Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_F17
(896 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q16555|DPYL2_HUMAN Dihydropyrimidinase-related protein 2... 148 2e-35
sp|Q14195|DPYL3_HUMAN Dihydropyrimidinase-related protein 3... 147 4e-35
sp|O02675|DPYL2_BOVIN Dihydropyrimidinase-related protein 2... 147 5e-35
sp|P47942|DPYL2_RAT Dihydropyrimidinase-related protein 2 (... 146 7e-35
sp|Q90635|DPYL2_CHICK Dihydropyrimidinase-related protein 2... 146 7e-35
sp|O08553|DPYL2_MOUSE Dihydropyrimidinase-related protein 2... 146 9e-35
sp|Q62952|DPYL3_RAT Dihydropyrimidinase-related protein 3 (... 143 6e-34
sp|Q62188|DPYL3_MOUSE Dihydropyrimidinase-related protein 3... 142 1e-33
sp|Q62951|DPYL4_RAT Dihydropyrimidinase-related protein 4 (... 141 2e-33
sp|O35098|DPYL4_MOUSE Dihydropyrimidinase-related protein 4... 140 5e-33
>sp|Q16555|DPYL2_HUMAN Dihydropyrimidinase-related protein 2 (DRP-2) (Collapsin response
mediator protein 2) (CRMP-2) (N2A3)
Length = 572
Score = 148 bits (374), Expect = 2e-35
Identities = 87/307 (28%), Positives = 156/307 (50%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNL---STSQRDILHNESMAA 176
++ +IKQIG+N++V +K I+ ++++IPGGID T F + + D + AA
Sbjct: 37 MEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT II G++++ + SK C+Y +V++ + + ME LV
Sbjct: 97 LAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDISEWHKGIQEEMEALV 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
++G+N F + + + + I V A + + ++ +++ G
Sbjct: 157 KDHGVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + SR E E E + R + + C L I +VM+ +SA++++Q +++G ++
Sbjct: 217 ITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYITKVMSKSSAEVIAQARKKGTVVYG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNE--QDGAIIRSIHCGDIDMLASQHTTI 875
E ITA+L Y S NW +AA+ +T PPL + + + CGD+ + S H T
Sbjct: 277 EPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTF 336
Query: 876 TAADRSI 896
A +++
Sbjct: 337 NTAQKAV 343
>sp|Q14195|DPYL3_HUMAN Dihydropyrimidinase-related protein 3 (DRP-3) (Unc-33-like
phosphoprotein) (ULIP protein) (Collapsin response
mediator protein 4) (CRMP-4)
Length = 570
Score = 147 bits (371), Expect = 4e-35
Identities = 86/307 (28%), Positives = 154/307 (50%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNL---STSQRDILHNESMAA 176
++ +IKQIG N++V +K I+ K++IPGGID T+F + + D + AA
Sbjct: 37 MEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT II S++ + + + K C+Y +V++ N+ + ++NL+
Sbjct: 97 LAGGTTMIIDHVVPEPESSLTEAYEKWREWADGKSCCDYALHVDITHWNDSVKQEVQNLI 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
+ G+N F + + + N + + A + + + ++ G
Sbjct: 157 KDKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQVHAENGDIIAQEQTRMLEMG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + SR E E E ++R + + C L + +VM+ ++A ++SQ +++G +F
Sbjct: 217 ITGPEGHVLSRPEELEAEAVFRAITIASQTNCPLYVTKVMSKSAADLISQARKKGNVVFG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNE--QDGAIIRSIHCGDIDMLASQHTTI 875
E ITA+L + Y S NW +AA+ +T PPL + I + GD+ + S H T
Sbjct: 277 EPITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTF 336
Query: 876 TAADRSI 896
+ A ++I
Sbjct: 337 STAQKAI 343
>sp|O02675|DPYL2_BOVIN Dihydropyrimidinase-related protein 2 (DRP-2) (Neural-specific
protein NSP60)
Length = 572
Score = 147 bits (370), Expect = 5e-35
Identities = 86/307 (28%), Positives = 157/307 (51%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNL---STSQRDILHNESMAA 176
++ +IKQIG+N++V +K I+ ++++IPGGID T F + + D + AA
Sbjct: 37 MEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT II G++++ + SK C+Y +V++ + + ME LV
Sbjct: 97 LAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDITEWHKGVQEEMEALV 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
++G+N F + + + ++ I V A + + ++ +++ G
Sbjct: 157 KDHGVNSFLVYMAFKDRFQLTDSQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + SR E E E + R + + C L I +VM+ ++A++++Q +++G ++
Sbjct: 217 ITGPEGHVLSRPEEVEAEAVNRSITIANQTNCPLYITKVMSKSAAEVIAQARKKGTVVYG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNE--QDGAIIRSIHCGDIDMLASQHTTI 875
E ITA+L Y S NW +AA+ +T PPL + + + CGD+ + S H T
Sbjct: 277 EPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTF 336
Query: 876 TAADRSI 896
A +++
Sbjct: 337 NTAQKAV 343
>sp|P47942|DPYL2_RAT Dihydropyrimidinase-related protein 2 (DRP-2) (Turned on after
division, 64 kDa protein) (TOAD-64) (Collapsin response
mediator protein 2) (CRMP-2)
Length = 572
Score = 146 bits (369), Expect = 7e-35
Identities = 85/307 (27%), Positives = 157/307 (51%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNL---STSQRDILHNESMAA 176
++ +IKQIG+N++V +K I+ ++++IPGGID T F + + D + AA
Sbjct: 37 MEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT II G++++ + SK C+Y +V++ + + ME LV
Sbjct: 97 LAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDITEWHKGIQEEMEALV 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
++G+N F + + + ++ I V A + + ++ +++ G
Sbjct: 157 KDHGVNSFLVYMAFKDRFQLTDSQIYEVLSVIRDIGAIAQVHAENGDIIAEEQQRILDLG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + SR E E E + R + + C L + +VM+ ++A++++Q +++G ++
Sbjct: 217 ITGPEGHVLSRPEEVEAEAVNRSITIANQTNCPLYVTKVMSKSAAEVIAQARKKGTVVYG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNE--QDGAIIRSIHCGDIDMLASQHTTI 875
E ITA+L Y S NW +AA+ +T PPL + + + CGD+ + S H T
Sbjct: 277 EPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTF 336
Query: 876 TAADRSI 896
A +++
Sbjct: 337 NTAQKAV 343
>sp|Q90635|DPYL2_CHICK Dihydropyrimidinase-related protein 2 (DRP-2) (Collapsin response
mediator protein CRMP-62)
Length = 572
Score = 146 bits (369), Expect = 7e-35
Identities = 86/307 (28%), Positives = 155/307 (50%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNL---STSQRDILHNESMAA 176
++ +IKQIG+N++V +K I+ +++IPGGID T F + + D + AA
Sbjct: 37 MEDGLIKQIGENLIVPGGVKTIEAHGRMVIPGGIDVHTRFQMPEQGMTSADDFFQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT II G++++ + SK C+Y +V++ + + ME LV
Sbjct: 97 LAGGTTMIIDHVVPEPGTSLLTAFDQWREWADSKSCCDYSLHVDITEWHKGVQEEMEALV 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
++G+N F + + + ++ I V A + + ++ ++ G
Sbjct: 157 KDHGVNSFLVYMAFKDRFQLSDSQIYEVLSVIRDIGATAQVHAENGDIIAEEQQRILELG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + SR E E E + R + + C L I +VM+ ++A++++Q +++G ++
Sbjct: 217 ITGPEGHVLSRPEEVEAEAVNRAITIANQTNCPLYITKVMSKSAAEVIAQARKKGTVVYG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNE--QDGAIIRSIHCGDIDMLASQHTTI 875
E ITA+L Y S NW +AA+ +T PPL + + + CGD+ + S H T
Sbjct: 277 EPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTF 336
Query: 876 TAADRSI 896
A +++
Sbjct: 337 NTAQKAV 343
>sp|O08553|DPYL2_MOUSE Dihydropyrimidinase-related protein 2 (DRP-2) (ULIP 2 protein)
Length = 572
Score = 146 bits (368), Expect = 9e-35
Identities = 85/307 (27%), Positives = 156/307 (50%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNL---STSQRDILHNESMAA 176
++ +IKQIG+N++V +K I+ ++++IPGGID T F + + D + AA
Sbjct: 37 MEDGLIKQIGENLIVPGGVKTIEAHSRMVIPGGIDVHTRFQMPDQGMTSADDFFQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT II G++++ + SK C+Y +V++ + + ME LV
Sbjct: 97 LAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSKSCCDYSLHVDITEWHKGIQEEMEALV 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
++G+N F + + + ++ I V A + + ++ +++ G
Sbjct: 157 KDHGVNSFLVYMAFKDRFQLTDSQIYEVLSVIRDIGAIAQVHAENGDIIAEAQQRILDLG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + SR E E E + R + + C L + +VM ++A++++Q +++G ++
Sbjct: 217 ITGPEGHVLSRPEEVEAEAVNRSITIANQTNCPLYVTKVMPKSAAEVIAQARKKGTVVYG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNE--QDGAIIRSIHCGDIDMLASQHTTI 875
E ITA+L Y S NW +AA+ +T PPL + + + CGD+ + S H T
Sbjct: 277 EPITASLGTDGSHYWSKNWAKAAAFVTSPPLSPDPTTPDFLNSLLSCGDLQVTGSAHCTF 336
Query: 876 TAADRSI 896
A +++
Sbjct: 337 NTAQKAV 343
>sp|Q62952|DPYL3_RAT Dihydropyrimidinase-related protein 3 (DRP-3) (Collapsin response
mediator protein 4) (CRMP-4)
Length = 358
Score = 143 bits (361), Expect = 6e-34
Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNL---STSQRDILHNESMAA 176
++ +IKQIG N++V +K I+ K+++PGGID T+F + + D + AA
Sbjct: 37 MEDGLIKQIGDNLIVPGGVKTIEANGKMVMPGGIDVHTHFQMPYKGMTTVDDFFQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT II S++ + + + K C+Y +V++ N+ + ++NL
Sbjct: 97 LAGGTTMIIDHVVPEPESSLTEAYEKWREWADGKSCCDYALHVDITHWNDSVKQEVQNLS 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
G+N F + + + N + + A + + + ++ G
Sbjct: 157 KEKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQVHAENGDIIAQEQARMLEMG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + SR E E E ++R + + C L + +VM+ ++A ++SQ +++G +F
Sbjct: 217 ITGPEGHVLSRPEELEAEAVFRAITVASQTNCPLYVTKVMSKSAADLISQARKKGNVVFG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNE--QDGAIIRSIHCGDIDMLASQHTTI 875
E ITA+L + Y S NW +AA+ +T PPL + I + GD+ + S H T
Sbjct: 277 EPITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTF 336
Query: 876 TAADRSI 896
+ A ++I
Sbjct: 337 STAQKAI 343
>sp|Q62188|DPYL3_MOUSE Dihydropyrimidinase-related protein 3 (DRP-3) (Unc-33-like
phosphoprotein) (ULIP protein)
Length = 570
Score = 142 bits (359), Expect = 1e-33
Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNL---STSQRDILHNESMAA 176
++ +IKQIG N++V +K I+ K++IPGGID T+F + + D + AA
Sbjct: 37 MEDGLIKQIGDNLIVPGGVKTIEANGKMVIPGGIDVHTHFQMPYKGMTTVDDFFQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT II S++ + + + K C+Y +V++ N+ + +++L
Sbjct: 97 LAGGTTMIIDHVVPEPESSLTEAYEKWREWADGKSCCDYALHVDITHWNDSVKQEVQSLS 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
G+N F + + + N + + A + + + ++ G
Sbjct: 157 KEKGVNSFMVYMAYKDLYQVSNTELYEIFTCLGELGAIAQVHAENGDIIAQEQARMLEMG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + SR E E E ++R + + C L + +VM+ ++A ++SQ +++G +F
Sbjct: 217 ITGPEGHVLSRPEELEAEAVFRAITVASQTNCPLYVTKVMSKSAADLISQARKKGNVVFG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNE--QDGAIIRSIHCGDIDMLASQHTTI 875
E ITA+L + Y S NW +AA+ +T PPL + I + GD+ + S H T
Sbjct: 277 EPITASLGIDGTHYWSKNWAKAAAFVTSPPLSPDPTTPDYINSLLASGDLQLSGSAHCTF 336
Query: 876 TAADRSI 896
+ A ++I
Sbjct: 337 STAQKAI 343
>sp|Q62951|DPYL4_RAT Dihydropyrimidinase-related protein 4 (DRP-4) (Collapsin response
mediator protein 3) (CRMP-3) (UNC33-like phosphoprotein
4) (ULIP4 protein)
Length = 564
Score = 141 bits (356), Expect = 2e-33
Identities = 85/307 (27%), Positives = 151/307 (49%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFN---LSTSQRDILHNESMAA 176
++ +IKQIG+N++V IK ID +++PGG+D T L + D + AA
Sbjct: 29 VEDGLIKQIGENLIVPGGIKTIDAHGLMVLPGGVDVHTRLQMPVLGMTPADDFCQGTKAA 88
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT I+ G +++ + + S C+Y +V++ + + + +E LV
Sbjct: 89 LAGGTTMILDHVFPDAGVSLLAAYEQWRERADSAACCDYSLHVDIPRWHESTKEELEALV 148
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
+ G+N F + + + + I + A + ++ ++ L+ +G
Sbjct: 149 RDKGVNSFLVFMAYKDRCQCTDGQIYEIFSLIRDLGAVAQVHAENGDIVEEEQKRLLEQG 208
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + S E E E +YR + + C L I +VM+ +A +++Q K+ G +F
Sbjct: 209 ITGPEGHVLSHPEEVEAEAVYRAVTIAKQANCPLYITKVMSKGAADMVAQAKRRGVVVFG 268
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNEQDGA--IIRSIHCGDIDMLASQHTTI 875
E ITA+L Y S NW +AA+ +T PP+ + A + + GD+ + S H T
Sbjct: 269 EPITASLGTDGSHYWSKNWAKAAAFVTSPPINPDPTTADHLTSLLSSGDLQVTGSAHCTF 328
Query: 876 TAADRSI 896
T A +++
Sbjct: 329 TTAQKAV 335
>sp|O35098|DPYL4_MOUSE Dihydropyrimidinase-related protein 4 (DRP-4) (Collapsin response
mediator protein 3) (CRMP-3) (UNC33-like phosphoprotein
4) (ULIP4 protein)
Length = 572
Score = 140 bits (353), Expect = 5e-33
Identities = 83/307 (27%), Positives = 151/307 (49%), Gaps = 10/307 (3%)
Frame = +3
Query: 6 IDKNIIKQIGQNIVVGNDIKVIDVTNKLIIPGGIDPSTNFNLST---SQRDILHNESMAA 176
++ +IKQIG+N++V IK ID +++PGG+D T + + D + AA
Sbjct: 37 VEDGLIKQIGENLIVPGGIKTIDAHGLMVLPGGVDVHTRLQMPVMGMTPADDFCQGTKAA 96
Query: 177 LAGGTTTIISCAKELNGSNIIDTLKTTQSEIKSKLFCNYGFYVEVDPDNNESVKSMENLV 356
LAGGTT I+ G +++ + + S C+Y +V++ + + + +E LV
Sbjct: 97 LAGGTTMILDHVFPDAGVSLLAAYEQWRERADSAACCDYSLHVDIPRWHESTKEELEALV 156
Query: 357 NNYGINCFQMTIGNE-----INANIISVXXXXXXXXXXXXXRANDNQFLKFVEEELINKG 521
+ G+N F + + + + I + A + ++ ++ L+ +G
Sbjct: 157 RDKGVNSFLVFMAYKDRCQCTDGQIYEIFSLIRDLGAVAQVHAENGDIVEEEQKRLLEQG 216
Query: 522 VTGPEGFLQSRCIENEIEQLYRILKLNYSFPCGLIIPQVMNGNSAKILSQMKQEGRPIFA 701
+TGPEG + S E E E +YR + + C L + +VM+ +A +++Q K+ G +F
Sbjct: 217 ITGPEGHVLSHPEEVEAEAVYRAVTIAKQANCPLYVTKVMSKGAADMVAQAKRRGVVVFG 276
Query: 702 ETITAALTLTNRKYLSDNWDEAASIITDPPLRNEQDGA--IIRSIHCGDIDMLASQHTTI 875
E ITA+L Y S NW +AA+ +T PP+ + A + + GD+ + S H T
Sbjct: 277 EPITASLGTDGSHYWSKNWAKAAAFVTSPPINPDPTTADHLTSLLSSGDLQVTGSAHCTF 336
Query: 876 TAADRSI 896
T A +++
Sbjct: 337 TTAQKAV 343
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,607,369
Number of Sequences: 369166
Number of extensions: 1907723
Number of successful extensions: 5277
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5197
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)