Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_J20
(821 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 462 e-130
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 462 e-130
sp|P53458|ACT5_DIPDE Actin-5 461 e-129
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 461 e-129
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 461 e-129
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 461 e-129
sp|P92176|ACT2_LUMTE Actin-2 460 e-129
sp|P12716|ACTC_PISOC Actin, cytoplasmic 460 e-129
sp|P53470|ACT1_SCHMA Actin-1 460 e-129
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 460 e-129
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 462 bits (1188), Expect = e-130
Identities = 226/241 (93%), Positives = 236/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 256 FRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKC
Sbjct: 316 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 462 bits (1188), Expect = e-130
Identities = 226/241 (93%), Positives = 237/241 (98%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 256 FRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKC
Sbjct: 316 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
>sp|P53458|ACT5_DIPDE Actin-5
Length = 371
Score = 461 bits (1186), Expect = e-129
Identities = 228/241 (94%), Positives = 235/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 131 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 190
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM A++SS+LEKSYELPDGQVITIGNER
Sbjct: 191 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMSNAASSSALEKSYELPDGQVITIGNER 250
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMYPGI+DRMQ
Sbjct: 251 FRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMYPGISDRMQ 310
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEISALAP TMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC
Sbjct: 311 KEISALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 370
Query: 722 F 724
F
Sbjct: 371 F 371
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 461 bits (1186), Expect = e-129
Identities = 225/241 (93%), Positives = 236/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 256 FRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKC
Sbjct: 316 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 461 bits (1186), Expect = e-129
Identities = 226/241 (93%), Positives = 235/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA+ SSSLEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 256 FRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKC
Sbjct: 316 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 461 bits (1186), Expect = e-129
Identities = 225/241 (93%), Positives = 236/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 256 FRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKC
Sbjct: 316 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
>sp|P92176|ACT2_LUMTE Actin-2
Length = 376
Score = 460 bits (1184), Expect = e-129
Identities = 227/241 (94%), Positives = 235/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TASASSSLEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMNTASASSSLEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEA+F SFLG+ESVGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TM+PGIADRMQ
Sbjct: 256 FRCPEAMFHASFLGMESVGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMFPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKC
Sbjct: 316 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 460 bits (1184), Expect = e-129
Identities = 225/241 (93%), Positives = 236/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIV DSGDGV+HTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA++SSSLEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 256 FRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KE++ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKC
Sbjct: 316 KEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
>sp|P53470|ACT1_SCHMA Actin-1
Length = 376
Score = 460 bits (1183), Expect = e-129
Identities = 227/241 (94%), Positives = 236/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDY+MKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYMMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM TA++SS+LEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSALEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLY+N VLSGGSTMYPGIADRMQ
Sbjct: 256 FRCPEALFQPSFLGMEASGIHETTYNSIMKCDVDIRKDLYSNTVLSGGSTMYPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEISALAP TMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC
Sbjct: 316 KEISALAPSTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 460 bits (1183), Expect = e-129
Identities = 225/241 (93%), Positives = 235/241 (97%)
Frame = +2
Query: 2 AIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLTDYLMKILT 181
AIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLAGRDLTDYLMKILT
Sbjct: 136 AIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLTDYLMKILT 195
Query: 182 ERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTASASSSLEKSYELPDGQVITIGNER 361
ERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS SSSLEKSYELPDGQVITIGNER
Sbjct: 196 ERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQVITIGNER 255
Query: 362 FRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMYPGIADRMQ 541
FRCPEA FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSGGSTM+PGIADRMQ
Sbjct: 256 FRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMFPGIADRMQ 315
Query: 542 KEISALAPPTMKIKIVAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKC 721
KEI+ALAPPTMKIKI+APPERKYSVWIGGSILASLSTFQQMWISKQEYDESGP IVHRKC
Sbjct: 316 KEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPSIVHRKC 375
Query: 722 F 724
F
Sbjct: 376 F 376
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,164,880
Number of Sequences: 369166
Number of extensions: 1956402
Number of successful extensions: 5822
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5670
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7907893860
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)