Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_P20
(257 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 50 2e-06
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 50 2e-06
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 50 2e-06
sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1) 46 2e-05
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 45 4e-05
sp|P34931|HS70L_HUMAN Heat shock 70 kDa protein 1L (Heat sh... 44 9e-05
sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70) 44 1e-04
sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein 44 1e-04
sp|P16627|HS70L_MOUSE Heat shock 70 kDa protein 1L (Heat sh... 44 1e-04
sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein 44 1e-04
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 49.7 bits (117), Expect = 2e-06
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 178
K+EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 589 KEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 49.7 bits (117), Expect = 2e-06
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 178
K+EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 589 KEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 49.7 bits (117), Expect = 2e-06
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 178
K+EF++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 589 KEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPSGGASSGPTIEEVD 646
>sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1)
Length = 639
Score = 46.2 bits (108), Expect = 2e-05
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 178
KDEF + KELEKVCNPI++K+YQ QGPT+EEVD
Sbjct: 591 KDEFQHKQKELEKVCNPIISKLYQ---------GGMPSGSCREQARADSQGPTIEEVD 639
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 45.4 bits (106), Expect = 4e-05
Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXXXXXXXXXXKQGPTVE 169
K+E+++H KELEKVCNPI+TK+YQ GPT+E
Sbjct: 589 KEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAGGAAPGGGGSSGPTIE 648
Query: 170 EVD 178
EVD
Sbjct: 649 EVD 651
>sp|P34931|HS70L_HUMAN Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa protein 1-Hom) (HSP70-Hom)
Length = 641
Score = 44.3 bits (103), Expect = 9e-05
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 178
KDEFD+ KELE++CNPI+TK+YQ GPT+EEVD
Sbjct: 591 KDEFDHKRKELEQMCNPIITKLYQ-------GGCTGPACGTGYVPGRPATGPTIEEVD 641
>sp|P02827|HSP70_XENLA Heat shock 70 kDa protein (HSP70)
Length = 647
Score = 43.9 bits (102), Expect = 1e-04
Identities = 21/58 (36%), Positives = 28/58 (48%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 178
K+E+ + K+LEKVC PI+TK+YQ GPT+EEVD
Sbjct: 590 KEEYAFQQKDLEKVCQPIITKLYQGGVPGGVPGGMPGSSCGAQARQGGNSGPTIEEVD 647
>sp|P27541|HSP70_BRUMA Heat shock 70 kDa protein
Length = 644
Score = 43.9 bits (102), Expect = 1e-04
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 178
KDEF++ KELE VCNPI+TK+YQ GPT+EEVD
Sbjct: 588 KDEFEHRQKELESVCNPIITKLYQSAGGMPGGMPGGMPGGAPGAGSTG-GGPTIEEVD 644
>sp|P16627|HS70L_MOUSE Heat shock 70 kDa protein 1L (Heat shock 70 kDa protein 1-like)
(Heat shock 70 kDa-like protein 1) (Spermatid-specific
heat shock protein 70)
Length = 641
Score = 43.9 bits (102), Expect = 1e-04
Identities = 24/58 (41%), Positives = 29/58 (50%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQGPTVEEVD 178
KDEFD+ KELE +CNPI+TK+YQ GPT+EEVD
Sbjct: 591 KDEFDHKRKELENMCNPIITKLYQ-------SGCTGPTCTPGYTPGRAATGPTIEEVD 641
>sp|Q05944|HSP70_HYDMA Heat shock 70 kDa protein
Length = 654
Score = 43.9 bits (102), Expect = 1e-04
Identities = 23/59 (38%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Frame = +2
Query: 5 KDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXXXXXKQ-GPTVEEVD 178
KD++++ KELEKVCNPI+TK+YQ GPT+EEVD
Sbjct: 596 KDQYEHKQKELEKVCNPIITKLYQAGGGMPGGMPGGMPGGMPGSGSKASSGGPTIEEVD 654
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,720,007
Number of Sequences: 369166
Number of extensions: 78092
Number of successful extensions: 372
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 303
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 318
length of database: 68,354,980
effective HSP length: 56
effective length of database: 58,009,820
effective search space used: 1682284780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)