Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_I09
(889 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P48727|YMEX_CAEEL Putative serine/threonine protein phos... 550 e-156
sp|P36873|PP1G_HUMAN Serine/threonine protein phosphatase P... 547 e-155
sp|P63088|PP1G_RAT Serine/threonine protein phosphatase PP1... 547 e-155
sp|P62139|PP1A_RABIT Serine/threonine protein phosphatase P... 547 e-155
sp|P62137|PP1A_MOUSE Serine/threonine protein phosphatase P... 546 e-155
sp|Q8MJ46|PP1G_CANFA Serine/threonine protein phosphatase P... 543 e-154
sp|P36874|PP1G_XENLA Serine/threonine protein phosphatase P... 543 e-154
sp|Q8WMS6|PP1A_CANFA Serine/threonine protein phosphatase P... 540 e-153
sp|P48461|PP11_DROME Serine/threonine protein phosphatase a... 537 e-152
sp|P12982|PP12_DROME Serine/threonine protein phosphatase a... 534 e-151
>sp|P48727|YMEX_CAEEL Putative serine/threonine protein phosphatase F56C9.1 in chromosome
III
Length = 333
Score = 550 bits (1416), Expect = e-156
Identities = 256/266 (96%), Positives = 263/266 (98%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGD+HGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 40 KSREIFLSQPILLELEAPLKICGDVHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 99
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP
Sbjct: 100 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 159
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
+AAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ GWGEND
Sbjct: 160 VAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVTGWGEND 219
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFG EVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 220 RGVSFTFGPEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 279
Query: 723 AMMSVDETLMCSFQILKPADKKKFPY 800
+MM+VDETLMCSFQILKPADKKK+PY
Sbjct: 280 SMMTVDETLMCSFQILKPADKKKYPY 305
>sp|P36873|PP1G_HUMAN Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 547 bits (1410), Expect = e-155
Identities = 257/263 (97%), Positives = 262/263 (99%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 41 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 100
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP
Sbjct: 101 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 160
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
IAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ +GWGEND
Sbjct: 161 IAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGEND 220
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 280
Query: 723 AMMSVDETLMCSFQILKPADKKK 791
AMMSVDETLMCSFQILKPA+KKK
Sbjct: 281 AMMSVDETLMCSFQILKPAEKKK 303
>sp|P63088|PP1G_RAT Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
sp|P61287|PP1G_BOVIN Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
sp|P63087|PP1G_MOUSE Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 547 bits (1410), Expect = e-155
Identities = 257/263 (97%), Positives = 262/263 (99%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 41 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 100
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP
Sbjct: 101 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 160
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
IAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ +GWGEND
Sbjct: 161 IAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGEND 220
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 280
Query: 723 AMMSVDETLMCSFQILKPADKKK 791
AMMSVDETLMCSFQILKPA+KKK
Sbjct: 281 AMMSVDETLMCSFQILKPAEKKK 303
>sp|P62139|PP1A_RABIT Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
sp|P62136|PP1A_HUMAN Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
sp|P62138|PP1A_RAT Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 547 bits (1410), Expect = e-155
Identities = 258/266 (96%), Positives = 261/266 (98%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 41 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 100
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP
Sbjct: 101 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 160
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
IAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ GWGEND
Sbjct: 161 IAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGEND 220
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 280
Query: 723 AMMSVDETLMCSFQILKPADKKKFPY 800
AMMSVDETLMCSFQILKPADK K Y
Sbjct: 281 AMMSVDETLMCSFQILKPADKNKGKY 306
>sp|P62137|PP1A_MOUSE Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 546 bits (1407), Expect = e-155
Identities = 257/266 (96%), Positives = 261/266 (98%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 41 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 100
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKI+YPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP
Sbjct: 101 LETICLLLAYKIRYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 160
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
IAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ GWGEND
Sbjct: 161 IAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGEND 220
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 280
Query: 723 AMMSVDETLMCSFQILKPADKKKFPY 800
AMMSVDETLMCSFQILKPADK K Y
Sbjct: 281 AMMSVDETLMCSFQILKPADKNKGKY 306
>sp|Q8MJ46|PP1G_CANFA Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G) (Protein phosphatase 1C catalytic subunit)
Length = 323
Score = 543 bits (1400), Expect = e-154
Identities = 255/263 (96%), Positives = 260/263 (98%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 41 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 100
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKYPENFFLLRGNHEC SINRIYGFYDECKRRYNIKLWKTFTDCFNCLP
Sbjct: 101 LETICLLLAYKIKYPENFFLLRGNHECVSINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 160
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
IAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ +GWGE D
Sbjct: 161 IAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVLGWGETD 220
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 280
Query: 723 AMMSVDETLMCSFQILKPADKKK 791
AMMSVDETLMCSFQILKPA+KKK
Sbjct: 281 AMMSVDETLMCSFQILKPAEKKK 303
>sp|P36874|PP1G_XENLA Serine/threonine protein phosphatase PP1-gamma catalytic subunit
(PP-1G)
Length = 323
Score = 543 bits (1400), Expect = e-154
Identities = 256/263 (97%), Positives = 261/263 (99%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 41 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 100
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP
Sbjct: 101 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 160
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
IAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ +GWGEN
Sbjct: 161 IAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDILGWGENY 220
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 280
Query: 723 AMMSVDETLMCSFQILKPADKKK 791
AMMSVDETLMCSFQILKPA+KKK
Sbjct: 281 AMMSVDETLMCSFQILKPAEKKK 303
>sp|Q8WMS6|PP1A_CANFA Serine/threonine protein phosphatase PP1-alpha catalytic subunit
(PP-1A)
Length = 330
Score = 540 bits (1390), Expect = e-153
Identities = 256/266 (96%), Positives = 259/266 (97%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 41 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 100
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTD FN LP
Sbjct: 101 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDXFNXLP 160
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
IAAI+DEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+ GWGEND
Sbjct: 161 IAAIVDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDVQGWGEND 220
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 221 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 280
Query: 723 AMMSVDETLMCSFQILKPADKKKFPY 800
AMMSVDETLMCSFQILKPADK K Y
Sbjct: 281 AMMSVDETLMCSFQILKPADKNKGKY 306
>sp|P48461|PP11_DROME Serine/threonine protein phosphatase alpha-1 isoform
Length = 327
Score = 537 bits (1384), Expect = e-152
Identities = 251/266 (94%), Positives = 259/266 (97%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 39 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 98
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKY ENFFLLRGNHECASINRIYGFYDECKRRY IKLWKTFTDCFNCLP
Sbjct: 99 LETICLLLAYKIKYAENFFLLRGNHECASINRIYGFYDECKRRYTIKLWKTFTDCFNCLP 158
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
+AAI+DEKIFCCHGGLSPDL SMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+TMGWGEND
Sbjct: 159 VAAIVDEKIFCCHGGLSPDLSSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGEND 218
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVV KFL KH+ DLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG
Sbjct: 219 RGVSFTFGAEVVGKFLQKHEFDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 278
Query: 723 AMMSVDETLMCSFQILKPADKKKFPY 800
AMMSVD+TLMCSFQILKPADK++F Y
Sbjct: 279 AMMSVDDTLMCSFQILKPADKRRFVY 304
>sp|P12982|PP12_DROME Serine/threonine protein phosphatase alpha-2 isoform
Length = 302
Score = 534 bits (1375), Expect = e-151
Identities = 250/263 (95%), Positives = 258/263 (98%)
Frame = +3
Query: 3 ESREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 182
+SREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS
Sbjct: 39 KSREIFLSQPILLELEAPLKICGDIHGQYYDLLRLFEYGGFPPESNYLFLGDYVDRGKQS 98
Query: 183 LETICLLLAYKIKYPENFFLLRGNHECASINRIYGFYDECKRRYNIKLWKTFTDCFNCLP 362
LETICLLLAYKIKY ENFFLLRGNHECASINRIYGFYDECKRRY+IKLWKTFTDCFNCLP
Sbjct: 99 LETICLLLAYKIKYSENFFLLRGNHECASINRIYGFYDECKRRYSIKLWKTFTDCFNCLP 158
Query: 363 IAAIIDEKIFCCHGGLSPDLQSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKETMGWGEND 542
+AAI+DEKIFCCHGGLSPDL SMEQIRRIMRPTDVPDQGLLCDLLWSDPDK+TMGWGEND
Sbjct: 159 VAAIVDEKIFCCHGGLSPDLTSMEQIRRIMRPTDVPDQGLLCDLLWSDPDKDTMGWGEND 218
Query: 543 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 722
RGVSFTFGAEVVAKFL KH+ DLICRAHQVVEDGYEFFAKR LVTLFSAPNYCGEFDNAG
Sbjct: 219 RGVSFTFGAEVVAKFLQKHEFDLICRAHQVVEDGYEFFAKRMLVTLFSAPNYCGEFDNAG 278
Query: 723 AMMSVDETLMCSFQILKPADKKK 791
AMMSVD+TLMCSFQILKPADK+K
Sbjct: 279 AMMSVDDTLMCSFQILKPADKRK 301
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,783,596
Number of Sequences: 369166
Number of extensions: 2280186
Number of successful extensions: 5383
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5010
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5203
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)