Planarian EST Database


Dr_sW_019_K10

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_019_K10
         (374 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9NWZ5|UCKL1_HUMAN  Uridine/cytidine kinase-like 1             129   2e-30
sp|Q91YL3|UCKL1_MOUSE  Uridine/cytidine kinase-like 1             128   4e-30
sp|P27515|URK1_YEAST  Uridine kinase (Uridine monophosphokin...    79   2e-15
sp|Q9HA47|UCK1_HUMAN  Uridine-cytidine kinase 1 (UCK 1) (Uri...    76   2e-14
sp|P52623|UCK1_MOUSE  Uridine-cytidine kinase 1 (UCK 1) (Uri...    76   3e-14
sp|Q9BZX2|UCK2_HUMAN  Uridine-cytidine kinase 2 (UCK 2) (Uri...    73   2e-13
sp|Q99PM9|UCK2_MOUSE  Uridine-cytidine kinase 2 (UCK 2) (Uri...    72   3e-13
sp|Q9VC99|UCK_DROME  Probable uridine-cytidine kinase (UCK) ...    71   9e-13
sp|Q17413|UCK_CAEEL  Probable uridine-cytidine kinase (UCK) ...    69   4e-12
sp|Q6G8V8|URK_STAAS  Uridine kinase (Uridine monophosphokina...    66   2e-11
>sp|Q9NWZ5|UCKL1_HUMAN Uridine/cytidine kinase-like 1
          Length = 548

 Score =  129 bits (324), Expect = 2e-30
 Identities = 62/94 (65%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
 Frame = +1

Query: 88  KRTIYTAGRPPWYTADG-QLKEPFVIGICGGSASGKTTVANTIIENLNIPWVSLVCMDSF 264
           KRTIYTAGRPPWY   G Q KE F IG+ GGSASGKTTVA  IIE L++PWV L+ MDSF
Sbjct: 76  KRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSF 135

Query: 265 YKVLSADEKLEASKSNYNFDHPSAFDIDLIVQTL 366
           YKVL+  ++ +A+ +N+NFDHP AFD DLI+ TL
Sbjct: 136 YKVLTEQQQEQAAHNNFNFDHPDAFDFDLIISTL 169
>sp|Q91YL3|UCKL1_MOUSE Uridine/cytidine kinase-like 1
          Length = 548

 Score =  128 bits (322), Expect = 4e-30
 Identities = 62/94 (65%), Positives = 74/94 (78%), Gaps = 1/94 (1%)
 Frame = +1

Query: 88  KRTIYTAGRPPWYTADG-QLKEPFVIGICGGSASGKTTVANTIIENLNIPWVSLVCMDSF 264
           KRTIYTAGRPPWY   G Q KE F IG+ GGSASGKTTVA  IIE L++PWV L+ MDSF
Sbjct: 76  KRTIYTAGRPPWYNEHGTQSKEAFAIGLGGGSASGKTTVARMIIEALDVPWVVLLSMDSF 135

Query: 265 YKVLSADEKLEASKSNYNFDHPSAFDIDLIVQTL 366
           YKVL+  ++ +A+ +N+NFDHP AFD DLI+ TL
Sbjct: 136 YKVLTQQQQEQAACNNFNFDHPDAFDFDLIISTL 169
>sp|P27515|URK1_YEAST Uridine kinase (Uridine monophosphokinase)
          Length = 501

 Score = 79.3 bits (194), Expect = 2e-15
 Identities = 34/85 (40%), Positives = 55/85 (64%)
 Frame = +1

Query: 115 PPWYTADGQLKEPFVIGICGGSASGKTTVANTIIENLNIPWVSLVCMDSFYKVLSADEKL 294
           PPW T       P++IGI G S SGKT+VA  I+ ++N+PW  L+ +D+FY  L  +++ 
Sbjct: 51  PPWTT-------PYIIGIGGASGSGKTSVAAKIVSSINVPWTVLISLDNFYNPLGPEDRA 103

Query: 295 EASKSNYNFDHPSAFDIDLIVQTLI 369
            A K+ Y+FD P+A ++DL  + ++
Sbjct: 104 RAFKNEYDFDEPNAINLDLAYKCIL 128
>sp|Q9HA47|UCK1_HUMAN Uridine-cytidine kinase 1 (UCK 1) (Uridine monophosphokinase 1)
           (Cytidine monophosphokinase 1)
          Length = 277

 Score = 76.3 bits (186), Expect = 2e-14
 Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 7/86 (8%)
 Frame = +1

Query: 130 ADGQLKEPFVIGICGGSASGKTTVANTIIENLNIPWVS-------LVCMDSFYKVLSADE 288
           AD   + PF+IG+ GG+ASGK+TV   I+E L    V        ++  D FYKVL+A++
Sbjct: 16  ADRPHQRPFLIGVSGGTASGKSTVCEKIMELLGQNEVEQRQRKVVILSQDRFYKVLTAEQ 75

Query: 289 KLEASKSNYNFDHPSAFDIDLIVQTL 366
           K +A K  YNFDHP AFD DL+ +TL
Sbjct: 76  KAKALKGQYNFDHPDAFDNDLMHRTL 101
>sp|P52623|UCK1_MOUSE Uridine-cytidine kinase 1 (UCK 1) (Uridine monophosphokinase 1)
           (Cytidine monophosphokinase 1)
          Length = 277

 Score = 75.9 bits (185), Expect = 3e-14
 Identities = 41/86 (47%), Positives = 54/86 (62%), Gaps = 7/86 (8%)
 Frame = +1

Query: 130 ADGQLKEPFVIGICGGSASGKTTVANTIIENLNIPWVS-------LVCMDSFYKVLSADE 288
           AD     PF+IG+ GG+ASGK+TV   I+E L    V        ++  D FYKVL+A++
Sbjct: 16  ADRPQPRPFLIGVSGGTASGKSTVCEKIMELLGQNEVDRRQRKLVILSQDCFYKVLTAEQ 75

Query: 289 KLEASKSNYNFDHPSAFDIDLIVQTL 366
           K +A K  YNFDHP AFD DL+ +TL
Sbjct: 76  KAKALKGQYNFDHPDAFDNDLMHKTL 101
>sp|Q9BZX2|UCK2_HUMAN Uridine-cytidine kinase 2 (UCK 2) (Uridine monophosphokinase 2)
           (Cytidine monophosphokinase 2)
          Length = 261

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
 Frame = +1

Query: 148 EPFVIGICGGSASGKTTVANTIIENLNIPWVS-------LVCMDSFYKVLSADEKLEASK 306
           EPF+IG+ GG+ASGK++V   I++ L    V        ++  DSFY+VL++++K +A K
Sbjct: 19  EPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYRQKQVVILSQDSFYRVLTSEQKAKALK 78

Query: 307 SNYNFDHPSAFDIDLIVQTL 366
             +NFDHP AFD +LI++TL
Sbjct: 79  GQFNFDHPDAFDNELILKTL 98
>sp|Q99PM9|UCK2_MOUSE Uridine-cytidine kinase 2 (UCK 2) (Uridine monophosphokinase 2)
           (Cytidine monophosphokinase 2)
          Length = 261

 Score = 72.4 bits (176), Expect = 3e-13
 Identities = 36/80 (45%), Positives = 55/80 (68%), Gaps = 7/80 (8%)
 Frame = +1

Query: 148 EPFVIGICGGSASGKTTVANTIIENL-------NIPWVSLVCMDSFYKVLSADEKLEASK 306
           EPF+IG+ GG+ASGK++V   I++ L       +   V ++  DSFY+VL++++K +A K
Sbjct: 19  EPFLIGVSGGTASGKSSVCAKIVQLLGQNEVDYHQKQVVILSQDSFYRVLTSEQKAKALK 78

Query: 307 SNYNFDHPSAFDIDLIVQTL 366
             +NFDHP AFD +LI +TL
Sbjct: 79  GQFNFDHPDAFDNELIFKTL 98
>sp|Q9VC99|UCK_DROME Probable uridine-cytidine kinase (UCK) (Uridine monophosphokinase)
           (Cytidine monophosphokinase)
          Length = 260

 Score = 70.9 bits (172), Expect = 9e-13
 Identities = 37/86 (43%), Positives = 53/86 (61%), Gaps = 7/86 (8%)
 Frame = +1

Query: 130 ADGQLKEPFVIGICGGSASGKTTVANTIIENLNIP-------WVSLVCMDSFYKVLSADE 288
           A+ ++K PF+IG+ GG+ASGK+TV   I+E L           V  +  DSFY+ L+  E
Sbjct: 20  ANDEVKSPFLIGVAGGTASGKSTVCKKIMEQLGQAEMDHTQRQVVSISQDSFYRELTPAE 79

Query: 289 KLEASKSNYNFDHPSAFDIDLIVQTL 366
           K +A K  +NFDHP AF+ +L+  TL
Sbjct: 80  KAKAQKGLFNFDHPDAFNEELMYSTL 105
>sp|Q17413|UCK_CAEEL Probable uridine-cytidine kinase (UCK) (Uridine monophosphokinase)
           (Cytidine monophosphokinase)
          Length = 248

 Score = 68.6 bits (166), Expect = 4e-12
 Identities = 37/84 (44%), Positives = 52/84 (61%), Gaps = 9/84 (10%)
 Frame = +1

Query: 142 LKEPFVIGICGGSASGKTTVANTIIENLN---------IPWVSLVCMDSFYKVLSADEKL 294
           LK P +IG+ GG++ GK+T+   IIENLN         I  V L  + SFY+ LSA+EK+
Sbjct: 5   LKLPLLIGVAGGTSCGKSTIVERIIENLNANAKQSGRQIDIVHL-SLHSFYRELSAEEKI 63

Query: 295 EASKSNYNFDHPSAFDIDLIVQTL 366
            A +  +NFDHP   + DL+ +TL
Sbjct: 64  LAREGKFNFDHPDQINFDLLAETL 87
>sp|Q6G8V8|URK_STAAS Uridine kinase (Uridine monophosphokinase) (Cytidine
           monophosphokinase)
 sp|Q6GG92|URK_STAAR Uridine kinase (Uridine monophosphokinase) (Cytidine
           monophosphokinase)
 sp|Q5HFF1|URK_STAAC Uridine kinase (Uridine monophosphokinase) (Cytidine
           monophosphokinase)
 sp|P67412|URK_STAAW Uridine kinase (Uridine monophosphokinase) (Cytidine
           monophosphokinase)
 sp|P67411|URK_STAAN Uridine kinase (Uridine monophosphokinase) (Cytidine
           monophosphokinase)
 sp|P67410|URK_STAAM Uridine kinase (Uridine monophosphokinase) (Cytidine
           monophosphokinase)
          Length = 207

 Score = 66.2 bits (160), Expect = 2e-11
 Identities = 37/78 (47%), Positives = 50/78 (64%), Gaps = 3/78 (3%)
 Frame = +1

Query: 142 LKEPFVIGICGGSASGKTTVANTIIENLNIPWVSLVCMDSFY---KVLSADEKLEASKSN 312
           +K   +IGI GGS SGKTTV N I++NL    V+L+  D +Y   K L+ DE+LE     
Sbjct: 1   MKATTIIGIAGGSGSGKTTVTNEIMKNLEGHSVALLAQDYYYKDQKHLTFDERLET---- 56

Query: 313 YNFDHPSAFDIDLIVQTL 366
            N+DHP AFD DL+++ L
Sbjct: 57  -NYDHPFAFDNDLLIENL 73
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,869,924
Number of Sequences: 369166
Number of extensions: 695197
Number of successful extensions: 2931
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2839
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2881
length of database: 68,354,980
effective HSP length: 91
effective length of database: 51,544,095
effective search space used: 1700955135
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)