Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_K19
(820 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin) 499 e-141
sp|P68372|TBBX_MOUSE Tubulin beta-? chain >gi|55977480|sp|P... 499 e-141
sp|P30883|TBB4_XENLA Tubulin beta-4 chain 498 e-140
sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin) 496 e-140
sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin cla... 495 e-140
sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain >gi|56754798|sp|P... 494 e-140
sp|P02554|TBB_PIG Tubulin beta chain 494 e-139
sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin) 494 e-139
sp|O17449|TBB1_MANSE Tubulin beta-1 chain (Beta-1 tubulin) 494 e-139
sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain 493 e-139
>sp|P11833|TBB_PARLI Tubulin beta chain (Beta tubulin)
Length = 447
Score = 499 bits (1286), Expect = e-141
Identities = 244/268 (91%), Positives = 249/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
GTYHGDSDLQLERINVYYNEA+GGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FG
Sbjct: 34 GTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 214 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVPELTQQMFDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|P68372|TBBX_MOUSE Tubulin beta-? chain
sp|P68371|TBBX_HUMAN Tubulin beta-? chain (Tubulin beta-2 chain)
Length = 445
Score = 499 bits (1286), Expect = e-141
Identities = 244/268 (91%), Positives = 249/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
GTYHGDSDLQLERINVYYNEA+GGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FG
Sbjct: 34 GTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 214 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVPELTQQMFDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|P30883|TBB4_XENLA Tubulin beta-4 chain
Length = 445
Score = 498 bits (1281), Expect = e-140
Identities = 243/268 (90%), Positives = 248/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
G YHGDSDLQLERINVYYNEA+GGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FG
Sbjct: 34 GAYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 214 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVPELTQQMFDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|Q24560|TBB1_DROME Tubulin beta-1 chain (Beta-1 tubulin)
Length = 447
Score = 496 bits (1276), Expect = e-140
Identities = 242/268 (90%), Positives = 247/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
G YHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FG
Sbjct: 34 GAYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKLTTPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 214 TLKLTTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVPELTQQMFDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|P09206|TBB3_CHICK Tubulin beta-3 chain (Beta-tubulin class-IV)
Length = 445
Score = 495 bits (1275), Expect = e-140
Identities = 242/268 (90%), Positives = 248/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
GTYHGDSDLQLERINVYYNEA+GGKYVPRAVLVDLEPGTMDSVR+GPF Q+FRPDNF+FG
Sbjct: 34 GTYHGDSDLQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGPFRQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 214 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVP+LTQQMFDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPDLTQQMFDAKNMMA 301
>sp|Q7JJU6|TBB2_PANTR Tubulin beta-2 chain
sp|P69895|TBB2_MACMU Tubulin beta-2 chain
sp|P07437|TBB2_HUMAN Tubulin beta-2 chain
sp|P09244|TBB7_CHICK Tubulin beta-7 chain (Tubulin beta 4')
sp|P99024|TBB5_MOUSE Tubulin beta-5 chain
sp|P69897|TBB5_RAT Tubulin beta-5 chain
sp|P69893|TBB1_CRIGR Tubulin beta-1 chain (Beta-tubulin isotype I) (Class I beta
tubulin)
Length = 444
Score = 494 bits (1273), Expect = e-140
Identities = 240/268 (89%), Positives = 249/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
GTYHGDSDLQL+RI+VYYNEA+GGKYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FG
Sbjct: 34 GTYHGDSDLQLDRISVYYNEATGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 214 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVPELTQQ+FDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPELTQQVFDAKNMMA 301
>sp|P02554|TBB_PIG Tubulin beta chain
Length = 445
Score = 494 bits (1272), Expect = e-139
Identities = 240/268 (89%), Positives = 248/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
G+YHGDSDLQLERINVYYNEA+G KYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FG
Sbjct: 34 GSYHGDSDLQLERINVYYNEAAGNKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVDSVLDVVRKE+ESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDSVLDVVRKESESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 214 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVPELTQQMFDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|Q91240|TBB_PSEAM Tubulin beta chain (Beta tubulin)
Length = 445
Score = 494 bits (1272), Expect = e-139
Identities = 241/269 (89%), Positives = 249/269 (92%)
Frame = +1
Query: 13 AGTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIF 192
+GTYHGD++LQLERINVYYNEA+GGKYVPRAVLVDLEPGTMDSVR+G FGQ+FRPDNF+F
Sbjct: 33 SGTYHGDNELQLERINVYYNEATGGKYVPRAVLVDLEPGTMDSVRSGAFGQIFRPDNFVF 92
Query: 193 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXX 372
GQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 93 GQSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLI 152
Query: 373 XKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICF 552
KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICF
Sbjct: 153 SKIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICF 212
Query: 553 RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 732
RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP
Sbjct: 213 RTLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAP 272
Query: 733 LTSRGSQQYRALTVPELTQQMFDAKNMMA 819
LTSRGSQQYRALTVPELTQQMFDAKNMMA
Sbjct: 273 LTSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|O17449|TBB1_MANSE Tubulin beta-1 chain (Beta-1 tubulin)
Length = 447
Score = 494 bits (1271), Expect = e-139
Identities = 240/268 (89%), Positives = 247/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
G YHGDSDLQLERINVYYNEASGGKYVPRA+LVDLEPGTMDSVR+GPFGQ+FRPDNF+FG
Sbjct: 34 GAYHGDSDLQLERINVYYNEASGGKYVPRAILVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREEYPDRIMNT+SVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEYPDRIMNTYSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKL+TPTYGDLNHLVS TMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL
Sbjct: 214 TLKLSTPTYGDLNHLVSLTMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVPELTQQMFDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPELTQQMFDAKNMMA 301
>sp|Q9D6F9|TBB4_MOUSE Tubulin beta-4 chain
Length = 444
Score = 493 bits (1268), Expect = e-139
Identities = 240/268 (89%), Positives = 247/268 (92%)
Frame = +1
Query: 16 GTYHGDSDLQLERINVYYNEASGGKYVPRAVLVDLEPGTMDSVRAGPFGQLFRPDNFIFG 195
GTYHGDSDLQLERINVYYNEA+GG YVPRAVLVDLEPGTMDSVR+GPFGQ+FRPDNF+FG
Sbjct: 34 GTYHGDSDLQLERINVYYNEATGGNYVPRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFG 93
Query: 196 QSGAGNNWAKGHYTEGAELVDSVLDVVRKEAESCDCLQGFQXXXXXXXXXXXXXXXXXXX 375
QSGAGNNWAKGHYTEGAELVD+VLDVVRKEAESCDCLQGFQ
Sbjct: 94 QSGAGNNWAKGHYTEGAELVDAVLDVVRKEAESCDCLQGFQLTHSLGGGTGSGMGTLLIS 153
Query: 376 KIREEYPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETFCIDNEALYDICFR 555
KIREE+PDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDET+CIDNEALYDICFR
Sbjct: 154 KIREEFPDRIMNTFSVVPSPKVSDTVVEPYNATLSVHQLVENTDETYCIDNEALYDICFR 213
Query: 556 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPL 735
TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPG APL
Sbjct: 214 TLKLTTPTYGDLNHLVSATMSGVTTCLRFPGQLNADLRKLAVNMVPFPRLHFFMPGLAPL 273
Query: 736 TSRGSQQYRALTVPELTQQMFDAKNMMA 819
TSRGSQQYRALTVPELTQQMFDAKNMMA
Sbjct: 274 TSRGSQQYRALTVPELTQQMFDAKNMMA 301
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,486,036
Number of Sequences: 369166
Number of extensions: 1879624
Number of successful extensions: 5490
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4862
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5056
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7859674995
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)