Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_A17
(880 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 538 e-152
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 538 e-152
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 537 e-152
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 537 e-152
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 537 e-152
sp|P92176|ACT2_LUMTE Actin-2 536 e-152
sp|P12716|ACTC_PISOC Actin, cytoplasmic 536 e-152
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 536 e-152
sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3) 536 e-152
sp|P30163|ACT2_ONCVO Actin-2 536 e-152
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 538 bits (1385), Expect = e-152
Identities = 262/277 (94%), Positives = 272/277 (98%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+R
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPE
Sbjct: 299 VLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 538 bits (1385), Expect = e-152
Identities = 262/277 (94%), Positives = 273/277 (98%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+R
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 239 KSYELPDGQVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPE
Sbjct: 299 VLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 537 bits (1383), Expect = e-152
Identities = 261/277 (94%), Positives = 272/277 (98%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+R
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPE
Sbjct: 299 VLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 537 bits (1383), Expect = e-152
Identities = 262/277 (94%), Positives = 271/277 (97%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+R
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPE
Sbjct: 299 VLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 537 bits (1383), Expect = e-152
Identities = 261/277 (94%), Positives = 272/277 (98%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+R
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPE
Sbjct: 299 VLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 536 bits (1382), Expect = e-152
Identities = 263/277 (94%), Positives = 272/277 (98%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN+PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR
Sbjct: 119 KMTQIMFETFNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 239 KSYELPDGQVITIGNERFRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGG+TM+PGIADRMQKEI+ALAPPTMKIKI+APPE
Sbjct: 299 VLSGGTTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 536 bits (1381), Expect = e-152
Identities = 261/277 (94%), Positives = 272/277 (98%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIYEGYALPHAILR
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 239 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGGSTM+PGIADRMQKE++ALAPPTMKIKI+APPE
Sbjct: 299 VLSGGSTMFPGIADRMQKEVTALAPPTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 536 bits (1380), Expect = e-152
Identities = 261/277 (94%), Positives = 271/277 (97%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+R
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEA FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 239 KSYELPDGQVITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANT 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGGSTM+PGIADRMQKEI+ALAPPTMKIKI+APPE
Sbjct: 299 VLSGGSTMFPGIADRMQKEITALAPPTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
>sp|P53486|ACT3_FUGRU Actin, cytoplasmic 3 (Beta-actin-3)
Length = 375
Score = 536 bits (1380), Expect = e-152
Identities = 263/277 (94%), Positives = 271/277 (97%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 58 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 117
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILR
Sbjct: 118 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILR 177
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TAS+SSSLE
Sbjct: 178 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATASSSSSLE 237
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN
Sbjct: 238 KSYELPDGQVITIGNERFRCPEALFQPSFLGMESSGIHETTYNSIMKCDVDIRKDLYANT 297
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGG+TMYPGIADRMQKEI+ALAP TMKIKI+APPE
Sbjct: 298 VLSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPE 334
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 335 RKYSVWIGGSILASLS 350
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 536 bits (1380), Expect = e-152
Identities = 262/277 (94%), Positives = 271/277 (97%)
Frame = +1
Query: 1 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 180
AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE
Sbjct: 59 AQSKRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANRE 118
Query: 181 KMTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 360
KMTQIMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR
Sbjct: 119 KMTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILR 178
Query: 361 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLE 540
LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SSSLE
Sbjct: 179 LDLAGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLE 238
Query: 541 KSYELPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANI 720
KSYELPDGQVIT+GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKDLYAN
Sbjct: 239 KSYELPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLYANN 298
Query: 721 VLSGGSTMYPGIADRMQKEISALAPPTMKIKIVAPPE 831
VLSGGSTMYPGIADRMQKEI+ALAP TMKIKI+APPE
Sbjct: 299 VLSGGSTMYPGIADRMQKEITALAPSTMKIKIIAPPE 335
Score = 35.4 bits (80), Expect = 0.21
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +3
Query: 831 RKYSVWIGGSILASLS 878
RKYSVWIGGSILASLS
Sbjct: 336 RKYSVWIGGSILASLS 351
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,421,679
Number of Sequences: 369166
Number of extensions: 2063847
Number of successful extensions: 7075
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6254
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6931
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8742211660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)