Planarian EST Database


Dr_sW_019_L20

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_019_L20
         (918 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q5R644|API5_PONPY  Apoptosis inhibitor 5 (API-5)               166   1e-40
sp|Q9BZZ5|API5_HUMAN  Apoptosis inhibitor 5 (API-5) (Fibrobl...   166   1e-40
sp|Q5ZMW3|API5_CHICK  Apoptosis inhibitor 5 (API-5)               164   4e-40
sp|O35841|API5_MOUSE  Apoptosis inhibitor 5 (API-5) (AAC-11)      163   5e-40
sp|P36112|YKZ6_YEAST  Hypothetical 61.1 kDa protein in YPT52...    37   0.078
sp|Q6KC79|NIPBL_HUMAN  Nipped-B-like protein (Delangin) (SCC...    36   0.13 
sp|Q6KCD5|NPBL_MOUSE  Nipped-B-like protein (Delangin homolo...    36   0.13 
sp|Q12675|ATC4_YEAST  Probable phospholipid-transporting ATP...    35   0.39 
sp|P21555|NPY1R_RAT  Neuropeptide Y receptor type 1 (NPY1-R)...    34   0.66 
sp|Q04573|NPY1R_MOUSE  Neuropeptide Y receptor type 1 (NPY1-R)     34   0.66 
>sp|Q5R644|API5_PONPY Apoptosis inhibitor 5 (API-5)
          Length = 504

 Score =  166 bits (419), Expect = 1e-40
 Identities = 107/278 (38%), Positives = 168/278 (60%), Gaps = 6/278 (2%)
 Frame = +2

Query: 20  KVAYETILKGVNGEEKEKRLASQFIANFFKLFPQLYEESFNKLLDLCEDDNVVIRKQVIQ 199
           K AY+ IL GV G  KEKRLA+QFI  FFK FP+L + + N  LDLCED++V IR+Q I+
Sbjct: 25  KDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIK 84

Query: 200 YLSVIAKSVPDYIPKIADTLIQMLITDDNTEVSLIYSALNTVIKLDSKVALEAIFNQLIT 379
            L   A    + +P++AD L Q+L TDD+ E +L+ +AL ++ K+D+K  L  +F+Q++ 
Sbjct: 85  ELPQFATG--ENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQIL- 141

Query: 380 QLDESNELINTFAFKYLNEKFSTEND--FKSEIETLIETHGTKLLTKLSGKDEFPLLIGI 553
              +  +++   A K+L+ K  T  D     E+E LI T   K+L  ++G +EF L + I
Sbjct: 142 ---QGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTG-EEFVLFMKI 197

Query: 554 LSSLKSNSTLVGRQKLLTEISEQAKLIGKVN-TNAKYTTLLLNC-KQAIKLVSKNVHADD 727
           LS LKS  T+ GRQ+L+  ++EQA L    N ++      LL C +QA+ L SKNVH+  
Sbjct: 198 LSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTR 257

Query: 728 LLMVLLDN-LANIVKLSSSAAELNL-YDLLRCLVELTN 835
            +    +  L N+  L++    L++  ++L+ L E+++
Sbjct: 258 FVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSS 295
>sp|Q9BZZ5|API5_HUMAN Apoptosis inhibitor 5 (API-5) (Fibroblast growth factor
           2-interacting factor) (FIF) (XAGL protein) (AAC-11)
          Length = 510

 Score =  166 bits (419), Expect = 1e-40
 Identities = 107/278 (38%), Positives = 168/278 (60%), Gaps = 6/278 (2%)
 Frame = +2

Query: 20  KVAYETILKGVNGEEKEKRLASQFIANFFKLFPQLYEESFNKLLDLCEDDNVVIRKQVIQ 199
           K AY+ IL GV G  KEKRLA+QFI  FFK FP+L + + N  LDLCED++V IR+Q I+
Sbjct: 25  KDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIK 84

Query: 200 YLSVIAKSVPDYIPKIADTLIQMLITDDNTEVSLIYSALNTVIKLDSKVALEAIFNQLIT 379
            L   A    + +P++AD L Q+L TDD+ E +L+ +AL ++ K+D+K  L  +F+Q++ 
Sbjct: 85  ELPQFATG--ENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQIL- 141

Query: 380 QLDESNELINTFAFKYLNEKFSTEND--FKSEIETLIETHGTKLLTKLSGKDEFPLLIGI 553
              +  +++   A K+L+ K  T  D     E+E LI T   K+L  ++G +EF L + I
Sbjct: 142 ---QGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTG-EEFVLFMKI 197

Query: 554 LSSLKSNSTLVGRQKLLTEISEQAKLIGKVN-TNAKYTTLLLNC-KQAIKLVSKNVHADD 727
           LS LKS  T+ GRQ+L+  ++EQA L    N ++      LL C +QA+ L SKNVH+  
Sbjct: 198 LSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTR 257

Query: 728 LLMVLLDN-LANIVKLSSSAAELNL-YDLLRCLVELTN 835
            +    +  L N+  L++    L++  ++L+ L E+++
Sbjct: 258 FVTYFCEQVLPNLGTLTTPVEGLDIQLEVLKLLAEMSS 295
>sp|Q5ZMW3|API5_CHICK Apoptosis inhibitor 5 (API-5)
          Length = 523

 Score =  164 bits (414), Expect = 4e-40
 Identities = 105/278 (37%), Positives = 167/278 (60%), Gaps = 6/278 (2%)
 Frame = +2

Query: 20  KVAYETILKGVNGEEKEKRLASQFIANFFKLFPQLYEESFNKLLDLCEDDNVVIRKQVIQ 199
           K AY+ IL GV G  KEKRLA+QFI  FFK FP+L + + N  LDLCED++V IR+Q I+
Sbjct: 25  KDAYQVILDGVKGGAKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIK 84

Query: 200 YLSVIAKSVPDYIPKIADTLIQMLITDDNTEVSLIYSALNTVIKLDSKVALEAIFNQLIT 379
            L   A    D +P++AD L Q+L +DD+ E +L+ +AL ++ K+D+K  L  +F+Q++ 
Sbjct: 85  ELPQFATG--DNLPRVADILTQLLQSDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQIL- 141

Query: 380 QLDESNELINTFAFKYLNEKFST--ENDFKSEIETLIETHGTKLLTKLSGKDEFPLLIGI 553
              +  +++   A K+L+ K  T  E     E+E  I     K+L  ++G +EF L + I
Sbjct: 142 ---QGEDIVRERAIKFLSTKLKTLPEEVLTKEVEEFILAESKKVLEDVTG-EEFVLFMKI 197

Query: 554 LSSLKSNSTLVGRQKLLTEISEQAKLIGKVN-TNAKYTTLLLNC-KQAIKLVSKNVHADD 727
           LS LKS  T+ GRQ+L+  ++EQA L    N ++      LL C +QA+ L SKNVH+  
Sbjct: 198 LSGLKSLQTVSGRQQLVELVAEQADLEQTFNPSDPDCVDRLLQCTRQAVPLFSKNVHSTK 257

Query: 728 LLMVLLDN-LANIVKLSSSAAELNL-YDLLRCLVELTN 835
            +    ++ L N+  L++    L++  ++L+ L E+++
Sbjct: 258 FVTYFCEHVLPNLSALTTPVEGLDIQLEVLKLLAEMSS 295
>sp|O35841|API5_MOUSE Apoptosis inhibitor 5 (API-5) (AAC-11)
          Length = 504

 Score =  163 bits (413), Expect = 5e-40
 Identities = 106/278 (38%), Positives = 167/278 (60%), Gaps = 6/278 (2%)
 Frame = +2

Query: 20  KVAYETILKGVNGEEKEKRLASQFIANFFKLFPQLYEESFNKLLDLCEDDNVVIRKQVIQ 199
           K AY+ IL GV G  KEKRLA+QFI  FFK FP+L + + N  LDLCED++V IR+Q I+
Sbjct: 25  KDAYQVILDGVKGGTKEKRLAAQFIPKFFKHFPELADSAINAQLDLCEDEDVSIRRQAIK 84

Query: 200 YLSVIAKSVPDYIPKIADTLIQMLITDDNTEVSLIYSALNTVIKLDSKVALEAIFNQLIT 379
            L   A    + +P++AD L Q+L TDD+ E +L+ +AL ++ K+D+K  L  +F+Q++ 
Sbjct: 85  ELPQFATG--ENLPRVADILTQLLQTDDSAEFNLVNNALLSIFKMDAKGTLGGLFSQIL- 141

Query: 380 QLDESNELINTFAFKYLNEKFSTEND--FKSEIETLIETHGTKLLTKLSGKDEFPLLIGI 553
              +  +++   A K+L+ K  T  D     E+E LI T   K+L  ++G +EF L + I
Sbjct: 142 ---QGEDIVRERAIKFLSTKLKTLPDEVLTKEVEELILTESKKVLEDVTG-EEFVLFMKI 197

Query: 554 LSSLKSNSTLVGRQKLLTEISEQAKLIGKVN-TNAKYTTLLLNC-KQAIKLVSKNVHADD 727
           LS LKS  T+ GRQ+L+  ++EQA L    + ++      LL C +QA+ L SKNVH+  
Sbjct: 198 LSGLKSLQTVSGRQQLVELVAEQADLEQAFSPSDPDCVDRLLQCTRQAVPLFSKNVHSTR 257

Query: 728 LLMVLLDN-LANIVKLSSSAAELNL-YDLLRCLVELTN 835
            +    +  L N+  L++    L++  ++L  L E+++
Sbjct: 258 FVTYFCEQVLPNLSTLTTPVEGLDIQLEVLNLLAEMSS 295
>sp|P36112|YKZ6_YEAST Hypothetical 61.1 kDa protein in YPT52-DBP7 intergenic region
          Length = 540

 Score = 37.0 bits (84), Expect = 0.078
 Identities = 45/225 (20%), Positives = 96/225 (42%), Gaps = 3/225 (1%)
 Frame = +2

Query: 116 PQLYE--ESFNKLLDLCEDDNVVIRKQVIQYLSVIAKSVPDYIPKIADTLIQMLITDDNT 289
           PQL E   S N L++   D N+ I +     +    +++   + ++ +TL + L      
Sbjct: 144 PQLKEIIGSLNDLINSLNDSNLSIPESEFNSIKKSNQNMLTNLSQLNETLKEALSNYMIQ 203

Query: 290 EVSLIYSALNTVIKLDSKVALEAIFNQLITQLDESNELINTFAFKYLNEKFSTENDFKSE 469
             S + + LNT  +   +   + +   L+ ++DE  E +     K L EK       K+ 
Sbjct: 204 RTSEVITELNTQYENSKREFEKNLQKNLLQEVDEFKENLTKQKDKELEEK------LKAN 257

Query: 470 IETLIETHGTKL-LTKLSGKDEFPLLIGILSSLKSNSTLVGRQKLLTEISEQAKLIGKVN 646
            E L   H  ++ L  ++   EF  +I      + N  L   +++ +E+++ +K I + +
Sbjct: 258 EELLQAKHANEVGLLSITQVKEFNKIIKDKIEKERNGRLAHLEEINSEVNDLSKSIDRSS 317

Query: 647 TNAKYTTLLLNCKQAIKLVSKNVHADDLLMVLLDNLANIVKLSSS 781
                   L+     +  +   ++ ++L  V +D   + +KL S+
Sbjct: 318 KILSKNEALVQLTFQVDEIKSRINNNNLPDVNIDKELSRLKLLSN 362
>sp|Q6KC79|NIPBL_HUMAN Nipped-B-like protein (Delangin) (SCC2 homolog)
          Length = 2804

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
 Frame = +2

Query: 44   KGVNGEEKE-----KRLASQFIANFFKLFPQLYEESFNKLLDLCEDDNVVIRKQVIQYLS 208
            +GV+G   +     +  A + +  F    PQL E+ ++ L++   D  + +RK+VI+ L 
Sbjct: 1814 RGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILR 1873

Query: 209  VIAKSVPDYIPKIADTLIQML 271
             I    P + PKI +  ++M+
Sbjct: 1874 DICIEQPTF-PKITEMCVKMI 1893
>sp|Q6KCD5|NPBL_MOUSE Nipped-B-like protein (Delangin homolog) (SCC2 homolog)
          Length = 2798

 Score = 36.2 bits (82), Expect = 0.13
 Identities = 22/81 (27%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
 Frame = +2

Query: 44   KGVNGEEKE-----KRLASQFIANFFKLFPQLYEESFNKLLDLCEDDNVVIRKQVIQYLS 208
            +GV+G   +     +  A + +  F    PQL E+ ++ L++   D  + +RK+VI+ L 
Sbjct: 1808 RGVHGRLMDNSTSVREAAVELLGRFVLCRPQLAEQYYDMLIERILDTGISVRKRVIKILR 1867

Query: 209  VIAKSVPDYIPKIADTLIQML 271
             I    P + PKI +  ++M+
Sbjct: 1868 DICIEQPTF-PKITEMCVKMI 1887
>sp|Q12675|ATC4_YEAST Probable phospholipid-transporting ATPase DNF2
          Length = 1612

 Score = 34.7 bits (78), Expect = 0.39
 Identities = 27/125 (21%), Positives = 58/125 (46%), Gaps = 2/125 (1%)
 Frame = +2

Query: 128  EESFNKLLDLCEDDNVVIRKQVIQYLSVIAKSVPDYIPKIADTLIQM-LITDDNTEVSLI 304
            EE  +K+ D+ E + +++    I+    +   VPD I  +A+  I++ ++T D  E ++ 
Sbjct: 984  EEELDKVTDVIERELILLGGTAIE--DRLQDGVPDSIALLAEAGIKLWVLTGDKVETAIN 1041

Query: 305  YSALNTVIKLDSKVALEAIFNQLITQL-DESNELINTFAFKYLNEKFSTENDFKSEIETL 481
                  V+  D ++ +     + + +   +  +++N    KYL EKF      + E++  
Sbjct: 1042 IGFSCNVLNNDMELLVVKASGEDVEEFGSDPIQVVNNLVTKYLREKFGMSGS-EEELKEA 1100

Query: 482  IETHG 496
               HG
Sbjct: 1101 KREHG 1105
>sp|P21555|NPY1R_RAT Neuropeptide Y receptor type 1 (NPY1-R) (FC5)
          Length = 382

 Score = 33.9 bits (76), Expect = 0.66
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -1

Query: 633 INLACSDISVSNFCRPTRVEFDLSDDKIPINNGNSSFPESL--VNNFVPCVSIRVSISDL 460
           +NL+ SD+ V+  C P    + L D  +        F E++  +N FV CVSI VSI  L
Sbjct: 79  VNLSFSDLLVAVMCLPFTFVYTLMDHWV--------FGETMCKLNPFVQCVSITVSIFSL 130

Query: 459 KSFSVE 442
              +VE
Sbjct: 131 VLIAVE 136
>sp|Q04573|NPY1R_MOUSE Neuropeptide Y receptor type 1 (NPY1-R)
          Length = 382

 Score = 33.9 bits (76), Expect = 0.66
 Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
 Frame = -1

Query: 633 INLACSDISVSNFCRPTRVEFDLSDDKIPINNGNSSFPESL--VNNFVPCVSIRVSISDL 460
           +NL+ SD+ V+  C P    + L D  +        F E++  +N FV CVSI VSI  L
Sbjct: 79  VNLSFSDLLVAVMCLPFTFVYTLMDHWV--------FGETMCKLNPFVQCVSITVSIFSL 130

Query: 459 KSFSVE 442
              +VE
Sbjct: 131 VLIAVE 136
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,958,822
Number of Sequences: 369166
Number of extensions: 1807118
Number of successful extensions: 5416
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5159
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5394
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9366655350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)