Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_N20
(841 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A 404 e-112
sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HS... 402 e-112
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 399 e-111
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 399 e-111
sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (... 398 e-111
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 398 e-110
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 398 e-110
sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70) 397 e-110
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 396 e-110
sp|P34930|HS70A_PIG Heat shock 70 kDa protein 1A (HSP70.1) 396 e-110
>sp|P09446|HSP7A_CAEEL Heat shock 70 kDa protein A
Length = 640
Score = 404 bits (1037), Expect = e-112
Identities = 206/280 (73%), Positives = 226/280 (80%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FRST++PVEK+LRDAK+DK+ +H+IVLVGGSTRIPK+QKLL DLF+GKELNKSINPDE
Sbjct: 311 FRSTMDPVEKSLRDAKMDKSQVHDIVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAV 370
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
ILSGDKSEAVQD GIETAGGVMTALIKRNTTIPTK Q F+
Sbjct: 371 AYGAAVQAAILSGDKSEAVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPTKTAQTFT 430
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQV+EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS
Sbjct: 431 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 490
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
AT+K TGK+NKITITNDKGRLSKDDIERMVN RIGAKN LESYA+ +
Sbjct: 491 ATDKSTGKQNKITITNDKGRLSKDDIERMVNEAEKYKADDEAQKDRIGAKNGLESYAFNL 550
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
K TIEDEKLKDKIS D+K+I D+C E + WL+ NQ A K
Sbjct: 551 KQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSNQTAEK 590
>sp|Q24789|HSP70_ECHGR Heat shock cognate 70 kDa protein (HSP70)
Length = 665
Score = 402 bits (1033), Expect = e-112
Identities = 202/280 (72%), Positives = 228/280 (81%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FRSTL+PVEKALRDAKLDK A+HEIVLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE
Sbjct: 312 FRSTLDPVEKALRDAKLDKGAVHEIVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAV 371
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
IL+GDKSEAVQD G+ETAGGVMTALIKRNTTIPTKQTQ F+
Sbjct: 372 AYGAAVQAAILTGDKSEAVQDLLLLDVAPLSLGLETAGGVMTALIKRNTTIPTKQTQTFT 431
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQV+EGERAM +DNNLLGKFELSGIPP PRGVPQIEVTFDIDANGILNVS
Sbjct: 432 TYSDNQPGVLIQVYEGERAMKRDNNLLGKFELSGIPPGPRGVPQIEVTFDIDANGILNVS 491
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
A +K TGK+NKITIT DKGRLSK++IERMVN R+ AKN LESYA+ M
Sbjct: 492 AVDKSTGKQNKITITRDKGRLSKEEIERMVNDAEKFKQEDEKQRDRVAAKNGLESYAFSM 551
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
KST+EDEK+K+KI ESDR++I+++C+E + WL+ NQQA K
Sbjct: 552 KSTVEDEKVKEKIGESDRRRIMEKCEETVKWLDGNQQAEK 591
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 399 bits (1025), Expect = e-111
Identities = 203/280 (72%), Positives = 226/280 (80%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FR TL+PVEKALRDAKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVS
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVS 489
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
A +K TGKENKITITNDKGRLSK+DIERMV ++ +KN LESYA+ M
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNM 549
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
K+T+EDEKL+ KI++ D+++I+D+C E ISWL+KNQ A K
Sbjct: 550 KATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEK 589
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 399 bits (1025), Expect = e-111
Identities = 203/280 (72%), Positives = 226/280 (80%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FR TL+PVEKALRDAKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVS
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVS 489
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
A +K TGKENKITITNDKGRLSK+DIERMV ++ +KN LESYA+ M
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNM 549
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
K+T+EDEKL+ KI++ D+++I+D+C E ISWL+KNQ A K
Sbjct: 550 KATVEDEKLQGKINDEDKQKILDKCNEIISWLDKNQTAEK 589
>sp|Q9U639|HSP7D_MANSE Heat shock 70 kDa protein cognate 4 (Hsc 70-4)
Length = 652
Score = 398 bits (1023), Expect = e-111
Identities = 204/280 (72%), Positives = 223/280 (79%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FRST+EPVEK+LRDAK+DK+ IH+IVLVGGSTRIPK+QKLLQD FNGKELNKSINPDE
Sbjct: 310 FRSTMEPVEKSLRDAKMDKSQIHDIVLVGGSTRIPKVQKLLQDFFNGKELNKSINPDEAV 369
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
IL GDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+
Sbjct: 370 AYGAAVQAAILHGDKSEEVQDLLLLDVTPLSLGIETAGGVMTTLIKRNTTIPTKQTQTFT 429
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQVFEGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVS
Sbjct: 430 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVS 489
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
A EK T KENKITITNDKGRLSK++IERMVN I AKN LESY + M
Sbjct: 490 AVEKSTNKENKITITNDKGRLSKEEIERMVNEAEKYRNEDEKQKETIQAKNALESYCFNM 549
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
KST+EDEKLKDKIS+SD++ I+D+C + I WL+ NQ A K
Sbjct: 550 KSTMEDEKLKDKISDSDKQTILDKCNDTIKWLDSNQLADK 589
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 398 bits (1022), Expect = e-110
Identities = 202/280 (72%), Positives = 226/280 (80%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FR TL+PVEKALRDAKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVS
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVS 489
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
A +K TGKENKITITNDKGRLSK+DIERMV ++ +KN LESYA+ M
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLESYAFNM 549
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
K+T+EDEKL+ KI++ D+++I+D+C E I+WL+KNQ A K
Sbjct: 550 KATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEK 589
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 398 bits (1022), Expect = e-110
Identities = 203/280 (72%), Positives = 224/280 (80%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FR TL+PVEKALRDAK+DK IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKMDKAQIHDIVLVGGSTRIPKIQKLLQDYFNGKELNKSINPDEAV 369
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGI+NVS
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGIMNVS 489
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
A +K TGKENKITITNDKGRLSK+DIERMV ++ AKN LESYA+ M
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDDVQRDKVSAKNGLESYAFNM 549
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
KST+EDEKLK KIS+ D+++I+D+C E I WL+KNQ A +
Sbjct: 550 KSTVEDEKLKGKISDEDKQKILDKCNEVIGWLDKNQTAER 589
>sp|Q91233|HSP70_ONCTS Heat shock 70 kDa protein (HSP70)
Length = 644
Score = 397 bits (1019), Expect = e-110
Identities = 201/280 (71%), Positives = 223/280 (79%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FR TLEPVEKALRDAK+DK IH++VLVGGSTRIPK+QKLLQD FNG+ELNKSINPDE
Sbjct: 312 FRGTLEPVEKALRDAKMDKAQIHDVVLVGGSTRIPKVQKLLQDFFNGRELNKSINPDEAV 371
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
ILSGDKSE VQD GIETAGGVMTALIKRNTTIP+KQTQ F+
Sbjct: 372 AYGAAIQAAILSGDKSENVQDLLLLDVAPLSLGIETAGGVMTALIKRNTTIPSKQTQTFT 431
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGV+IQV+EGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS
Sbjct: 432 TYSDNQPGVMIQVYEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 491
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
A +K TGKENKITITNDKGRLSK+DIERMV +I AKN LESYA+ M
Sbjct: 492 AVDKSTGKENKITITNDKGRLSKEDIERMVQDADKYKAEDDAQREKIAAKNSLESYAFNM 551
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
KS++ED+ +K KIS+ D+K++VDRC + ISWLE NQ K
Sbjct: 552 KSSVEDDNMKGKISQEDKKKVVDRCDQTISWLENNQLGDK 591
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 396 bits (1018), Expect = e-110
Identities = 201/280 (71%), Positives = 226/280 (80%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FR TL+PVEKALRDAKLDK+ IH+IVLVGGSTRIPKIQKLLQD FNGKELNKSINPDE
Sbjct: 310 FRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAV 369
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
ILSGDKSE VQD GIETAGGVMT LIKRNTTIPTKQTQ F+
Sbjct: 370 AYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGIETAGGVMTVLIKRNTTIPTKQTQTFT 429
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQV+EGERAMTKDNNLLGKFEL+GIPPAPRGVPQIEVTFDIDANGILNVS
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPRGVPQIEVTFDIDANGILNVS 489
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
A +K TGKENKITITNDKGRLSK+DIERMV ++ +KN L+SYA+ M
Sbjct: 490 AVDKSTGKENKITITNDKGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKNSLKSYAFNM 549
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
K+T+EDEKL+ KI++ D+++I+D+C E I+WL+KNQ A K
Sbjct: 550 KATVEDEKLQGKINDEDKQKILDKCNEIINWLDKNQTAEK 589
>sp|P34930|HS70A_PIG Heat shock 70 kDa protein 1A (HSP70.1)
Length = 641
Score = 396 bits (1018), Expect = e-110
Identities = 201/280 (71%), Positives = 226/280 (80%)
Frame = +2
Query: 2 FRSTLEPVEKALRDAKLDKNAIHEIVLVGGSTRIPKIQKLLQDLFNGKELNKSINPDEXX 181
FRSTLEPVEKALRDAKLDK IH++VLVGGSTRIPK+QKLLQD FNG++LNKSINPDE
Sbjct: 310 FRSTLEPVEKALRDAKLDKAQIHDLVLVGGSTRIPKVQKLLQDFFNGRDLNKSINPDEAV 369
Query: 182 XXXXXXXXXILSGDKSEAVQDXXXXXXXXXXXGIETAGGVMTALIKRNTTIPTKQTQIFS 361
IL GDKSE VQD G+ETAGGVMTALIKRN+TIPTKQTQIF+
Sbjct: 370 AYGAAVQAAILMGDKSENVQDLLLLDVAPLSLGLETAGGVMTALIKRNSTIPTKQTQIFT 429
Query: 362 TYSDNQPGVLIQVFEGERAMTKDNNLLGKFELSGIPPAPRGVPQIEVTFDIDANGILNVS 541
TYSDNQPGVLIQV+EGERAMT+DNNLLG+FELSGIPPAPRGVPQIEVTFDIDANGILNV+
Sbjct: 430 TYSDNQPGVLIQVYEGERAMTRDNNLLGRFELSGIPPAPRGVPQIEVTFDIDANGILNVT 489
Query: 542 ATEKGTGKENKITITNDKGRLSKDDIERMVNXXXXXXXXXXXXXXRIGAKNLLESYAYQM 721
AT+K TGK NKITITNDKGRLSK++IERMV R+GAKN LESYA+ M
Sbjct: 490 ATDKSTGKANKITITNDKGRLSKEEIERMVQEAEKYKAEDEIQRERVGAKNALESYAFNM 549
Query: 722 KSTIEDEKLKDKISESDRKQIVDRCQEAISWLEKNQQATK 841
KS +EDE LK KISE+D+K+++D+CQE ISWL+ N A K
Sbjct: 550 KSVVEDEGLKGKISEADKKKVLDKCQEVISWLDANTLAEK 589
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,965,586
Number of Sequences: 369166
Number of extensions: 1630368
Number of successful extensions: 5822
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5039
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5198
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8197207050
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)