Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_K14
(1019 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) ... 320 4e-87
sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted ... 317 3e-86
sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathe... 317 3e-86
sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathe... 311 1e-84
sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathe... 308 2e-83
sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Catheps... 307 3e-83
sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor 306 8e-83
sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precu... 303 7e-82
sp|P25784|CYSP3_HOMAM Digestive cysteine proteinase 3 precu... 302 1e-81
sp|Q9GLE3|CATK_PIG Cathepsin K precursor 301 3e-81
>sp|O60911|CATL2_HUMAN Cathepsin L2 precursor (Cathepsin V) (Cathepsin U)
Length = 334
Score = 320 bits (820), Expect = 4e-87
Identities = 163/315 (51%), Positives = 204/315 (64%), Gaps = 5/315 (1%)
Frame = +3
Query: 3 AVPQKFSVNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTY 182
AVP KF N L+ +W +K T R Y + RR +WE+N+K I+ HN EY GKH +
Sbjct: 17 AVP-KFDQN--LDTKWYQWKATHRRLYGANEEGWRRAVWEKNMKMIELHNGEYSQGKHGF 73
Query: 183 SLGLNQFADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKN 362
++ +N F DMTNEEF+ + +G + + +G + P + LP SVDWR+KGYVTPVKN
Sbjct: 74 TMAMNAFGDMTNEEFR-QMMGCFRNQKFRKGKVFREPLFLD-LPKSVDWRKKGYVTPVKN 131
Query: 363 QQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIK 542
Q+QCGSCW+FSATG+LEGQ FRK +L+S SEQ LVDCS M AF+Y+K
Sbjct: 132 QKQCGSCWAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGFMARAFQYVK 191
Query: 543 DQ-GIESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAID 719
+ G++SE YPY A D CK P V TGFT + E L AVATVGP+SVA+D
Sbjct: 192 ENGGLDSEESYPYVAVDEICKYRPENSVANDTGFTVVAPGKEKALMKAVATVGPISVAMD 251
Query: 720 AGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYG----TQIGKKYWIVKNSWDVTWGESG 887
AGH+SFQ YKSGIY E CS+ LDHGVL VGYG KYW+VKNSW WG +G
Sbjct: 252 AGHSSFQFYKSGIYFEPDCSSKNLDHGVLVVGYGFEGANSNNSKYWLVKNSWGPEWGSNG 311
Query: 888 YIKMSKDKKNQCGIA 932
Y+K++KDK N CGIA
Sbjct: 312 YVKIAKDKNNHCGIA 326
>sp|P07711|CATL_HUMAN Cathepsin L precursor (Major excreted protein) (MEP) [Contains:
Cathepsin L heavy chain; Cathepsin L light chain]
Length = 333
Score = 317 bits (813), Expect = 3e-86
Identities = 161/304 (52%), Positives = 196/304 (64%), Gaps = 5/304 (1%)
Frame = +3
Query: 36 LNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMT 215
L +W +K R Y + RR +WE+N+K I+ HN EY GKH++++ +N F DMT
Sbjct: 25 LEAQWTKWKAMHNRLYGMNEEGWRRAVWEKNMKMIELHNQEYREGKHSFTMAMNAFGDMT 84
Query: 216 NEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFS 395
+EEF+ G KP +G + P P SVDWR+KGYVTPVKNQ QCGSCW+FS
Sbjct: 85 SEEFRQVMNGFQNRKPR-KGKVFQEPLFYEA-PRSVDWREKGYVTPVKNQGQCGSCWAFS 142
Query: 396 ATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESEGDY 572
ATG+LEGQ FRK RLIS SEQ LVDCS LMD AF+Y++D G++SE Y
Sbjct: 143 ATGALEGQMFRKTGRLISLSEQNLVDCSGPQGNEGCNGGLMDYAFQYVQDNGGLDSEESY 202
Query: 573 PYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKS 752
PY AT+ +CK NP V TGF DI Q E L AVATVGP+SVAIDAGH SF YK
Sbjct: 203 PYEATEESCKYNPKYSVANDTGFVDIPKQ-EKALMKAVATVGPISVAIDAGHESFLFYKE 261
Query: 753 GIYNEESCSTTQLDHGVLAVGYGTQI----GKKYWIVKNSWDVTWGESGYIKMSKDKKNQ 920
GIY E CS+ +DHGVL VGYG + KYW+VKNSW WG GY+KM+KD++N
Sbjct: 262 GIYFEPDCSSEDMDHGVLVVGYGFESTESDNNKYWLVKNSWGEEWGMGGYVKMAKDRRNH 321
Query: 921 CGIA 932
CGIA
Sbjct: 322 CGIA 325
>sp|Q9GL24|CATL_CANFA Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 333
Score = 317 bits (812), Expect = 3e-86
Identities = 162/307 (52%), Positives = 196/307 (63%), Gaps = 5/307 (1%)
Frame = +3
Query: 27 NSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFA 206
+ LN +W +K T R Y + RR +WE+N+K I+ HN EY GKH +++ +N F
Sbjct: 22 DQSLNAQWYQWKATHRRLYGMNEEGWRRAVWEKNMKMIELHNREYSQGKHGFTMAMNAFG 81
Query: 207 DMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCW 386
DMTNEEF+ G K +G + P +P SVDWR+KGYVTPVKNQ QCGSCW
Sbjct: 82 DMTNEEFRQVMNGFQNQKHK-KGKMFQEPL-FAEIPKSVDWREKGYVTPVKNQGQCGSCW 139
Query: 387 SFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIESE 563
+FSATG+LEGQ FRK +L+S SEQ LVDCS LMDNAFRY+KD G++SE
Sbjct: 140 AFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNEGCNGGLMDNAFRYVKDNGGLDSE 199
Query: 564 GDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQ 740
YPY D TC P TGF D+ Q E L AVAT+GP+SVAIDAGH SFQ
Sbjct: 200 ESYPYLGRDTETCNYKPECSAANDTGFVDL-PQREKALMKAVATLGPISVAIDAGHQSFQ 258
Query: 741 LYKSGIYNEESCSTTQLDHGVLAVGY---GTQIGKKYWIVKNSWDVTWGESGYIKMSKDK 911
YKSGIY + CS+ LDHGVL VGY GT K+WIVKNSW WG +GY+KM+KD+
Sbjct: 259 FYKSGIYFDPDCSSKDLDHGVLVVGYGFEGTDSNNKFWIVKNSWGPEWGWNGYVKMAKDQ 318
Query: 912 KNQCGIA 932
N CGIA
Sbjct: 319 NNHCGIA 325
>sp|P25975|CATL_BOVIN Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 311 bits (798), Expect = 1e-84
Identities = 163/309 (52%), Positives = 194/309 (62%), Gaps = 6/309 (1%)
Frame = +3
Query: 24 VNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQF 203
++ L+ W +K T R Y + RR +WE+N K I HN EY GKH + + +N F
Sbjct: 21 LDPNLDAHWHQWKATHRRLYGMNEEEWRRAVWEKNKKIIDLHNQEYSEGKHAFRMAMNAF 80
Query: 204 ADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSC 383
DMTNEEF+ G K +G + P + V P SVDW +KGYVTPVKNQ QCGSC
Sbjct: 81 GDMTNEEFRQVMNGFQNQKHK-KGKLFHEPLLVDV-PKSVDWTKKGYVTPVKNQGQCGSC 138
Query: 384 WSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIES 560
W+FSATG+LEGQ FRK +L+S SEQ LVDCS LMDNAF+YIKD G++S
Sbjct: 139 WAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRAQGNQGCNGGLMDNAFQYIKDNGGLDS 198
Query: 561 EGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASF 737
E YPY ATD +C P TGF DI Q E L AVATVGP+SVAIDAGH SF
Sbjct: 199 EESYPYLATDTNSCNYKPECSAANDTGFVDI-PQREKALMKAVATVGPISVAIDAGHTSF 257
Query: 738 QLYKSGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWGESGYIKMSK 905
Q YKSGIY + CS LDHGVL VGYG + K+WIVKNSW WG +GY+KM+K
Sbjct: 258 QFYKSGIYYDPDCSCKDLDHGVLVVGYGFEGTDSNNNKFWIVKNSWGPEWGWNGYVKMAK 317
Query: 906 DKKNQCGIA 932
D+ N CGIA
Sbjct: 318 DQNNHCGIA 326
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 339
Score = 308 bits (788), Expect = 2e-83
Identities = 162/320 (50%), Positives = 203/320 (63%), Gaps = 10/320 (3%)
Frame = +3
Query: 3 AVPQKFSVNSELNEEWETYKTTFGRKY-DELTDITRRLIWEQNLKYIQKHNLEYDLGKHT 179
A+ Q S + EEW TYK + Y +E+ + R I+ +N I KHN + GK +
Sbjct: 13 ALTQAISPLDLIKEEWHTYKLQHRKNYANEVEERFRMKIFNENRHKIAKHNQLFAQGKVS 72
Query: 180 YSLGLNQFADMTNEEFKAKYLG-------IMKTKPTLEGSTYMAPENIGVLPASVDWRQK 338
Y LGLN++ADM + EFK G +M+ + L G+TY+ P ++ V P SVDWR+
Sbjct: 73 YKLGLNKYADMLHHEFKETMNGYNHTLRQLMRERTGLVGATYIPPAHVTV-PKSVDWREH 131
Query: 339 GYVTPVKNQQQCGSCWSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLM 518
G VT VK+Q CGSCW+FS+TG+LEGQ+FRK L+S SEQ LVDCS LM
Sbjct: 132 GAVTGVKDQGHCGSCWAFSSTGALEGQHFRKAGVLVSLSEQNLVDCSTKYGNNGCNGGLM 191
Query: 519 DNAFRYIKDQG-IESEGDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATV 695
DNAFRYIKD G I++E YPY D +C N + I TGF DI +E + AVAT+
Sbjct: 192 DNAFRYIKDNGGIDTEKSYPYEGIDDSCHFNKATIGATDTGFVDIPEGDEEKMKKAVATM 251
Query: 696 GPVSVAIDAGHASFQLYKSGIYNEESCSTTQLDHGVLAVGYGT-QIGKKYWIVKNSWDVT 872
GPVSVAIDA H SFQLY G+YNE C LDHGVL VGYGT + G YW+VKNSW T
Sbjct: 252 GPVSVAIDASHESFQLYSEGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWGTT 311
Query: 873 WGESGYIKMSKDKKNQCGIA 932
WGE GYIKM++++ NQCGIA
Sbjct: 312 WGEQGYIKMARNQNNQCGIA 331
>sp|Q28944|CATL_PIG Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
L light chain]
Length = 334
Score = 307 bits (787), Expect = 3e-83
Identities = 158/309 (51%), Positives = 198/309 (64%), Gaps = 6/309 (1%)
Frame = +3
Query: 24 VNSELNEEWETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQF 203
++ L+ +W +K T GR Y + RR +WE+N+K I+ HN EY GKH +S+ +N F
Sbjct: 21 LDQNLDADWYKWKATHGRLYGMNEEGWRRAVWEKNMKMIELHNQEYSQGKHGFSMAMNAF 80
Query: 204 ADMTNEEFKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSC 383
DMTNEEF+ G K +G + + V P SVDWR+KGYVT VKNQ QCGSC
Sbjct: 81 GDMTNEEFRQVMNGFQNQKHK-KGKVFHESLVLEV-PKSVDWREKGYVTAVKNQGQCGSC 138
Query: 384 WSFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQ-GIES 560
W+FSATG+LEGQ FRK +L+S SEQ LVDCS LMDNAF+Y+KD G+++
Sbjct: 139 WAFSATGALEGQMFRKTGKLVSLSEQNLVDCSRPQGNQGCNGGLMDNAFQYVKDNGGLDT 198
Query: 561 EGDYPYTATD-GTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASF 737
E YPY + +C P TGF DI Q E L AVATVGP+SVAIDAGH+SF
Sbjct: 199 EESYPYLGRETNSCTYKPECSAANDTGFVDI-PQREKALMKAVATVGPISVAIDAGHSSF 257
Query: 738 QLYKSGIYNEESCSTTQLDHGVLAVGYGTQ----IGKKYWIVKNSWDVTWGESGYIKMSK 905
Q YKSGIY + CS+ LDHGVL VGYG + K+WIVKNSW WG +GY+KM+K
Sbjct: 258 QFYKSGIYYDPDCSSKDLDHGVLVVGYGFEGTDSNSSKFWIVKNSWGPEWGWNGYVKMAK 317
Query: 906 DKKNQCGIA 932
D+ N CGI+
Sbjct: 318 DQNNHCGIS 326
>sp|Q24940|CATLP_FASHE Cathepsin L-like proteinase precursor
Length = 326
Score = 306 bits (783), Expect = 8e-83
Identities = 145/295 (49%), Positives = 192/295 (65%)
Frame = +3
Query: 48 WETYKTTFGRKYDELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEEF 227
W +K + ++Y+ D RR IWE+N+K+IQ+HNL +DLG TY+LGLNQF DMT EEF
Sbjct: 21 WHQWKRMYNKEYNGADDQHRRNIWEKNVKHIQEHNLRHDLGLVTYTLGLNQFTDMTFEEF 80
Query: 228 KAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATGS 407
KAKYL M + N +P +DWR+ GYVT VK+Q CGSCW+FS TG+
Sbjct: 81 KAKYLTEMSRASDILSHGVPYEANNRAVPDKIDWRESGYVTEVKDQGNCGSCWAFSTTGT 140
Query: 408 LEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQGIESEGDYPYTAT 587
+EGQY + ISFSEQQLVDCS LM+NA++Y+K G+E+E YPYTA
Sbjct: 141 MEGQYMKNERTSISFSEQQLVDCSGPWGNNGCSGGLMENAYQYLKQFGLETESSYPYTAV 200
Query: 588 DGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSGIYNE 767
+G C+ N V K TG+ + S +E +L N V P +VA+D + F +Y+SGIY
Sbjct: 201 EGQCRYNKQLGVAKVTGYYTVHSGSEVELKNLVGARRPAAVAVDV-ESDFMMYRSGIYQS 259
Query: 768 ESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGESGYIKMSKDKKNQCGIA 932
++CS +++H VLAVGYGTQ G YWIVKNSW WGE GYI+M++++ N CGIA
Sbjct: 260 QTCSPLRVNHAVLAVGYGTQGGTDYWIVKNSWGTYWGERGYIRMARNRGNMCGIA 314
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
Length = 323
Score = 303 bits (775), Expect = 7e-82
Identities = 149/297 (50%), Positives = 201/297 (67%), Gaps = 2/297 (0%)
Frame = +3
Query: 48 WETYKTTFGRKY-DELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEE 224
WE +K +GR+Y D D RR+I+EQN KYI++ N +Y+ G+ T++L +N+F DMT EE
Sbjct: 20 WEHFKGKYGRQYVDAEEDSYRRVIFEQNQKYIEEFNKKYENGEVTFNLAMNKFGDMTLEE 79
Query: 225 FKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATG 404
F A G + + + S + + G VDWR KG VTPVK+Q QCGSCW+FS TG
Sbjct: 80 FNAVMKGNIPRR-SAPVSVFYPKKETGPQATEVDWRTKGAVTPVKDQGQCGSCWAFSTTG 138
Query: 405 SLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIK-DQGIESEGDYPYT 581
SLEGQ+F K LIS +EQQLVDCS M++AF YIK + GI++E YPY
Sbjct: 139 SLEGQHFLKTGSLISLAEQQLVDCSRPYGPQGCNGGWMNDAFDYIKANNGIDTEAAYPYE 198
Query: 582 ATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSGIY 761
A DG+C+ + + + C+G T+I S +ET L AV +GP+SV IDA H+SFQ Y SG+Y
Sbjct: 199 ARDGSCRFDSNSVAATCSGHTNIASGSETGLQQAVRDIGPISVTIDAAHSSFQFYSSGVY 258
Query: 762 NEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGESGYIKMSKDKKNQCGIA 932
E SCS + LDH VLAVGYG++ G+ +W+VKNSW +WG++GYIKMS+++ N CGIA
Sbjct: 259 YEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWATSWGDAGYIKMSRNRNNNCGIA 315
>sp|P25784|CYSP3_HOMAM Digestive cysteine proteinase 3 precursor
Length = 321
Score = 302 bits (773), Expect = 1e-81
Identities = 151/300 (50%), Positives = 201/300 (67%), Gaps = 2/300 (0%)
Frame = +3
Query: 48 WETYKTTFGRKY-DELTDITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADMTNEE 224
W+ +KT +GRKY D ++ R+ +++QN + I+ N +++ G+ T+ + +NQF DMTNEE
Sbjct: 20 WDHFKTQYGRKYGDAKEELYRQRVFQQNEQLIEDFNKKFENGEVTFKVAMNQFGDMTNEE 79
Query: 225 FKAKYLGIMKTKPTLEGSTYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCWSFSATG 404
F A G K + + A G + A VDWR K VTPVK+Q+QCGSCW+FSATG
Sbjct: 80 FNAVMKGYKKGSRGEPKAVFTA--EAGPMAADVDWRTKALVTPVKDQEQCGSCWAFSATG 137
Query: 405 SLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYIKDQG-IESEGDYPYT 581
+LEGQ+F KN+ L+S SEQQLVDCS M +AF YIKD G I++E YPY
Sbjct: 138 ALEGQHFLKNDELVSLSEQQLVDCSTDYGNDGCGGGWMTSAFDYIKDNGGIDTESSYPYE 197
Query: 582 ATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQLYKSGIY 761
A D +C+ + + I CTG ++Q E L AV+ VGP+SVAIDA H SFQ Y SG+Y
Sbjct: 198 AEDRSCRFDANSIGAICTGSVEVQHTEEA-LQEAVSGVGPISVAIDASHFSFQFYSSGVY 256
Query: 762 NEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGESGYIKMSKDKKNQCGIARWP 941
E++CS T LDHGVLAVGYGT+ K YW+VKNSW +WG++GYIKMS+++ N CGIA P
Sbjct: 257 YEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGSSWGDAGYIKMSRNRDNNCGIASEP 316
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor
Length = 330
Score = 301 bits (770), Expect = 3e-81
Identities = 153/303 (50%), Positives = 197/303 (65%), Gaps = 4/303 (1%)
Frame = +3
Query: 36 LNEEWETYKTTFGRKYDELTD-ITRRLIWEQNLKYIQKHNLEYDLGKHTYSLGLNQFADM 212
L+ +WE +K T+ ++Y+ D I+RRLIWE+NLK+I HNLE LG HTY L +N DM
Sbjct: 23 LDTQWELWKKTYRKQYNSKVDEISRRLIWEKNLKHISIHNLEASLGVHTYELAMNHLGDM 82
Query: 213 TNEEFKAKYLGIMKTKPTLEGS--TYMAPENIGVLPASVDWRQKGYVTPVKNQQQCGSCW 386
T+EE K G+ K P+ S T P+ G P S+D+R+KGYVTPVKNQ QCGSCW
Sbjct: 83 TSEEVVQKMTGL-KVPPSHSRSNDTLYIPDWEGRTPDSIDYRKKGYVTPVKNQGQCGSCW 141
Query: 387 SFSATGSLEGQYFRKNNRLISFSEQQLVDCSXXXXXXXXXXXLMDNAFRYI-KDQGIESE 563
+FS+ G+LEGQ +K +L++ S Q LVDC M NAF+Y+ K++GI+SE
Sbjct: 142 AFSSVGALEGQLKKKTGKLLNLSPQNLVDC--VSENDGCGGGYMTNAFQYVQKNRGIDSE 199
Query: 564 GDYPYTATDGTCKRNPSKIVTKCTGFTDIQSQNETDLANAVATVGPVSVAIDAGHASFQL 743
YPY D C NP+ KC G+ +I NE L AVA VGPVSVAIDA SFQ
Sbjct: 200 DAYPYVGQDENCMYNPTGKAAKCRGYREIPEGNEKALKRAVARVGPVSVAIDASLTSFQF 259
Query: 744 YKSGIYNEESCSTTQLDHGVLAVGYGTQIGKKYWIVKNSWDVTWGESGYIKMSKDKKNQC 923
Y G+Y +E+C++ L+H VLAVGYG Q GKK+WI+KNSW WG GYI M+++K N C
Sbjct: 260 YSKGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGENWGNKGYILMARNKNNAC 319
Query: 924 GIA 932
GIA
Sbjct: 320 GIA 322
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 115,259,097
Number of Sequences: 369166
Number of extensions: 2358283
Number of successful extensions: 6850
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6043
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6278
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10909662060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)