Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_B21
(871 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP... 411 e-114
sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP... 410 e-114
sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cy... 401 e-111
sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cy... 399 e-111
sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cy... 399 e-111
sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cy... 399 e-111
sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cyto... 398 e-111
sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cy... 397 e-110
sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mi... 395 e-110
sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mi... 390 e-108
>sp|P29190|PPCK_HAECO Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 619
Score = 411 bits (1057), Expect = e-114
Identities = 195/288 (67%), Positives = 224/288 (77%), Gaps = 1/288 (0%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
FV+C+HSVG PRP ++VINHWPCNPE+ LIAH P ER KK AL
Sbjct: 184 FVRCIHSVGLPRPVKQRVINHWPCNPERVLIAHRPAEREIWSFGSGYGGNSLLGKKMLAL 243
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
RIA IA DEGWMAEHMLIM VT P G+E FIAAAFPSACGKTN+AMLEP+LPGWKV+ V
Sbjct: 244 RIASNIAKDEGWMAEHMLIMGVTRPDGKEHFIAAAFPSACGKTNLAMLEPALPGWKVRCV 303
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWM+F E G L AINPE GFFGVAPGT+ KTNP A+ TFQKNSIFTNV ET++G Y
Sbjct: 304 GDDIAWMKFGEDGRLYAINPEYGFFGVAPGTSKKTNPMAVATFQKNSIFTNVGETANGEY 363
Query: 549 YWEGLEDEV-DKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKG 725
+WEGLEDE+ DKN+++ +WLG K ++GD GL AH NSRF PASQCPIIHP+WE PKG
Sbjct: 364 FWEGLEDEIKDKNVDMINWLGEKWRIGD--PGLCAHPNSRFAAPASQCPIIHPEWESPKG 421
Query: 726 VPISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
VPI AI+FGGRRP G+PL+ + +W HG+ GA LKSEATAAAE KGK
Sbjct: 422 VPIDAIIFGGRRPAGVPLVFETRSWLHGIFTGACLKSEATAAAEHKGK 469
>sp|Q05893|PPCK_ASCSU Phosphoenolpyruvate carboxykinase [GTP] (Phosphoenolpyruvate
carboxylase) (PEPCK)
Length = 643
Score = 410 bits (1054), Expect = e-114
Identities = 192/288 (66%), Positives = 228/288 (79%), Gaps = 1/288 (0%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
FV+CVHSVG P+P KVINHWPCNPEKT+IAH P ER KKCFAL
Sbjct: 207 FVRCVHSVGQPKPVATKVINHWPCNPEKTIIAHRPAEREIWSFGSGYGGNSLLGKKCFAL 266
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
RIA I YDEGWMAEHMLIM VT+PKGEE+F+AAAFPSACGKTN+AMLEP++PGWKV+V+
Sbjct: 267 RIAMNIGYDEGWMAEHMLIMGVTSPKGEERFVAAAFPSACGKTNLAMLEPTIPGWKVRVI 326
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWM+F G L AINPE GFFGVAPGT++KTNP AM +FQ+N+IFTNVAET+DG Y
Sbjct: 327 GDDIAWMKFGADGRLYAINPEYGFFGVAPGTSHKTNPMAMASFQENTIFTNVAETADGEY 386
Query: 549 YWEGLEDEV-DKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKG 725
+WEGLE EV + +++ +WLG +GD+SK AAH NSRF PA QCPIIHP WE P+G
Sbjct: 387 FWEGLEHEVKNPKVDMINWLGEPWHIGDESK--AAHPNSRFTAPAGQCPIIHPDWEKPEG 444
Query: 726 VPISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
VPI AI+FGGRRPEG+PL+ ++ +W HG+ +GA +KSEATAAAE GK
Sbjct: 445 VPIDAIIFGGRRPEGVPLVFESRSWVHGIFVGACVKSEATAAAEHTGK 492
>sp|Q9Z2V4|PPCKC_MOUSE Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 401 bits (1030), Expect = e-111
Identities = 182/287 (63%), Positives = 223/287 (77%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
F+KC+HSVGCP P + ++N+W CNPE TLIAHLPD R KKCFAL
Sbjct: 189 FIKCLHSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFAL 248
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
RIA R+A +EGW+AEHMLI+ +TNP+G++K++AAAFPSACGKTN+AM+ PSLPGWKV+ V
Sbjct: 249 RIASRLAKEEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPSLPGWKVECV 308
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWM+FD G LRAINPE GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG
Sbjct: 309 GDDIAWMKFDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGV 368
Query: 549 YWEGLEDEVDKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGV 728
YWEG+++ + + ITSW + + D AH NSRFC PASQCPII P WE P+GV
Sbjct: 369 YWEGIDEPLAPGVTITSWKNKEWRPQDAEP--CAHPNSRFCTPASQCPIIDPAWESPEGV 426
Query: 729 PISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
PI I+FGGRRPEG+PL+ +A +W+HGV +GA+++SEATAAAE KGK
Sbjct: 427 PIEGIIFGGRRPEGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
>sp|P05153|PPCKC_CHICK Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 399 bits (1025), Expect = e-111
Identities = 186/288 (64%), Positives = 221/288 (76%), Gaps = 1/288 (0%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
FVKC+HSVGCP P +IN+WPCNPE TLIAHLPD R KKCFAL
Sbjct: 189 FVKCLHSVGCPLPLKEPLINNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFAL 248
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
RIA RIA +EGW+AEHMLI+ +TNP+GE+K+ AAAFPSACGKTN+AM+ PS PGWK++ V
Sbjct: 249 RIASRIAKEEGWLAEHMLILGITNPEGEKKYFAAAFPSACGKTNLAMMNPSRPGWKIECV 308
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWM+FDE G LRAINPE GFFGVAPGT+ KTNPNA+KT KN+IFTNVAETSDG
Sbjct: 309 GDDIAWMKFDELGNLRAINPENGFFGVAPGTSIKTNPNAIKTIFKNTIFTNVAETSDGGV 368
Query: 549 YWEGLEDEVDKNLEITSWLGVKMKVGDKSKG-LAAHANSRFCCPASQCPIIHPKWEDPKG 725
YWEG+++ + + +TSW K K G AH NSRFC PASQCPI+ P WE P+G
Sbjct: 369 YWEGIDEPLPPGVTLTSW---KNKDWTPDNGEPCAHPNSRFCTPASQCPIMDPAWESPEG 425
Query: 726 VPISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
VPI I+FGGRRP G+PL+ +AFNW+HGV +GA+++SEATAAAE KGK
Sbjct: 426 VPIEGIIFGGRRPAGVPLVYEAFNWQHGVFIGAAMRSEATAAAEHKGK 473
>sp|P35558|PPCKC_HUMAN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 399 bits (1024), Expect = e-111
Identities = 182/287 (63%), Positives = 221/287 (77%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
FVKC+HSVGCP P + ++N+WPCNPE TLIAHLPD R KKCFAL
Sbjct: 189 FVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFAL 248
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
R+A R+A +EGW+AEHMLI+ +TNP+GE+K++AAAFPSACGKTN+AM+ PSLPGWKV+ V
Sbjct: 249 RMASRLAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECV 308
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWM+FD G LRAINPE GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG
Sbjct: 309 GDDIAWMKFDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGV 368
Query: 549 YWEGLEDEVDKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGV 728
YWEG+++ + + ITSW + D AH NSRFC PASQCPII WE P+GV
Sbjct: 369 YWEGIDEPLASGVTITSWKNKEWSSEDGEP--CAHPNSRFCTPASQCPIIDAAWESPEGV 426
Query: 729 PISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
PI I+FGGRRP G+PL+ +A +W+HGV +GA+++SEATAAAE KGK
Sbjct: 427 PIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
>sp|Q5R5J1|PPCKC_PONPY Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 399 bits (1024), Expect = e-111
Identities = 182/287 (63%), Positives = 221/287 (77%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
FVKC+HSVGCP P + ++N+WPCNPE TLIAHLPD R KKCFAL
Sbjct: 189 FVKCLHSVGCPLPLQKPLVNNWPCNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFAL 248
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
R+A R+A +EGW+AEHMLI+ +TNP+GE+K++AAAFPSACGKTN+AM+ PSLPGWKV+ V
Sbjct: 249 RMASRLAKEEGWLAEHMLILGITNPEGEKKYLAAAFPSACGKTNLAMMNPSLPGWKVECV 308
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWM+FD G LRAINPE GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG
Sbjct: 309 GDDIAWMKFDAQGHLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGV 368
Query: 549 YWEGLEDEVDKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGV 728
YWEG+++ + + ITSW + D AH NSRFC PASQCPII WE P+GV
Sbjct: 369 YWEGIDEPLASGVTITSWKNKEWSPEDGEP--CAHPNSRFCTPASQCPIIDAAWESPEGV 426
Query: 729 PISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
PI I+FGGRRP G+PL+ +A +W+HGV +GA+++SEATAAAE KGK
Sbjct: 427 PIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
>sp|P07379|PPCKC_RAT Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 398 bits (1023), Expect = e-111
Identities = 180/287 (62%), Positives = 223/287 (77%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
F+KC+HSVGCP P + ++N+W CNPE TLIAHLPD R KKCFAL
Sbjct: 189 FIKCLHSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFAL 248
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
RIA R+A +EGW+AEHMLI+ +TNP+G++K++AAAFPSACGKTN+AM+ P+LPGWKV+ V
Sbjct: 249 RIASRLAKEEGWLAEHMLILGITNPEGKKKYLAAAFPSACGKTNLAMMNPTLPGWKVECV 308
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWM+FD G LRAINPE GFFGVAPGT+ KTNPNA+KT QKN+IFTNVAETSDG
Sbjct: 309 GDDIAWMKFDAQGNLRAINPENGFFGVAPGTSVKTNPNAIKTIQKNTIFTNVAETSDGGV 368
Query: 549 YWEGLEDEVDKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGV 728
YWEG+++ + + ITSW + + D+ AH NSRFC PASQCPII P WE P+GV
Sbjct: 369 YWEGIDEPLAPGVTITSWKNKEWRPQDEEP--CAHPNSRFCTPASQCPIIDPAWESPEGV 426
Query: 729 PISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
PI I+FGGRRP G+PL+ +A +W+HGV +GA+++SEATAAAE KGK
Sbjct: 427 PIEGIIFGGRRPAGVPLVYEALSWQHGVFVGAAMRSEATAAAEHKGK 473
>sp|Q8HYZ4|PPCKC_BOVIN Phosphoenolpyruvate carboxykinase, cytosolic [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-C)
Length = 622
Score = 397 bits (1019), Expect = e-110
Identities = 179/287 (62%), Positives = 222/287 (77%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
FVKC+HSVGCP P + ++N+W CNPE TLIAHLPD R KKCFAL
Sbjct: 189 FVKCLHSVGCPLPLKKPLVNNWACNPELTLIAHLPDRREIISFGSGYGGNSLLGKKCFAL 248
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
R+A R+A +EGW+AEHMLI+ +TNPKG++K+ AAAFPSACGKTN+AM+ P+LPGWKV+ V
Sbjct: 249 RMASRLAKEEGWLAEHMLILGITNPKGQKKYFAAAFPSACGKTNLAMMNPTLPGWKVECV 308
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWM+FD+ G LRAINPE GFFGVAPGT+ +TNPNA+KT QKN+IFTNVAETSDG
Sbjct: 309 GDDIAWMKFDQQGNLRAINPENGFFGVAPGTSVRTNPNAIKTIQKNTIFTNVAETSDGGV 368
Query: 549 YWEGLEDEVDKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGV 728
YWEG++ + +++ SW G + D AH NSRFC PASQCPII P WE P+GV
Sbjct: 369 YWEGIDQPLAARVKLISWKGKEWDPKDGEP--CAHPNSRFCTPASQCPIIDPDWESPEGV 426
Query: 729 PISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
PI I+FGGRRP G+PL+ +A +W+HGV +GA+++SEATAAAE+KGK
Sbjct: 427 PIEGIIFGGRRPVGVPLVYEALSWQHGVFVGAAMRSEATAAAEYKGK 473
>sp|Q8BH04|PPCKM_MOUSE Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 395 bits (1015), Expect = e-110
Identities = 179/287 (62%), Positives = 219/287 (76%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
F+KC+HSVG P + WPCNPEKTLI H+PD+R KKCFAL
Sbjct: 207 FIKCLHSVGQPLTGHGDPVGQWPCNPEKTLIGHVPDQREIVSFGSGYGGNSLLGKKCFAL 266
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
RIA R+A DEGW+AEHMLI+ +TNP G+++++AAAFPSACGKTN+AM+ P+LPGWKV+ V
Sbjct: 267 RIASRLARDEGWLAEHMLILGITNPAGKKRYVAAAFPSACGKTNLAMMRPALPGWKVECV 326
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWMRFD G+LRAINPE GFFGVAPGT+ TNPNAM T Q N++FTNVAETSDG
Sbjct: 327 GDDIAWMRFDSEGQLRAINPENGFFGVAPGTSAATNPNAMATIQSNTLFTNVAETSDGGV 386
Query: 549 YWEGLEDEVDKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGV 728
YWEG++ + + ITSWLG K GDK AH NSRFC PA QCPI+ P WE P+GV
Sbjct: 387 YWEGIDQPLPPGVTITSWLGKPWKPGDKEP--CAHPNSRFCVPARQCPIMDPAWEAPEGV 444
Query: 729 PISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
PI AI+FGGRRP+G+PL+ +AFNW+HGV +G++++SE+TAAAE KGK
Sbjct: 445 PIDAIIFGGRRPKGVPLVYEAFNWRHGVFVGSAMRSESTAAAEHKGK 491
>sp|Q16822|PPCKM_HUMAN Phosphoenolpyruvate carboxykinase, mitochondrial precursor [GTP]
(Phosphoenolpyruvate carboxylase) (PEPCK-M)
Length = 640
Score = 390 bits (1003), Expect = e-108
Identities = 179/287 (62%), Positives = 216/287 (75%)
Frame = +3
Query: 9 FVKCVHSVGCPRPHPRKVINHWPCNPEKTLIAHLPDERXXXXXXXXXXXXXXXXKKCFAL 188
FVKC+HSVG P + ++ WPCNPEKTLI H+PD+R KKCFAL
Sbjct: 207 FVKCLHSVGQPLTGQGEPVSQWPCNPEKTLIGHVPDQREIISFGSGYGGNSLLGKKCFAL 266
Query: 189 RIAGRIAYDEGWMAEHMLIMSVTNPKGEEKFIAAAFPSACGKTNMAMLEPSLPGWKVQVV 368
RIA R+A DEGW+AEHMLI+ +T+P G++ AAAFPSACGKTN+AM+ P+LPGWKV+ V
Sbjct: 267 RIASRLARDEGWLAEHMLILGITSPAGKKALCAAAFPSACGKTNLAMMRPALPGWKVECV 326
Query: 369 GDDIAWMRFDEHGELRAINPEAGFFGVAPGTNYKTNPNAMKTFQKNSIFTNVAETSDGSY 548
GDDIAWMRFD G LRAINPE GFFGVAPGT+ TNPNAM T Q N+IFTNVAETSDG
Sbjct: 327 GDDIAWMRFDSEGRLRAINPENGFFGVAPGTSATTNPNAMATIQSNTIFTNVAETSDGGV 386
Query: 549 YWEGLEDEVDKNLEITSWLGVKMKVGDKSKGLAAHANSRFCCPASQCPIIHPKWEDPKGV 728
YWEG++ + + +TSWLG K GDK AH NSRFC PA QCPI+ P WE P+GV
Sbjct: 387 YWEGIDQPLPPGVTVTSWLGKPWKPGDKEP--CAHPNSRFCAPARQCPIMDPAWEAPEGV 444
Query: 729 PISAIVFGGRRPEGIPLIMQAFNWKHGVMLGASLKSEATAAAEFKGK 869
PI AI+FGGRRP+G+PL+ +AFNW+HGV +G +++SE+TAAAE KGK
Sbjct: 445 PIDAIIFGGRRPKGVPLVYEAFNWRHGVFVGRAMRSESTAAAEHKGK 491
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,547,899
Number of Sequences: 369166
Number of extensions: 2359884
Number of successful extensions: 6141
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5780
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5995
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8598109270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)