Planarian EST Database


Dr_sW_020_F15

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_020_F15
         (387 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P08108|HSP70_ONCMY  Heat shock cognate 70 kDa protein (HS...    86   2e-17
sp|Q90473|HSP7C_BRARE  Heat shock cognate 71 kDa protein (He...    84   1e-16
sp|P11142|HSP7C_HUMAN  Heat shock cognate 71 kDa protein (He...    82   4e-16
sp|P63017|HSP7C_MOUSE  Heat shock cognate 71 kDa protein (He...    82   4e-16
sp|P19378|HSP7C_CRIGR  Heat shock cognate 71 kDa protein (He...    82   4e-16
sp|P19120|HSP7C_BOVIN  Heat shock cognate 71 kDa protein (He...    82   4e-16
sp|P47773|HSP7C_ICTPU  Heat shock cognate 71 kDa protein           80   1e-15
sp|Q9W6Y1|HSP7C_ORYLA  Heat shock cognate 71 kDa protein (Hs...    79   3e-15
sp|P54652|HSP72_HUMAN  Heat shock-related 70 kDa protein 2 (...    76   3e-14
sp|P14659|HSP72_RAT  Heat shock-related 70 kDa protein 2 (He...    76   3e-14
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
          Length = 651

 Score = 86.3 bits (212), Expect = 2e-17
 Identities = 37/43 (86%), Positives = 41/43 (95%)
 Frame = +1

Query: 7   IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           I++KC+EVIGWLD NQTAEKEEYEHHQKELEKVCNPI+TK YQ
Sbjct: 570 ILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQ 612
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
          Length = 649

 Score = 83.6 bits (205), Expect = 1e-16
 Identities = 36/45 (80%), Positives = 41/45 (91%)
 Frame = +1

Query: 1   QAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           Q I+DKC+EVIGWLD NQTAE+EE+EH QKELEKVCNPI+TK YQ
Sbjct: 568 QKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQ 612
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
 sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
           (Intracellular vitamin D binding protein 1)
          Length = 646

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +1

Query: 1   QAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           Q I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 568 QKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
 sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
          Length = 646

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +1

Query: 1   QAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           Q I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 568 QKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
          Length = 646

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +1

Query: 1   QAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           Q I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 568 QKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
          Length = 650

 Score = 82.0 bits (201), Expect = 4e-16
 Identities = 35/45 (77%), Positives = 40/45 (88%)
 Frame = +1

Query: 1   QAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           Q I+DKC+E+I WLD NQTAEKEE+EH QKELEKVCNPI+TK YQ
Sbjct: 568 QKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQ 612
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
          Length = 649

 Score = 80.1 bits (196), Expect = 1e-15
 Identities = 34/43 (79%), Positives = 39/43 (90%)
 Frame = +1

Query: 7   IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           I+DKC+EVI WLD NQTAEK+EYEH QK+LEKVCNPI+TK YQ
Sbjct: 570 ILDKCNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQ 612
>sp|Q9W6Y1|HSP7C_ORYLA Heat shock cognate 71 kDa protein (Hsc70.1)
          Length = 686

 Score = 79.0 bits (193), Expect = 3e-15
 Identities = 34/45 (75%), Positives = 39/45 (86%)
 Frame = +1

Query: 1   QAIIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           Q I+DKC+EVI WLD NQTAE++EY H QKELEKVCNPI+TK YQ
Sbjct: 566 QKILDKCNEVISWLDKNQTAERDEYVHQQKELEKVCNPIITKLYQ 610
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
          Length = 639

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +1

Query: 7   IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           I+DKC EVI WLD NQ AEK+EYEH QKELE+VCNPI++K YQ
Sbjct: 573 ILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
           (Testis-specific heat shock protein-related) (HST)
          Length = 633

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 32/43 (74%), Positives = 37/43 (86%)
 Frame = +1

Query: 7   IIDKCSEVIGWLDHNQTAEKEEYEHHQKELEKVCNPIMTKFYQ 135
           I+DKC EVI WLD NQ AEK+EYEH QKELE+VCNPI++K YQ
Sbjct: 573 ILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ 615
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,932,985
Number of Sequences: 369166
Number of extensions: 635392
Number of successful extensions: 2000
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1981
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2000
length of database: 68,354,980
effective HSP length: 95
effective length of database: 50,805,155
effective search space used: 1676570115
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)