Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_O09
(887 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P29844|HSP7C_DROME Heat shock 70 kDa protein cognate 3 p... 396 e-110
sp|Q24895|GRP78_ECHMU 78 kDa glucose-regulated protein prec... 390 e-108
sp|Q24798|GRP78_ECHGR 78 kDa glucose-regulated protein prec... 388 e-107
sp|Q16956|GRP78_APLCA 78 kDa glucose-regulated protein prec... 386 e-107
sp|Q91883|GRP78_XENLA 78 kDa glucose-regulated protein prec... 380 e-105
sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein prec... 380 e-105
sp|P11021|GRP78_HUMAN 78 kDa glucose-regulated protein prec... 380 e-105
sp|P19208|HSP7C_CAEBR Heat shock 70 kDa protein C precursor 379 e-105
sp|P20029|GRP78_MOUSE 78 kDa glucose-regulated protein prec... 379 e-105
sp|P07823|GRP78_MESAU 78 kDa glucose-regulated protein prec... 379 e-105
>sp|P29844|HSP7C_DROME Heat shock 70 kDa protein cognate 3 precursor (78 kDa glucose
regulated protein homolog) (GRP 78) (Heat shock protein
cognate 72)
Length = 656
Score = 396 bits (1018), Expect = e-110
Identities = 204/276 (73%), Positives = 228/276 (82%)
Frame = +3
Query: 60 ISVILLPFIVGLIYSNKETEEKPKDKILDYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQ 239
+ + +L +V + + E+K KDK L GTVIGIDLGTTYSCVG++K GRVEII NDQ
Sbjct: 1 MKLCILLAVVAFVGLSLGEEKKEKDKEL--GTVIGIDLGTTYSCVGVYKNGRVEIIANDQ 58
Query: 240 GNRITPSYIAFTQDGERLIGDSAKNQLTTNPVNTIFDVKRLIGREWTDSSVQKDITHYPF 419
GNRITPSY+AFT DGERLIGD+AKNQLTTNP NT+FD KRLIGREW+D++VQ DI +PF
Sbjct: 59 GNRITPSYVAFTADGERLIGDAAKNQLTTNPENTVFDAKRLIGREWSDTNVQHDIKFFPF 118
Query: 420 KVVNVDNKPHISVTVKGEEKSFQPEEISAMVLGKMKTIAEEYLGKKVTHAVVTVPAYFND 599
KVV ++KPHISV K F PEEISAMVLGKMK AE YLGKKVTHAVVTVPAYFND
Sbjct: 119 KVVEKNSKPHISVDTSQGAKVFAPEEISAMVLGKMKETAEAYLGKKVTHAVVTVPAYFND 178
Query: 600 AQRQATKNAGIIAGLTVLRIINEPTAAAIAYGLDKKAKSEPKEHQILVFDLGGGTFDVSL 779
AQRQATK+AG+IAGL V+RIINEPTAAAIAYGLDKK E +LVFDLGGGTFDVSL
Sbjct: 179 AQRQATKDAGVIAGLQVMRIINEPTAAAIAYGLDKK----EGEKNVLVFDLGGGTFDVSL 234
Query: 780 LMIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSKLY 887
L ID GVFEVVATNGDTHLGGEDFDQRV+D+F KLY
Sbjct: 235 LTIDNGVFEVVATNGDTHLGGEDFDQRVMDHFIKLY 270
>sp|Q24895|GRP78_ECHMU 78 kDa glucose-regulated protein precursor (GRP 78)
Length = 649
Score = 390 bits (1001), Expect = e-108
Identities = 196/248 (79%), Positives = 214/248 (86%)
Frame = +3
Query: 144 DYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGNRITPSYIAFTQDGERLIGDSAKNQLT 323
+YGTVIGIDLGTTYSCVG+FK GRVEII NDQGNRITPSY+AF+ DGERLIGD+AKNQLT
Sbjct: 26 EYGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDGERLIGDAAKNQLT 85
Query: 324 TNPVNTIFDVKRLIGREWTDSSVQKDITHYPFKVVNVDNKPHISVTVKGEEKSFQPEEIS 503
+NP NT+FD KRLIGR++ D VQ DI YPFKV+N +NKP++ V V EEK F PEE+S
Sbjct: 86 SNPKNTLFDAKRLIGRDYDDKDVQGDIKRYPFKVINKNNKPYMKVQVGSEEKGFAPEEVS 145
Query: 504 AMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDAQRQATKNAGIIAGLTVLRIINEPTAAA 683
AMVL KMK IAE YLG +VTHAVVTVPAYFNDAQRQATK+AG IAGLTVLRIINEPTAAA
Sbjct: 146 AMVLSKMKEIAEAYLGTEVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVLRIINEPTAAA 205
Query: 684 IAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRV 863
IAYGLDKK E ILVFDLGGGTFDVSLL ID GVFEVVAT+GDTHLGGEDFDQR+
Sbjct: 206 IAYGLDKK----DTEKNILVFDLGGGTFDVSLLTIDNGVFEVVATSGDTHLGGEDFDQRL 261
Query: 864 IDYFSKLY 887
IDYF KLY
Sbjct: 262 IDYFVKLY 269
>sp|Q24798|GRP78_ECHGR 78 kDa glucose-regulated protein precursor (GRP 78)
Length = 651
Score = 388 bits (996), Expect = e-107
Identities = 195/248 (78%), Positives = 214/248 (86%)
Frame = +3
Query: 144 DYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGNRITPSYIAFTQDGERLIGDSAKNQLT 323
+YGTVIGIDLGTTYSCVG+FK GRVEII NDQGNRITPSY+AF+ DGERLIGD+AKNQLT
Sbjct: 26 EYGTVIGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFSGDGERLIGDAAKNQLT 85
Query: 324 TNPVNTIFDVKRLIGREWTDSSVQKDITHYPFKVVNVDNKPHISVTVKGEEKSFQPEEIS 503
+NP NT+FD KRLIGR++ D VQ DI YPFKV+N +NKP++ V V EEK F PEE+S
Sbjct: 86 SNPKNTLFDAKRLIGRDYHDKDVQGDIKRYPFKVINKNNKPYMKVQVGSEEKGFAPEEVS 145
Query: 504 AMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDAQRQATKNAGIIAGLTVLRIINEPTAAA 683
AMVL KMK IAE YLG +VTHAVVTVPAYFNDAQRQATK+AG IAGLTVLRIINEPTAAA
Sbjct: 146 AMVLSKMKEIAEAYLGTEVTHAVVTVPAYFNDAQRQATKDAGAIAGLTVLRIINEPTAAA 205
Query: 684 IAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGEDFDQRV 863
IAYGL+KK E ILVFDLGGGTFDVSLL ID GVFEVVAT+GDTHLGGEDFDQR+
Sbjct: 206 IAYGLEKK----DTEKNILVFDLGGGTFDVSLLTIDNGVFEVVATSGDTHLGGEDFDQRL 261
Query: 864 IDYFSKLY 887
IDYF KLY
Sbjct: 262 IDYFVKLY 269
>sp|Q16956|GRP78_APLCA 78 kDa glucose-regulated protein precursor (GRP 78) (BiP) (Protein
1603)
Length = 667
Score = 386 bits (992), Expect = e-107
Identities = 196/265 (73%), Positives = 221/265 (83%)
Frame = +3
Query: 93 LIYSNKETEEKPKDKILDYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGNRITPSYIAF 272
L+ ++ + E++ K + GTVIGIDLGTTYSCVG+FK GRV+II NDQGNRITPSY+AF
Sbjct: 19 LVRADGDEEDEGDKKKSEVGTVIGIDLGTTYSCVGVFKNGRVDIIANDQGNRITPSYVAF 78
Query: 273 TQDGERLIGDSAKNQLTTNPVNTIFDVKRLIGREWTDSSVQKDITHYPFKVVNVDNKPHI 452
T DGERLIGD+AKNQLT+NP NTIFDVKRLIGR + D SVQ DI YPFKV N +NKPHI
Sbjct: 79 TADGERLIGDAAKNQLTSNPENTIFDVKRLIGRTFDDKSVQHDIKFYPFKVTNANNKPHI 138
Query: 453 SVTVKGEEKSFQPEEISAMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDAQRQATKNAGI 632
++SF PEEISAMVL KM+ IAEEYLGKK+T+AVVTVPAYFNDAQRQATK+AG
Sbjct: 139 QAATGEGDRSFAPEEISAMVLSKMRDIAEEYLGKKITNAVVTVPAYFNDAQRQATKDAGT 198
Query: 633 IAGLTVLRIINEPTAAAIAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLLMIDQGVFEVV 812
IAGL V+RIINEPTAAAIAYGLDKK E ILVFDLGGGTFDVSLL ID GVFEVV
Sbjct: 199 IAGLNVMRIINEPTAAAIAYGLDKK----EGEKNILVFDLGGGTFDVSLLTIDNGVFEVV 254
Query: 813 ATNGDTHLGGEDFDQRVIDYFSKLY 887
+TNGDTHLGGEDFDQRV+++F KLY
Sbjct: 255 STNGDTHLGGEDFDQRVMEHFIKLY 279
>sp|Q91883|GRP78_XENLA 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 658
Score = 380 bits (977), Expect = e-105
Identities = 195/269 (72%), Positives = 217/269 (80%)
Frame = +3
Query: 81 FIVGLIYSNKETEEKPKDKILDYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGNRITPS 260
F + L+ S DK D GTV+GIDLGTTYSCVG+FK GRVEII NDQGNRITPS
Sbjct: 7 FALVLLVSASVFASDDDDKKDDIGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPS 66
Query: 261 YIAFTQDGERLIGDSAKNQLTTNPVNTIFDVKRLIGREWTDSSVQKDITHYPFKVVNVDN 440
Y+AFT +GERLIGD+AKNQLT+NP NT+FD KRLIGR W D SVQ+DI + PFKV+
Sbjct: 67 YVAFTPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVIEKKT 126
Query: 441 KPHISVTVKGEEKSFQPEEISAMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDAQRQATK 620
KP+I V + + K+F PEEISAMVL KMK AE YLG+KVTHAVVTVPAYFNDAQRQATK
Sbjct: 127 KPYIEVDIGDQMKTFAPEEISAMVLVKMKETAEAYLGRKVTHAVVTVPAYFNDAQRQATK 186
Query: 621 NAGIIAGLTVLRIINEPTAAAIAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLLMIDQGV 800
+AG IAGL V+RIINEPTAAAIAYGLDKK E ILVFDLGGGTFDVSLL ID GV
Sbjct: 187 DAGTIAGLNVMRIINEPTAAAIAYGLDKK----EGEKNILVFDLGGGTFDVSLLTIDNGV 242
Query: 801 FEVVATNGDTHLGGEDFDQRVIDYFSKLY 887
FEVVATNGDTHLGGEDFDQRV+++F KLY
Sbjct: 243 FEVVATNGDTHLGGEDFDQRVMEHFIKLY 271
>sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 652
Score = 380 bits (976), Expect = e-105
Identities = 195/254 (76%), Positives = 214/254 (84%), Gaps = 1/254 (0%)
Frame = +3
Query: 129 KDKILDYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGNRITPSYIAFTQDGERLIGDSA 308
++K D GTV+GIDLGTTYSCVG+FK GRVEII NDQGNRITPSY+AFT +GERLIGD+A
Sbjct: 19 EEKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAA 78
Query: 309 KNQLTTNPVNTIFDVKRLIGREWTDSSVQKDITHYPFKVVNVDNKPHISVTV-KGEEKSF 485
KNQLT+NP NT+FD KRLIGR W D SVQ+DI + PFKVV KPHI V V G+ K+F
Sbjct: 79 KNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKYLPFKVVEKKAKPHIQVDVGGGQTKTF 138
Query: 486 QPEEISAMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDAQRQATKNAGIIAGLTVLRIIN 665
PEEISAMVL KMK AE YLGKKVTHAVVTVPAYFNDAQRQATK+AG IAGL V+RIIN
Sbjct: 139 APEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIIN 198
Query: 666 EPTAAAIAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGE 845
EPTAAAIAYGLDK+ E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGE
Sbjct: 199 EPTAAAIAYGLDKR----EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGE 254
Query: 846 DFDQRVIDYFSKLY 887
DFDQRV+++F KLY
Sbjct: 255 DFDQRVMEHFIKLY 268
>sp|P11021|GRP78_HUMAN 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP) (Endoplasmic
reticulum lumenal Ca(2+) binding protein grp78)
Length = 654
Score = 380 bits (975), Expect = e-105
Identities = 198/266 (74%), Positives = 218/266 (81%), Gaps = 1/266 (0%)
Frame = +3
Query: 93 LIYSNKETEEKPKDKILDYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGNRITPSYIAF 272
L+ S EE+ DK D GTV+GIDLGTTYSCVG+FK GRVEII NDQGNRITPSY+AF
Sbjct: 11 LLLSAARAEEE--DKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAF 68
Query: 273 TQDGERLIGDSAKNQLTTNPVNTIFDVKRLIGREWTDSSVQKDITHYPFKVVNVDNKPHI 452
T +GERLIGD+AKNQLT+NP NT+FD KRLIGR W D SVQ+DI PFKVV KP+I
Sbjct: 69 TPEGERLIGDAAKNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYI 128
Query: 453 SVTV-KGEEKSFQPEEISAMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDAQRQATKNAG 629
V + G+ K+F PEEISAMVL KMK AE YLGKKVTHAVVTVPAYFNDAQRQATK+AG
Sbjct: 129 QVDIGGGQTKTFAPEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAG 188
Query: 630 IIAGLTVLRIINEPTAAAIAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLLMIDQGVFEV 809
IAGL V+RIINEPTAAAIAYGLDK+ E ILVFDLGGGTFDVSLL ID GVFEV
Sbjct: 189 TIAGLNVMRIINEPTAAAIAYGLDKR----EGEKNILVFDLGGGTFDVSLLTIDNGVFEV 244
Query: 810 VATNGDTHLGGEDFDQRVIDYFSKLY 887
VATNGDTHLGGEDFDQRV+++F KLY
Sbjct: 245 VATNGDTHLGGEDFDQRVMEHFIKLY 270
>sp|P19208|HSP7C_CAEBR Heat shock 70 kDa protein C precursor
Length = 661
Score = 379 bits (973), Expect = e-105
Identities = 195/275 (70%), Positives = 222/275 (80%), Gaps = 6/275 (2%)
Frame = +3
Query: 81 FIVGLIYSNK-----ETEEKPKDKILDYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGN 245
F++GLI E EEK + K YGT+IGIDLGTTYSCVG++K GRVEII NDQGN
Sbjct: 5 FLLGLIALTAVSVYCEEEEKTEKKETKYGTIIGIDLGTTYSCVGVYKNGRVEIIANDQGN 64
Query: 246 RITPSYIAFT-QDGERLIGDSAKNQLTTNPVNTIFDVKRLIGREWTDSSVQKDITHYPFK 422
RITPSY+AF+ + G+RLIGD+AKNQLT NP NTIFD KRLIGR++ D +VQ DI H+PFK
Sbjct: 65 RITPSYVAFSGEQGDRLIGDAAKNQLTINPENTIFDAKRLIGRDYNDKTVQADIKHWPFK 124
Query: 423 VVNVDNKPHISVTVKGEEKSFQPEEISAMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDA 602
V++ NKP + V V + K F PEE+SAMVL KMK IAE YLGK+V HAVVTVPAYFNDA
Sbjct: 125 VLDKSNKPSVEVKVGADNKQFTPEEVSAMVLVKMKEIAESYLGKEVKHAVVTVPAYFNDA 184
Query: 603 QRQATKNAGIIAGLTVLRIINEPTAAAIAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLL 782
QRQATK+AG IAGL V+RIINEPTAAAIAYGLDKK E ILVFDLGGGTFDVS+L
Sbjct: 185 QRQATKDAGTIAGLNVVRIINEPTAAAIAYGLDKK----DGERNILVFDLGGGTFDVSML 240
Query: 783 MIDQGVFEVVATNGDTHLGGEDFDQRVIDYFSKLY 887
ID GVFEV+ATNGDTHLGGEDFDQRV++YF KLY
Sbjct: 241 TIDNGVFEVLATNGDTHLGGEDFDQRVMEYFIKLY 275
>sp|P20029|GRP78_MOUSE 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 655
Score = 379 bits (972), Expect = e-105
Identities = 194/254 (76%), Positives = 213/254 (83%), Gaps = 1/254 (0%)
Frame = +3
Query: 129 KDKILDYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGNRITPSYIAFTQDGERLIGDSA 308
+DK D GTV+GIDLGTTYSCVG+FK GRVEII NDQGNRITPSY+AFT +GERLIGD+A
Sbjct: 22 EDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAA 81
Query: 309 KNQLTTNPVNTIFDVKRLIGREWTDSSVQKDITHYPFKVVNVDNKPHISVTV-KGEEKSF 485
KNQLT+NP NT+FD KRLIGR W D SVQ+DI PFKVV KP+I V + G+ K+F
Sbjct: 82 KNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTF 141
Query: 486 QPEEISAMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDAQRQATKNAGIIAGLTVLRIIN 665
PEEISAMVL KMK AE YLGKKVTHAVVTVPAYFNDAQRQATK+AG IAGL V+RIIN
Sbjct: 142 APEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIIN 201
Query: 666 EPTAAAIAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGE 845
EPTAAAIAYGLDK+ E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGE
Sbjct: 202 EPTAAAIAYGLDKR----EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGE 257
Query: 846 DFDQRVIDYFSKLY 887
DFDQRV+++F KLY
Sbjct: 258 DFDQRVMEHFIKLY 271
>sp|P07823|GRP78_MESAU 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 654
Score = 379 bits (972), Expect = e-105
Identities = 194/254 (76%), Positives = 213/254 (83%), Gaps = 1/254 (0%)
Frame = +3
Query: 129 KDKILDYGTVIGIDLGTTYSCVGIFKEGRVEIIPNDQGNRITPSYIAFTQDGERLIGDSA 308
+DK D GTV+GIDLGTTYSCVG+FK GRVEII NDQGNRITPSY+AFT +GERLIGD+A
Sbjct: 21 EDKKEDVGTVVGIDLGTTYSCVGVFKNGRVEIIANDQGNRITPSYVAFTPEGERLIGDAA 80
Query: 309 KNQLTTNPVNTIFDVKRLIGREWTDSSVQKDITHYPFKVVNVDNKPHISVTV-KGEEKSF 485
KNQLT+NP NT+FD KRLIGR W D SVQ+DI PFKVV KP+I V + G+ K+F
Sbjct: 81 KNQLTSNPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTF 140
Query: 486 QPEEISAMVLGKMKTIAEEYLGKKVTHAVVTVPAYFNDAQRQATKNAGIIAGLTVLRIIN 665
PEEISAMVL KMK AE YLGKKVTHAVVTVPAYFNDAQRQATK+AG IAGL V+RIIN
Sbjct: 141 APEEISAMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVMRIIN 200
Query: 666 EPTAAAIAYGLDKKAKSEPKEHQILVFDLGGGTFDVSLLMIDQGVFEVVATNGDTHLGGE 845
EPTAAAIAYGLDK+ E ILVFDLGGGTFDVSLL ID GVFEVVATNGDTHLGGE
Sbjct: 201 EPTAAAIAYGLDKR----EGEKNILVFDLGGGTFDVSLLTIDNGVFEVVATNGDTHLGGE 256
Query: 846 DFDQRVIDYFSKLY 887
DFDQRV+++F KLY
Sbjct: 257 DFDQRVMEHFIKLY 270
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,801,651
Number of Sequences: 369166
Number of extensions: 1890518
Number of successful extensions: 6572
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5319
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5489
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8886314050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)