Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_D22
(876 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P20650|PP2CA_RAT Protein phosphatase 2C alpha isoform (P... 288 2e-77
sp|P35813|PP2CA_HUMAN Protein phosphatase 2C alpha isoform ... 287 3e-77
sp|P35814|PP2CA_RABIT Protein phosphatase 2C alpha isoform ... 286 5e-77
sp|O62829|PP2CA_BOVIN Protein phosphatase 2C alpha isoform ... 286 7e-77
sp|P49443|PP2CA_MOUSE Protein phosphatase 2C alpha isoform ... 283 3e-76
sp|P35815|PP2CB_RAT Protein phosphatase 2C beta isoform (PP... 273 4e-73
sp|O75688|PP2CB_HUMAN Protein phosphatase 2C beta isoform (... 272 1e-72
sp|P36993|PP2CB_MOUSE Protein phosphatase 2C beta isoform (... 272 1e-72
sp|O62830|PP2CB_BOVIN Protein phosphatase 2C beta isoform (... 271 1e-72
sp|P49596|PP2C2_CAEEL Probable protein phosphatase 2C T23F1... 135 1e-31
>sp|P20650|PP2CA_RAT Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 288 bits (736), Expect = 2e-77
Identities = 138/269 (51%), Positives = 193/269 (71%), Gaps = 2/269 (0%)
Frame = +2
Query: 71 LEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIR 250
+E VK GIR GFL++D+ + E ++G D+SGST + V I+P++ F NCGDSRG+L R
Sbjct: 94 VENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR 153
Query: 251 NNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQ 430
N VHFFT+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQ
Sbjct: 154 NRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQ 213
Query: 431 LVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVADLSKIAEEVID 610
LVSP+PE+ IE+ +DQ I+LACDG+WDVM N+EL +F+ R + DL K+ EV+D
Sbjct: 214 LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVD 273
Query: 611 NCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHEYVNTEGNEL-DINSL 787
CLYKGSRDNMS+++I NAP E ++ +L++ ++++V E + +G + D+ +
Sbjct: 274 TCLYKGSRDNMSVILICFPNAPKVSAEAVKKEAELDKYLENRVEEIIKKQGEGVPDLVHV 333
Query: 788 LMWLQSAELSDLPPGG-LTAKRFIIDPLF 871
+ L S + LPPGG L +KR +I+ ++
Sbjct: 334 MRTLASENIPSLPPGGELASKRNVIEAVY 362
>sp|P35813|PP2CA_HUMAN Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 287 bits (734), Expect = 3e-77
Identities = 138/269 (51%), Positives = 192/269 (71%), Gaps = 2/269 (0%)
Frame = +2
Query: 71 LEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIR 250
+E VK GIR GFL++D+ + E ++G D+SGST + V I+P++ F NCGDSRG+L R
Sbjct: 94 VENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR 153
Query: 251 NNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQ 430
N VHFFT+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQ
Sbjct: 154 NRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQ 213
Query: 431 LVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVADLSKIAEEVID 610
LVSP+PE+ IE+ +DQ I+LACDG+WDVM N+EL +F+ R + DL K+ EV+D
Sbjct: 214 LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVD 273
Query: 611 NCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHEYVNTEGNEL-DINSL 787
CLYKGSRDNMS+++I NAP E ++ +L++ ++ +V E + +G + D+ +
Sbjct: 274 TCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEIIKKQGEGVPDLVHV 333
Query: 788 LMWLQSAELSDLPPGG-LTAKRFIIDPLF 871
+ L S + LPPGG L +KR +I+ ++
Sbjct: 334 MRTLASENIPSLPPGGELASKRNVIEAVY 362
>sp|P35814|PP2CA_RABIT Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 286 bits (732), Expect = 5e-77
Identities = 138/269 (51%), Positives = 192/269 (71%), Gaps = 2/269 (0%)
Frame = +2
Query: 71 LEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIR 250
+E VK GIR GFL++D+ + E ++G D+SGST + V I+P++ F NCGDSRG+L R
Sbjct: 94 VENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR 153
Query: 251 NNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQ 430
N VHFFT+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQ
Sbjct: 154 NRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQ 213
Query: 431 LVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVADLSKIAEEVID 610
LVSP+PE+ IE+ +DQ I+LACDG+WDVM N+EL +F+ R + DL K+ EV+D
Sbjct: 214 LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVD 273
Query: 611 NCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHEYVNTEGNEL-DINSL 787
CLYKGSRDNMS+++I NAP E ++ +L++ ++ +V E + +G + D+ +
Sbjct: 274 TCLYKGSRDNMSVILICFPNAPKVSPEAVKKEAELDKYLECRVEEILKKQGEGVPDLVHV 333
Query: 788 LMWLQSAELSDLPPGG-LTAKRFIIDPLF 871
+ L S + LPPGG L +KR +I+ ++
Sbjct: 334 MRTLASENIPSLPPGGELASKRNVIEAVY 362
>sp|O62829|PP2CA_BOVIN Protein phosphatase 2C alpha isoform (PP2C-alpha)
Length = 382
Score = 286 bits (731), Expect = 7e-77
Identities = 138/269 (51%), Positives = 193/269 (71%), Gaps = 2/269 (0%)
Frame = +2
Query: 71 LEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIR 250
+E VK GIR GFL++D+ + E ++G D+SGST + V I+P++ F NCGDSRG+L R
Sbjct: 94 VENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR 153
Query: 251 NNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQ 430
N V+FFT+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQ
Sbjct: 154 NRKVYFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQ 213
Query: 431 LVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVADLSKIAEEVID 610
LVSP+PE+ IE+ +DQ I+LACDG+WDVM N+EL +F+ R + DL K+ EV+D
Sbjct: 214 LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVD 273
Query: 611 NCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHEYVNTEGNEL-DINSL 787
CLYKGSRDNMS+++I NAP E ++ +L++ ++S+V E + +G + D+ +
Sbjct: 274 TCLYKGSRDNMSVILICFPNAPKVSPEAVKKEEELDKYLESRVEEIIKKQGEGVPDLVHV 333
Query: 788 LMWLQSAELSDLPPGG-LTAKRFIIDPLF 871
+ L S + LPPGG L +KR +I+ ++
Sbjct: 334 MRTLASENIPSLPPGGELASKRNVIEAVY 362
>sp|P49443|PP2CA_MOUSE Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 283 bits (725), Expect = 3e-76
Identities = 137/269 (50%), Positives = 192/269 (71%), Gaps = 2/269 (0%)
Frame = +2
Query: 71 LEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIR 250
+E VK GIR GFL++D+ + E ++G D+SGST + V I+P++ F NCGDSRG+L R
Sbjct: 94 VENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCR 153
Query: 251 NNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQ 430
N VHFFT+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LGDFDYK V KGPTEQ
Sbjct: 154 NRKVHFFTQDHKPSNPLEKERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQ 213
Query: 431 LVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVADLSKIAEEVID 610
LVSP+PE+ IE+ +DQ I+LACDG+WDVM N+EL +F+ R + DL K+ EV+D
Sbjct: 214 LVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTDDLEKVCNEVVD 273
Query: 611 NCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHEYVNTEGNEL-DINSL 787
CLYKGSRDNMS+++I +AP E ++ +L++ ++S+V E + + + D+ +
Sbjct: 274 TCLYKGSRDNMSVILICFPSAPKVSAEAVKKEAELDKYLESRVEEIIKKQVEGVPDLVHV 333
Query: 788 LMWLQSAELSDLPPGG-LTAKRFIIDPLF 871
+ L S + LPPGG L +KR +I+ ++
Sbjct: 334 MRTLASENIPSLPPGGELASKRNVIEAVY 362
>sp|P35815|PP2CB_RAT Protein phosphatase 2C beta isoform (PP2C-beta) (IA) (Protein
phosphatase 1B)
Length = 390
Score = 273 bits (699), Expect = 4e-73
Identities = 137/285 (48%), Positives = 194/285 (68%), Gaps = 3/285 (1%)
Frame = +2
Query: 26 EFKKLELDEFGNPIDLEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKY 205
+F+ + F +E VK GIR GFL +D+ + ++ NG D+SGST + V I+P +
Sbjct: 84 DFRAADKSGFALEPSVENVKTGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPTH 143
Query: 206 VIFANCGDSRGVLIRNNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLG 385
+ F NCGDSR VL RN V F T+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LG
Sbjct: 144 IYFINCGDSRAVLCRNGQVCFSTQDHKPCNPMEKERIQNAGGSVMIQRVNGSLAVSRALG 203
Query: 386 DFDYKKVETKGPTEQLVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRC 565
D+DYK V+ KGPTEQLVSP+PE+ I + ED+ +VLACDG+WDVM+N+EL EF+ R
Sbjct: 204 DYDYKCVDGKGPTEQLVSPEPEVYEILRA-EEDEFVVLACDGIWDVMSNEELCEFVNSRL 262
Query: 566 QRVADLSKIAEEVIDNCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHE 745
+ DL + V+D CL+KGSRDNMS+V++ NAP +E RD++L++ ++S+V E
Sbjct: 263 EVSDDLENVCNWVVDTCLHKGSRDNMSIVLVCFANAPKVSDEAVKRDLELDKHLESRVEE 322
Query: 746 YVNTEGNE--LDINSLLMWLQSAELSDLPP-GGLTAKRFIIDPLF 871
+ G E D+ ++ L + + +LPP GGL KR +I+ ++
Sbjct: 323 IMQKSGEEGMPDLAHVMRILSAENIPNLPPGGGLAGKRNVIEAVY 367
>sp|O75688|PP2CB_HUMAN Protein phosphatase 2C beta isoform (PP2C-beta)
Length = 479
Score = 272 bits (695), Expect = 1e-72
Identities = 134/272 (49%), Positives = 190/272 (69%), Gaps = 3/272 (1%)
Frame = +2
Query: 65 IDLEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVL 244
+ +E VK GIR GFL +D+ + ++ NG D+SGST + V I+PK++ F NCGDSR VL
Sbjct: 97 LSVENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVL 156
Query: 245 IRNNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPT 424
RN V F T+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LGD+DYK V+ KGPT
Sbjct: 157 YRNGQVCFSTQDHKPCNpreKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPT 216
Query: 425 EQLVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVADLSKIAEEV 604
EQLVSP+PE+ I + ED+ I+LACDG+WDVM+N+EL E++ R + DL + V
Sbjct: 217 EQLVSPEPEVYEILRA-EEDEFIILACDGIWDVMSNEELCEYVKSRLEVSDDLENVCNWV 275
Query: 605 IDNCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHEYVNTEGNE--LDI 778
+D CL+KGSRDNMS+V++ NAP +E +D +L++ ++S+V E + G E D+
Sbjct: 276 VDTCLHKGSRDNMSIVLVCFSNAPKVSDEAVKKDSELDKHLESRVEEIMEKSGEEGMPDL 335
Query: 779 NSLLMWLQSAELSDLPP-GGLTAKRFIIDPLF 871
++ L + + +LPP GGL KR +I+ ++
Sbjct: 336 AHVMRILSAENIPNLPPGGGLAGKRNVIEAVY 367
>sp|P36993|PP2CB_MOUSE Protein phosphatase 2C beta isoform (PP2C-beta) (IA) (Protein
phosphatase 1B)
Length = 390
Score = 272 bits (695), Expect = 1e-72
Identities = 137/280 (48%), Positives = 194/280 (69%), Gaps = 5/280 (1%)
Frame = +2
Query: 47 DEFGNPID--LEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFAN 220
D+ G+ ++ +E VK GIR GFL +D+ + ++ NG D+SGST + V ++P ++ F N
Sbjct: 89 DKSGSALEPSVESVKTGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMVSPTHMYFIN 148
Query: 221 CGDSRGVLIRNNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYK 400
CGDSR VL RN V F T+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LGD+DYK
Sbjct: 149 CGDSRAVLCRNGQVCFSTQDHKPCNPVEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYK 208
Query: 401 KVETKGPTEQLVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVAD 580
V+ KGPTEQLVSP+PE+ I + ED+ +VLACDG+WDVM+N+EL EF+ R + D
Sbjct: 209 CVDGKGPTEQLVSPEPEVYEIVRA-EEDEFVVLACDGIWDVMSNEELCEFVKSRLEVSDD 267
Query: 581 LSKIAEEVIDNCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHEYVNTE 760
L + V+D CL+KGSRDNMS+V++ NAP EE RD +L++ ++S+V E +
Sbjct: 268 LENVCNWVVDTCLHKGSRDNMSVVLVCFSNAPKVSEEAVKRDSELDKHLESRVEEIMQKS 327
Query: 761 GNE--LDINSLLMWLQSAELSDLPP-GGLTAKRFIIDPLF 871
G E D+ ++ L + + +LPP GGL KR +I+ ++
Sbjct: 328 GEEGMPDLAHVMRILSAENIPNLPPGGGLAGKRHVIEAVY 367
>sp|O62830|PP2CB_BOVIN Protein phosphatase 2C beta isoform (PP2C-beta)
Length = 387
Score = 271 bits (694), Expect = 1e-72
Identities = 134/270 (49%), Positives = 189/270 (70%), Gaps = 3/270 (1%)
Frame = +2
Query: 71 LEQVKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIR 250
+E VK GIR GFL +D+ + ++ NG D+SGST + V I+PK++ F NCGDSR VL R
Sbjct: 99 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYR 158
Query: 251 NNAVHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQ 430
+ V F T+DHKP NP E++RI AGG+VMIQR+NGSLAVSR+LGD+DYK V+ KGPTEQ
Sbjct: 159 SGQVCFSTQDHKPCNpreKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQ 218
Query: 431 LVSPDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVADLSKIAEEVID 610
LVSP+PE+ I + ED+ I+LACDG+WDVM+N+EL EF+ R + DL + V+D
Sbjct: 219 LVSPEPEVYEILRA-EEDEFIILACDGIWDVMSNEELCEFVKSRLEVSDDLENVCNWVVD 277
Query: 611 NCLYKGSRDNMSLVIISTKNAPHFDEELANRDIKLNELIKSKVHEYVNTEGNE--LDINS 784
CL+KGSRDNMS+V++ NAP +E +D +L++ ++S+V E + G E D+
Sbjct: 278 TCLHKGSRDNMSIVLVCFSNAPKVSDEAMRKDSELDKYLESRVEEIMEKSGEEGMPDLAH 337
Query: 785 LLMWLQSAELSDLPP-GGLTAKRFIIDPLF 871
++ L + + +LPP GGL KR +I+ ++
Sbjct: 338 VMRILSAENIPNLPPGGGLAGKRHVIEAVY 367
>sp|P49596|PP2C2_CAEEL Probable protein phosphatase 2C T23F11.1 (PP2C)
Length = 356
Score = 135 bits (340), Expect = 1e-31
Identities = 76/199 (38%), Positives = 115/199 (57%), Gaps = 6/199 (3%)
Frame = +2
Query: 80 VKKGIRNGFLDLDKSIGQSHEVENGEDKSGSTVISVFITPKYVIFANCGDSRGVLIRNNA 259
+K+ I GFL+LD+ + E + +D SG+T + V I V N GDSR V
Sbjct: 89 MKEAIEKGFLELDQQMRVDEETK--DDVSGTTAVVVLIKEGDVYCGNAGDSRAVSSVVGE 146
Query: 260 VHFFTEDHKPMNPGERDRIMKAGGTVMIQRINGSLAVSRSLGDFDYKKVETKGPTEQLVS 439
+ DHKP + E RI+ AGG V R+NG+LA+SR+LGDF +K +TK EQ+V+
Sbjct: 147 ARPLSFDHKPSHETEARRIIAAGGWVEFNRVNGNLALSRALGDFAFKNCDTKPAEEQIVT 206
Query: 440 PDPEITVIEKVNNEDQLIVLACDGVWDVMTNDELGEFLIHRCQRVADLSKIAEEVIDNCL 619
P++ + +K+ + + IVLACDG+WDVMTN E+ +F+ + D I EE++ CL
Sbjct: 207 AFPDV-ITDKLTPDHEFIVLACDGIWDVMTNQEVVDFVREKLAEKRDPQSICEELLTRCL 265
Query: 620 YKGSR------DNMSLVII 658
+ DNM++V++
Sbjct: 266 APDCQMGGLGCDNMTVVLV 284
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,069,799
Number of Sequences: 369166
Number of extensions: 2073076
Number of successful extensions: 5718
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5665
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8694177530
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)