QPRLFVGMILILIFAEVLGLYGLIVALILSTK 496
           QPRLFVGMILILIFAEVLGLYGLIVALILSTK
Sbjct: 124 QPRLFVGMILILIFAEVLGLYGLIVALILSTK 155
>sp|P27449|VATL_HUMAN Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 155

 Score =  194 bits (494), Expect = 1e-49
 Identities = 107/148 (72%), Positives = 115/148 (77%)
 Frame = +2

Query: 53  PIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAGIIAI 232
           P Y  FF VMG ++AMVF ALGAAYGTAKSGTGIA+M+VMRPE IMKSIIPVVMAGIIAI
Sbjct: 8   PEYASFFAVMGASAAMVFSALGAAYGTAKSGTGIAAMSVMRPEQIMKSIIPVVMAGIIAI 67

Query: 233 YGLVVAVLIAQQIGTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQQPRL 412
           YGLVVAVLIA  +  + ++ KS                    IGIVGDAGVRGTAQQPRL
Sbjct: 68  YGLVVAVLIANSLNDDISLYKSFLQLGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQPRL 127

Query: 413 FVGMILILIFAEVLGLYGLIVALILSTK 496
           FVGMILILIFAEVLGLYGLIVALILSTK
Sbjct: 128 FVGMILILIFAEVLGLYGLIVALILSTK 155
>sp|Q26250|VATL_NEPNO Vacuolar ATP synthase 16 kDa proteolipid subunit
          Length = 159

 Score =  192 bits (489), Expect = 5e-49
 Identities = 105/150 (70%), Positives = 116/150 (77%), Gaps = 2/150 (1%)
 Frame = +2

Query: 53  PIYTPFFGVMGVTSAMVFCALGAAYGTAKSGTGIASMAVMRPELIMKSIIPVVMAGIIAI 232
           P+Y+PFFGVMG  SAMVF ALGAAYGTAKSG GI++M+VMRPELIMK IIPVVMAGIIAI
Sbjct: 7   PMYSPFFGVMGAASAMVFSALGAAYGTAKSGVGISAMSVMRPELIMKCIIPVVMAGIIAI 66

Query: 233 YGLVVAVLIAQQI--GTNYTMEKSLRHXXXXXXXXXXXXXXXXXIGIVGDAGVRGTAQQP 406
           YGLVVAVLIA ++     YT+ +   H                 IGIVGDAGVRGTAQQP
Sbjct: 67  YGLVVAVLIAGKLDEAPTYTLYQGFVHMGAGLSVGLSGLAAGFAIGIVGDAGVRGTAQQP 126

Query: 407 RLFVGMILILIFAEVLGLYGLIVALILSTK 496
           RL+VGMILILIFAEVLGLYGLIVA+ L TK
Sbjct: 127 RLYVGMILILIFAEVLGLYGLIVAIFLYTK 156
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,303,212
Number of Sequences: 369166
Number of extensions: 1194532
Number of successful extensions: 3879
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3800
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5830600200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)