Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_B02
(281 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor 46 2e-05
sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (To... 42 3e-04
sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromo... 40 0.002
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 38 0.008
sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (... 35 0.054
sp|Q90495|ECAR_ECHCA Ecarin precursor 35 0.070
sp|P17511|MT1_CAEEL Metallothionein-I (MT-I) 34 0.12
sp|Q09244|YP95_CAEEL Hypothetical protein C28H8.5 precursor 34 0.12
sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion)... 33 0.16
sp|P41902|CRS5_YEAST Metallothionein-like protein CRS5 33 0.20
>sp|P30652|YOW6_CAEEL Hypothetical protein ZK643.6 precursor
Length = 180
Score = 46.2 bits (108), Expect = 2e-05
Identities = 27/75 (36%), Positives = 35/75 (46%), Gaps = 8/75 (10%)
Frame = +3
Query: 39 ECADTGDDCSSKTGEDCTNGE----VLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKMD 206
EC D +DCS C+ E + CPK+C+ C C D+ C RG C K D
Sbjct: 106 ECTDLANDCSYNQNR-CSVKEYSSLMHRLCPKTCNACNICEDANKMCPIWVPRGFCSKFD 164
Query: 207 -DRV---CRKTCGGC 239
D+V C K+C C
Sbjct: 165 HDKVQKSCAKSCNIC 179
Score = 32.0 bits (71), Expect = 0.45
Identities = 23/117 (19%), Positives = 41/117 (35%), Gaps = 42/117 (35%)
Frame = +3
Query: 18 VAAMCEDECADTGDDCSSKTGEDCTN--------------------GEVLEKCPKSCHLC 137
V C ++C T C+ K C++ ++ E+CP +C+ C
Sbjct: 26 VTQHCLEKCPATCGKCNRKNANLCSDKSKPDICVNLKTLCNSVEFYDKLSEQCPSTCNRC 85
Query: 138 -------------------GDCADSRPDCAFLKER---GDCDKMDDRVCRKTCGGCS 242
+C D DC++ + R + + R+C KTC C+
Sbjct: 86 PHNGTNPENKTGGNGGTGTQECTDLANDCSYNQNRCSVKEYSSLMHRLCPKTCNACN 142
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (Toxocara excretory-secretory
antigen 26) (TES-26)
Length = 262
Score = 42.4 bits (98), Expect = 3e-04
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 6/83 (7%)
Frame = +3
Query: 12 LIVAAMCEDECADTGDDCSSKTGEDCTN--GEVLE-KCPKSCHLCGDCADSRPDCAF--- 173
L V++ +C D+ DC++ G T +VL+ +C ++C+ C DC D +CA
Sbjct: 13 LFVSSGVAQQCMDSASDCAANAGSCFTRPVSQVLQNRCQRTCNTC-DCRDEANNCAASIN 71
Query: 174 LKERGDCDKMDDRVCRKTCGGCS 242
L + + + C+KTCG C+
Sbjct: 72 LCQNPTFEPLVRDRCQKTCGLCA 94
>sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromosome II precursor
Length = 154
Score = 40.0 bits (92), Expect = 0.002
Identities = 28/96 (29%), Positives = 40/96 (41%), Gaps = 18/96 (18%)
Frame = +3
Query: 9 GLIVAAMCEDECADTGDDCSSKTGEDCTNGE----VLEKCPKSCHLCG--------DCAD 152
G A+ C D D DC+ T C+N + + + CPK+C CG C D
Sbjct: 60 GATTASTCAD---DPNTDCTQYTSL-CSNAKYTPLLQQFCPKTCGFCGGGSTAAPVQCVD 115
Query: 153 SRPDCAFLKERGDCDKM------DDRVCRKTCGGCS 242
S +CA ++ G C + C KTC C+
Sbjct: 116 SSTNCANWEKNGFCSSTFYDCANKKQYCAKTCKLCT 151
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 37.7 bits (86), Expect = 0.008
Identities = 25/82 (30%), Positives = 37/82 (45%), Gaps = 12/82 (14%)
Frame = +3
Query: 30 CEDECADTGDDCS---SKTGEDCTN-GEVLEKCPKSCHLC------GDCADSRPDCAFLK 179
C+ D C ++ G+ +N G + +C SC +C G CAD DCA
Sbjct: 576 CDSPMCYNEDQCCPIWAQRGQCRSNPGYMTCQCKVSCGVCRPNYVYGPCADYHYDCAAWA 635
Query: 180 ERGDC--DKMDDRVCRKTCGGC 239
RG+C +K CR++C C
Sbjct: 636 RRGECLKNKWMPENCRRSCNTC 657
Score = 30.0 bits (66), Expect = 1.7
Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 10/52 (19%)
Frame = +3
Query: 114 CPKSCHLCG-------DCADSRPDCAFLKERGDCDKMD---DRVCRKTCGGC 239
C SC C +C+D +CA G+C+K CR +C C
Sbjct: 489 CKASCRQCTPNYNINEECSDRHTNCAMWSRSGECNKNPLWMSENCRSSCQKC 540
>sp|Q29116|TENA_PIG Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C) (P230)
Length = 1746
Score = 35.0 bits (79), Expect = 0.054
Identities = 16/44 (36%), Positives = 22/44 (50%)
Frame = +3
Query: 72 KTGEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKM 203
+TGEDC+ +CP CH G C R +C + DC +M
Sbjct: 429 RTGEDCSQ----LRCPNDCHGRGRCVQGRCECEHGFQGYDCSEM 468
Score = 34.7 bits (78), Expect = 0.070
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 78 GEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKMDDRVCRKTCGGCS 242
G DC+ +CP CH G C D R +C E DC ++ + GGCS
Sbjct: 369 GADCSE----RRCPSDCHNRGRCLDGRCECDDGFEGEDCGEL------RCPGGCS 413
Score = 32.0 bits (71), Expect = 0.45
Identities = 28/94 (29%), Positives = 29/94 (30%), Gaps = 32/94 (34%)
Frame = +3
Query: 9 GLIVAAMCEDECADTGDDCSSK-----------------------TGEDCTNGEVLEKCP 119
G V CE E G DCS TGEDC +CP
Sbjct: 447 GRCVQGRCECEHGFQGYDCSEMSCPHDCHQHGRCVNGMCVCDDGYTGEDCRE----LRCP 502
Query: 120 KSCHLCGDCADSR---------PDCAFLKERGDC 194
C G C D R PDCA L DC
Sbjct: 503 GDCSQRGRCVDGRCVCEHGFAGPDCADLACPSDC 536
Score = 30.0 bits (66), Expect = 1.7
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 9/49 (18%)
Frame = +3
Query: 78 GEDCTNGEVLEKCPKSCHLCGDCADSR---------PDCAFLKERGDCD 197
G +C+ E CP +CHL G C D + DC+ L DC+
Sbjct: 182 GPNCSEPE----CPSNCHLRGQCVDGQCVCNEGFTGEDCSQLACPSDCN 226
Score = 30.0 bits (66), Expect = 1.7
Identities = 20/54 (37%), Positives = 25/54 (46%)
Frame = +3
Query: 75 TGEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKMDDRVCRKTCGG 236
TGEDC GE++ CPK C G C + C E DC ++ C C G
Sbjct: 306 TGEDC--GELI--CPKDCFDRGRCINGTCYCDEGFEGEDCGRL---ACPHGCRG 352
>sp|Q90495|ECAR_ECHCA Ecarin precursor
Length = 616
Score = 34.7 bits (78), Expect = 0.070
Identities = 18/48 (37%), Positives = 23/48 (47%)
Frame = +3
Query: 24 AMCEDECADTGDDCSSKTGEDCTNGEVLEKCPKSCHLCGDCADSRPDC 167
A C + C D C K G +C NGE +KC K +C +R DC
Sbjct: 425 ADCRNPCCDAAT-CKLKPGAECGNGECCDKC-KIRKAGTECRPARDDC 470
>sp|P17511|MT1_CAEEL Metallothionein-I (MT-I)
Length = 75
Score = 33.9 bits (76), Expect = 0.12
Identities = 19/54 (35%), Positives = 24/54 (44%)
Frame = +3
Query: 30 CEDECADTGDDCSSKTGEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGD 191
C D+C +GD C K C + CP C GDC + CA K+ GD
Sbjct: 14 CGDKCECSGDKCCEK--YCCEEASEKKCCPAGCK--GDCKCANCHCAEQKQCGD 63
>sp|Q09244|YP95_CAEEL Hypothetical protein C28H8.5 precursor
Length = 302
Score = 33.9 bits (76), Expect = 0.12
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 4/56 (7%)
Frame = +3
Query: 21 AAMCEDECADTGDDCS---SKTGEDCTNGEVLEK-CPKSCHLCGDCADSRPDCAFL 176
+A +C DT +C+ + DC N E++ CP++C CG+ D + D L
Sbjct: 73 SAKIAPKCRDTDMNCAVWVATNTSDCENVELVNSHCPRTCQTCGEPIDPKYDVKLL 128
>sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C)
Length = 2201
Score = 33.5 bits (75), Expect = 0.16
Identities = 24/95 (25%), Positives = 33/95 (34%), Gaps = 19/95 (20%)
Frame = +3
Query: 9 GLIVAAMCEDECADTGDDCSSKTGED-------CTNGEVL------------EKCPKSCH 131
G + C E TG+DC T C G+ + ++CP CH
Sbjct: 323 GRCINGTCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGLDCSEKRCPADCH 382
Query: 132 LCGDCADSRPDCAFLKERGDCDKMDDRVCRKTCGG 236
G C D R +C DC ++ C C G
Sbjct: 383 NRGRCVDGRCECDDGFTGADCGELK---CPNGCSG 414
Score = 32.0 bits (71), Expect = 0.45
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 9/49 (18%)
Frame = +3
Query: 75 TGEDCTNGEVLEKCPKSCHLCGDCADSR---------PDCAFLKERGDC 194
TGEDC + +CP+ C G C D + PDCA L DC
Sbjct: 492 TGEDCRD----RQCPRDCSNRGLCVDGQCVCEDGFTGPDCAELSCPNDC 536
Score = 32.0 bits (71), Expect = 0.45
Identities = 20/72 (27%), Positives = 28/72 (38%), Gaps = 19/72 (26%)
Frame = +3
Query: 9 GLIVAAMCEDECADTGDDCSSKTGED-------CTNGEVL------------EKCPKSCH 131
GL V C E TG DC+ + + C NG+ + ++CP CH
Sbjct: 509 GLCVDGQCVCEDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSDCH 568
Query: 132 LCGDCADSRPDC 167
G C D + C
Sbjct: 569 GQGRCVDGQCIC 580
Score = 31.2 bits (69), Expect = 0.77
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +3
Query: 75 TGEDCTNGEVLEKCPKSCHLCGDCADSRPDCAFLKERGDCDKMDDRVCRKTC 230
TGEDC+ +CP CH G C + + C + DC M C C
Sbjct: 430 TGEDCSQ----LRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMS---CPNDC 474
Score = 28.9 bits (63), Expect = 3.8
Identities = 25/93 (26%), Positives = 32/93 (34%), Gaps = 19/93 (20%)
Frame = +3
Query: 9 GLIVAAMCEDECADTGDDCSS-KTGEDC-TNGEVLE-----------------KCPKSCH 131
G V C + TG+DCS + DC + G +E CP CH
Sbjct: 416 GRCVNGQCVCDEGYTGEDCSQLRCPNDCHSRGRCVEGKCVCEQGFKGYDCSDMSCPNDCH 475
Query: 132 LCGDCADSRPDCAFLKERGDCDKMDDRVCRKTC 230
G C + C DC DR C + C
Sbjct: 476 QHGRCVNGMCVCDDGYTGEDC---RDRQCPRDC 505
Score = 28.1 bits (61), Expect = 6.5
Identities = 16/49 (32%), Positives = 22/49 (44%), Gaps = 9/49 (18%)
Frame = +3
Query: 78 GEDCTNGEVLEKCPKSCHLCGDCADSR---------PDCAFLKERGDCD 197
G +C+ E CP +CHL G C D + DC+ L DC+
Sbjct: 182 GPNCSEPE----CPGNCHLRGRCIDGQCICDDGFTGEDCSQLACPSDCN 226
>sp|P41902|CRS5_YEAST Metallothionein-like protein CRS5
Length = 69
Score = 33.1 bits (74), Expect = 0.20
Identities = 19/62 (30%), Positives = 24/62 (38%), Gaps = 5/62 (8%)
Frame = +3
Query: 30 CEDECADTGDDCSSKTGEDCTNGEVLEKCPKS-----CHLCGDCADSRPDCAFLKERGDC 194
CE EC C S C+ GE KC S C CG+ C K + +C
Sbjct: 8 CEGECCKDSCHCGSTCLPSCSGGEKC-KCDHSTGSPQCKSCGEKCKCETTCTCEKSKCNC 66
Query: 195 DK 200
+K
Sbjct: 67 EK 68
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 31,823,534
Number of Sequences: 369166
Number of extensions: 592104
Number of successful extensions: 2346
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2117
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2329
length of database: 68,354,980
effective HSP length: 63
effective length of database: 56,716,675
effective search space used: 1701500250
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)