Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_K06
(891 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q02645|HTS_DROME Hu-li tai shao protein (Adducin-like pr... 62 3e-09
sp|Q9U9K0|ADD1_CAEEL Adducin-related protein 1 61 5e-09
sp|Q9QYC0|ADDA_MOUSE Alpha-adducin (Erythrocyte adducin alp... 43 0.001
sp|Q63028|ADDA_RAT Alpha-adducin (Erythrocyte adducin alpha... 41 0.004
sp|P35611|ADDA_HUMAN Alpha-adducin (Erythrocyte adducin alp... 40 0.009
sp|P59583|WRK32_ARATH Probable WRKY transcription factor 32... 38 0.043
sp|Q8EEU6|HSCB_SHEON Co-chaperone protein hscB homolog 37 0.074
sp|P35612|ADDB_HUMAN Beta-adducin (Erythrocyte adducin beta... 36 0.13
sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 (Generally ex... 36 0.16
sp|Q9TTA5|SMAL1_BOVIN SWI/SNF-related matrix-associated act... 36 0.16
>sp|Q02645|HTS_DROME Hu-li tai shao protein (Adducin-like protein)
Length = 1156
Score = 61.6 bits (148), Expect = 3e-09
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 9/172 (5%)
Frame = +2
Query: 29 SGADSSRKSAKWATANVPNFSAPI----PQHPITAGAYVTIGHHSKSKSDNIKDRNASTI 196
+G +K KW P S P+ P + AG
Sbjct: 462 TGTPDPKKITKWVAEGSPTHSTPVRIEDPLQFVPAGT----------------------- 498
Query: 197 NPKELLENQKRVKNKYYHDTNTAGPISCLLDSGLSREEAIKIKNESLKKHLGPTSVSPND 376
NP+E Q+ +K+ D +AGP S +L+ G++ +EA ++K+ ++ + D
Sbjct: 499 NpreFKRVQQLIKDNRRADKISAGPQSHILE-GVTWDEASRLKDATVSQ--------AGD 549
Query: 377 QVVT--SASKGIIQKG--HKAVVYQDLFKSSNPFD-VTADELAEYHKEIDRK 517
VV +ASKGIIQ+G H A VY+ + + NPFD VT DEL EY + ++RK
Sbjct: 550 HVVMMGAASKGIIQRGFQHNATVYKAPY-AKNPFDNVTDDELNEYKRTVERK 600
>sp|Q9U9K0|ADD1_CAEEL Adducin-related protein 1
Length = 732
Score = 60.8 bits (146), Expect = 5e-09
Identities = 67/247 (27%), Positives = 106/247 (42%), Gaps = 9/247 (3%)
Frame = +2
Query: 32 GADSSRKSAKWA-TANVPNFSAPIPQHPITAGAYVTIGHHSKSKSDNIKDRNASTINPKE 208
GAD+ +K KW NVP+ S P+ K ++ + ++ NPKE
Sbjct: 444 GADNPKKITKWVHDVNVPSASGT----PV--------------KISSVHQFSPASSNPKE 485
Query: 209 LLENQKRVKNKYYHDTNTAGPISCLLDSGLSREEAIKIKNESLKKHLGPTSVSPNDQVVT 388
E QK +K T +AGP S +LDS + A+ IK ++ +G +S + ++
Sbjct: 486 FKEKQKAIKENNRLGTLSAGPQSQILDSVTYEDIALLIKPDN-DGTVGQSSTADRAILIG 544
Query: 389 SASKGII--QKGHKAVVYQDLFKSSNPFDVTAD-ELAEYHKEIDRKLHPDRYKSMEMAND 559
+ASKGII Q H A VY ++ + NPF V D ++ +Y + K S
Sbjct: 545 TASKGIIDRQFQHHAQVYHQIY-APNPFSVETDADIKKYVDMVKAKNSQSAPVSARSGYS 603
Query: 560 VQCKEENPEIKITLSQNESSLPSPEIDKGDALLSRRDTDFPNQKESTTEYVN----KQNS 727
+ E + + E L + D L+ + PN ++ E VN Q+
Sbjct: 604 QYDEVEADTVSLMQGVREHKLSQAALSASDDGLNAGIS--PNNVRTSEESVNTSYMSQSV 661
Query: 728 SFEC-HP 745
F+C HP
Sbjct: 662 VFDCDHP 668
>sp|Q9QYC0|ADDA_MOUSE Alpha-adducin (Erythrocyte adducin alpha subunit)
Length = 735
Score = 42.7 bits (99), Expect = 0.001
Identities = 43/162 (26%), Positives = 73/162 (45%), Gaps = 2/162 (1%)
Frame = +2
Query: 197 NPKELLENQKRVKNKYYHDTNTAGPISCLLDSGLSREEAIKIKNESLKKHLGPTSVSPND 376
NPKE+ E + +++ + D TAGP S +L G+ + ++ ++ E
Sbjct: 495 NPKEVQEMRNKIREQNLQDIKTAGPQSQVL-CGVMMDRSL-VQGE--------------- 537
Query: 377 QVVTSASKGIIQKGHKAVVYQDLFKSSNPFDVTAD-ELAEYHKEIDRKLHPDRYKSMEMA 553
+ +ASK II+K ++ V NPF+ D EL EY +E++RK + +
Sbjct: 538 --LVTASKAIIEKEYQPHVIVST-TGPNPFNTLTDRELEEYRREVERK---QKGSEENLD 591
Query: 554 NDVQCKEENPEIKITLSQNESSLP-SPEIDKGDALLSRRDTD 676
+ KE++P + + S P E D SR D+D
Sbjct: 592 ETREQKEKSPPDQSAVPNTPPSTPVKLEEDLPQEPTSRDDSD 633
>sp|Q63028|ADDA_RAT Alpha-adducin (Erythrocyte adducin alpha subunit)
Length = 735
Score = 41.2 bits (95), Expect = 0.004
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 1/108 (0%)
Frame = +2
Query: 197 NPKELLENQKRVKNKYYHDTNTAGPISCLLDSGLSREEAIKIKNESLKKHLGPTSVSPND 376
NPKE+ E + +++ + D TAGP S +L G+ + ++ ++ E
Sbjct: 495 NPKEVQEMRNKIREQNLQDIKTAGPQSQVL-CGVMMDRSL-VQGE--------------- 537
Query: 377 QVVTSASKGIIQKGHKAVVYQDLFKSSNPFDVTAD-ELAEYHKEIDRK 517
+ +ASK II+K ++ V NPF+ D EL EY +E++RK
Sbjct: 538 --LVTASKAIIEKEYQPHVIVST-TGPNPFNTLTDRELEEYRREVERK 582
>sp|P35611|ADDA_HUMAN Alpha-adducin (Erythrocyte adducin alpha subunit)
Length = 737
Score = 40.0 bits (92), Expect = 0.009
Identities = 32/108 (29%), Positives = 53/108 (49%), Gaps = 1/108 (0%)
Frame = +2
Query: 197 NPKELLENQKRVKNKYYHDTNTAGPISCLLDSGLSREEAIKIKNESLKKHLGPTSVSPND 376
NPKE+ E + +++ + D TAGP S +L G+ + ++ ++ E
Sbjct: 495 NPKEVQEMRNKIREQNLQDIKTAGPQSQVL-CGVVMDRSL-VQGE--------------- 537
Query: 377 QVVTSASKGIIQKGHKAVVYQDLFKSSNPFDVTAD-ELAEYHKEIDRK 517
+ +ASK II+K ++ V NPF D EL EY +E++RK
Sbjct: 538 --LVTASKAIIEKEYQPHVIVST-TGPNPFTTLTDRELEEYRREVERK 582
>sp|P59583|WRK32_ARATH Probable WRKY transcription factor 32 (WRKY DNA-binding protein 32)
Length = 466
Score = 37.7 bits (86), Expect = 0.043
Identities = 38/139 (27%), Positives = 61/139 (43%), Gaps = 10/139 (7%)
Frame = +2
Query: 221 QKRVKN-----KYYHDTNT---AGPISCLLDSGLSREEAIKIKNESLKKHLGP--TSVSP 370
QK+VK+ YY T T A I C DSG ++I N+ L H P TS SP
Sbjct: 178 QKQVKSPKGSRSYYRCTYTECCAKKIECSNDSG----NVVEIVNKGLHTHEPPRKTSFSP 233
Query: 371 NDQVVTSASKGIIQKGHKAVVYQDLFKSSNPFDVTADELAEYHKEIDRKLHPDRYKSMEM 550
+ VT+A + + + + S+P T + + E +DRK H + E
Sbjct: 234 REIRVTTAIRPVSEDDTVVEELSIVPSGSDPSASTKEYICESQTLVDRKRHCENEAVEEP 293
Query: 551 ANDVQCKEENPEIKITLSQ 607
+ K++N + ++S+
Sbjct: 294 EPKRRLKKDNSQSSDSVSK 312
>sp|Q8EEU6|HSCB_SHEON Co-chaperone protein hscB homolog
Length = 174
Score = 37.0 bits (84), Expect = 0.074
Identities = 33/129 (25%), Positives = 60/129 (46%), Gaps = 4/129 (3%)
Frame = +2
Query: 434 YQDLFKSSNPFDVTADELAEYHKEIDRKLHPDRYKSMEMANDVQCKEENPEIKITLSQNE 613
Y +LFK FD+ LA+ ++E+ R +HPD++ AND + ++ ++ T N+
Sbjct: 3 YFELFKFPPTFDIDTAVLADRYRELQRAVHPDKF-----ANDTE-QQRLLSVQRTAQVND 56
Query: 614 --SSLPSPEIDKGDALLSRRDTDFPNQKEST--TEYVNKQNSSFECHPFFQSDFDEDFNN 781
+L P I + + +LS R D ++ + T ++ +Q E + D
Sbjct: 57 GYQTLKDP-IRRAEHMLSLRGIDLSHETTTVKDTAFLMQQMEWREALEDIRESIDHQAII 115
Query: 782 LQLTDSICA 808
+L DS A
Sbjct: 116 NELYDSFAA 124
>sp|P35612|ADDB_HUMAN Beta-adducin (Erythrocyte adducin beta subunit)
Length = 726
Score = 36.2 bits (82), Expect = 0.13
Identities = 38/155 (24%), Positives = 61/155 (39%), Gaps = 2/155 (1%)
Frame = +2
Query: 197 NPKELLENQKRVKNKYYHDTNTAGPISCLLDSGLSREEAIKIKNESLKKHLGPTSVSPND 376
+P+E+LE + +++ + D +AGP S LL S ++ + S SP
Sbjct: 491 DPQEVLEMRNKIREQNRQDVKSAGPQSQLLASVIAEK-----------------SRSP-- 531
Query: 377 QVVTSASKGIIQKGHKAVVYQDLFKSSNPF-DVTADELAEYHKEIDR-KLHPDRYKSMEM 550
S ++ KG + NPF +T EL EY KE++R KL D K
Sbjct: 532 ----STESQLMSKGDEDTKDDSEETVPNPFSQLTDQELEEYKKEVERKKLELDGEKETAP 587
Query: 551 ANDVQCKEENPEIKITLSQNESSLPSPEIDKGDAL 655
+ P + E+ SP + +L
Sbjct: 588 EEPGSPAKSAPASPVQSPAKEAETKSPLVSPSKSL 622
>sp|O43491|E41L2_HUMAN Band 4.1-like protein 2 (Generally expressed protein 4.1) (4.1G)
Length = 1005
Score = 35.8 bits (81), Expect = 0.16
Identities = 46/244 (18%), Positives = 97/244 (39%), Gaps = 21/244 (8%)
Frame = +2
Query: 137 IGHHSKSKSDNIK-DRNASTINPKELLENQKRVKNKYYHDTNTAGPISCLLDSGLSREEA 313
+G S+ K D+ + +A+ PKE+ ENQ+ + + + P + S L R++
Sbjct: 5 VGSVSEVKKDSSQLGTDATKEKPKEVAENQQNQSSDPEEEKGSQPPPAAESQSSLRRQKR 64
Query: 314 IKIKNES--LKKHLGPTSVSPNDQVVTSASKGIIQK-GHKAVVYQDLFKSSNPFDV---- 472
K +ES + + + P + A G +K +AVV + + P
Sbjct: 65 EKETSESRGISRFIPPWLKKQKSYTLVVAKDGGDKKEPTQAVVEEQVLDKEEPLPEEQRQ 124
Query: 473 ---TADELAEYHKEIDRKLHPDRYKSMEMANDVQCKEENPEIKITLSQNESSLPSPEIDK 643
A+E+A+ +EI ++ ++ + K E ++ + E + + DK
Sbjct: 125 AKGDAEEMAQKKQEIKVEVKEEKPSVSKEEKPSVSKVEMQPTELVSKEREEKVKETQEDK 184
Query: 644 GDALLSRRDTDFPN----QKESTTEYVNKQNSSFECH------PFFQSDFDEDFNNLQLT 793
+ ++R+T + E ++ V K+ + +C + D ++ L
Sbjct: 185 LEGGAAKRETKEVQTNELKAEKASQKVTKKTKTVQCKVTLLDGTEYSCDLEKHAKGQVLF 244
Query: 794 DSIC 805
D +C
Sbjct: 245 DKVC 248
>sp|Q9TTA5|SMAL1_BOVIN SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A-like protein 1 (Sucrose
nonfermenting protein 2-like 1) (DNA-dependent ATPase A)
(HepA-related protein)
Length = 941
Score = 35.8 bits (81), Expect = 0.16
Identities = 24/81 (29%), Positives = 44/81 (54%)
Frame = +2
Query: 644 GDALLSRRDTDFPNQKESTTEYVNKQNSSFECHPFFQSDFDEDFNNLQLTDSICASSPVK 823
G+A LS +T+F E+T +Y +K + + + FQ F+ED N+++L ++ + P
Sbjct: 850 GEAGLS--ETNFSEMTEAT-DYFSKDSKQQKIYNLFQKSFEEDGNDMELLEAAESFDPGS 906
Query: 824 LNSDDKIKTVDKLDLAGDNSK 886
++ DK+ D+ L G K
Sbjct: 907 QDTGDKL---DESTLTGSPVK 924
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 96,876,546
Number of Sequences: 369166
Number of extensions: 1927683
Number of successful extensions: 6641
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6608
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8934348180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)