Planarian EST Database


Dr_sW_019_J19

BLASTX 2.2.12 [Aug-07-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dr_sW_019_J19
         (865 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P07688|CATB_BOVIN  Cathepsin B precursor [Contains: Cathe...   400   e-111
sp|P07858|CATB_HUMAN  Cathepsin B precursor (Cathepsin B1) (...   394   e-109
sp|P00787|CATB_RAT  Cathepsin B precursor (Cathepsin B1) (RS...   387   e-107
sp|P10605|CATB_MOUSE  Cathepsin B precursor (Cathepsin B1) [...   387   e-107
sp|P43233|CATB_CHICK  Cathepsin B precursor (Cathepsin B1) [...   375   e-104
sp|P43157|CYSP_SCHJA  Cathepsin B-like cysteine proteinase p...   348   1e-95
sp|P25792|CYSP_SCHMA  Cathepsin B-like cysteine proteinase p...   339   7e-93
sp|P43510|CPR6_CAEEL  Cathepsin B-like cysteine proteinase 6...   317   3e-86
sp|P43509|CPR5_CAEEL  Cathepsin B-like cysteine proteinase 5...   313   3e-85
sp|P25807|CPR1_CAEEL  Gut-specific cysteine proteinase precu...   308   1e-83
>sp|P07688|CATB_BOVIN Cathepsin B precursor [Contains: Cathepsin B light chain; Cathepsin
           B heavy chain]
          Length = 335

 Score =  400 bits (1029), Expect = e-111
 Identities = 178/264 (67%), Positives = 205/264 (77%)
 Frame = +1

Query: 16  KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 195
           KLP+R      V LP +FDAR QWP C +I EIRDQ +CGSCWAFGAVEAI+DR CIHSN
Sbjct: 67  KLPQRDAFAADVVLPESFDAREQWPNCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHSN 126

Query: 196 GTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPK 375
           G     +SAED+LTCCG  CGDGCNGGFPSGAW++W   GLV+GG Y +H+GC+ Y+ P 
Sbjct: 127 GRVNVEVSAEDMLTCCGGECGDGCNGGFPSGAWNFWTKKGLVSGGLYNSHVGCRPYSIPP 186

Query: 376 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 555
           C HHV G  P CTGE  TPKC K C+ GYS +Y EDK +G SSYSV +N++ IM EI  N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPKCNKTCEPGYSPSYKEDKHFGCSSYSVANNEKEIMAEIYKN 246

Query: 556 GPVEAAFSVYADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGD 735
           GPVE AFSVY+DF  YKSGVYQHVSG ++GGHAI+ILGWGVEN TPYWLV NSWN  WGD
Sbjct: 247 GPVEGAFSVYSDFLLYKSGVYQHVSGEIMGGHAIRILGWGVENGTPYWLVGNSWNTDWGD 306

Query: 736 NGYFKILRGSDECGIEDEVVAGIP 807
           NG+FKILRG D CGIE E+VAG+P
Sbjct: 307 NGFFKILRGQDHCGIESEIVAGMP 330
>sp|P07858|CATB_HUMAN Cathepsin B precursor (Cathepsin B1) (APP secretase) (APPS)
           [Contains: Cathepsin B light chain; Cathepsin B heavy
           chain]
          Length = 339

 Score =  394 bits (1012), Expect = e-109
 Identities = 174/265 (65%), Positives = 207/265 (78%)
 Frame = +1

Query: 16  KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 195
           K P+R      ++LP +FDAR QWP+C +I EIRDQ +CGSCWAFGAVEAI+DR CIH+N
Sbjct: 67  KPPQRVMFTEDLKLPASFDAREQWPQCPTIKEIRDQGSCGSCWAFGAVEAISDRICIHTN 126

Query: 196 GTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPK 375
              +  +SAEDLLTCCG  CGDGCNGG+P+ AW++W   GLV+GG Y +H+GC+ Y+ P 
Sbjct: 127 AHVSVEVSAEDLLTCCGSMCGDGCNGGYPAEAWNFWTRKGLVSGGLYESHVGCRPYSIPP 186

Query: 376 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 555
           C HHV G  P CTGE  TPKC K C+ GYS TY +DK YG +SYSV ++++ IM EI  N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPKCSKICEPGYSPTYKQDKHYGYNSYSVSNSEKDIMAEIYKN 246

Query: 556 GPVEAAFSVYADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGD 735
           GPVE AFSVY+DF  YKSGVYQHV+G M+GGHAI+ILGWGVEN TPYWLVANSWN  WGD
Sbjct: 247 GPVEGAFSVYSDFLLYKSGVYQHVTGEMMGGHAIRILGWGVENGTPYWLVANSWNTDWGD 306

Query: 736 NGYFKILRGSDECGIEDEVVAGIPK 810
           NG+FKILRG D CGIE EVVAGIP+
Sbjct: 307 NGFFKILRGQDHCGIESEVVAGIPR 331
>sp|P00787|CATB_RAT Cathepsin B precursor (Cathepsin B1) (RSG-2) [Contains: Cathepsin B
           light chain; Cathepsin B heavy chain]
          Length = 339

 Score =  387 bits (994), Expect = e-107
 Identities = 166/264 (62%), Positives = 203/264 (76%)
 Frame = +1

Query: 19  LPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNG 198
           LP+R      + LP +FDAR QW  C +I +IRDQ +CGSCWAFGAVEA++DR CIH+NG
Sbjct: 68  LPERVGFSEDINLPESFDAREQWSNCPTIAQIRDQGSCGSCWAFGAVEAMSDRICIHTNG 127

Query: 199 TQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKC 378
                +SAEDLLTCCG +CGDGCNGG+PSGAW++W   GLV+GG Y +H+GC  Y  P C
Sbjct: 128 RVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWNFWTRKGLVSGGVYNSHIGCLPYTIPPC 187

Query: 379 SHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNG 558
            HHV G  P CTGE  TPKC K C+AGYS +Y EDK YG +SYSV  +++ IM EI  NG
Sbjct: 188 EHHVNGSRPPCTGEGDTPKCNKMCEAGYSTSYKEDKHYGYTSYSVSDSEKEIMAEIYKNG 247

Query: 559 PVEAAFSVYADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGDN 738
           PVE AF+V++DF +YKSGVY+H +G ++GGHAI+ILGWG+EN  PYWLVANSWN  WGDN
Sbjct: 248 PVEGAFTVFSDFLTYKSGVYKHEAGDVMGGHAIRILGWGIENGVPYWLVANSWNVDWGDN 307

Query: 739 GYFKILRGSDECGIEDEVVAGIPK 810
           G+FKILRG + CGIE E+VAGIP+
Sbjct: 308 GFFKILRGENHCGIESEIVAGIPR 331
>sp|P10605|CATB_MOUSE Cathepsin B precursor (Cathepsin B1) [Contains: Cathepsin B light
           chain; Cathepsin B heavy chain]
          Length = 339

 Score =  387 bits (994), Expect = e-107
 Identities = 169/265 (63%), Positives = 203/265 (76%)
 Frame = +1

Query: 16  KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 195
           KLP R      + LP TFDAR QW  C +IG+IRDQ +CGSCWAFGAVEAI+DR CIH+N
Sbjct: 67  KLPGRVAFGEDIDLPETFDAREQWSNCPTIGQIRDQGSCGSCWAFGAVEAISDRTCIHTN 126

Query: 196 GTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPK 375
           G     +SAEDLLTCCG +CGDGCNGG+PSGAW +W   GLV+GG Y +H+GC  Y  P 
Sbjct: 127 GRVNVEVSAEDLLTCCGIQCGDGCNGGYPSGAWSFWTKKGLVSGGVYNSHVGCLPYTIPP 186

Query: 376 CSHHVIGPYPNCTGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTN 555
           C HHV G  P CTGE  TP+C K+C+AGYS +Y EDK +G +SYSV ++ + IM EI  N
Sbjct: 187 CEHHVNGSRPPCTGEGDTPRCNKSCEAGYSPSYKEDKHFGYTSYSVSNSVKEIMAEIYKN 246

Query: 556 GPVEAAFSVYADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGD 735
           GPVE AF+V++DF +YKSGVY+H +G M+GGHAI+ILGWGVEN  PYWL ANSWN  WGD
Sbjct: 247 GPVEGAFTVFSDFLTYKSGVYKHEAGDMMGGHAIRILGWGVENGVPYWLAANSWNLDWGD 306

Query: 736 NGYFKILRGSDECGIEDEVVAGIPK 810
           NG+FKILRG + CGIE E+VAGIP+
Sbjct: 307 NGFFKILRGENHCGIESEIVAGIPR 331
>sp|P43233|CATB_CHICK Cathepsin B precursor (Cathepsin B1) [Contains: Cathepsin B light
           chain; Cathepsin B heavy chain]
          Length = 340

 Score =  375 bits (963), Expect = e-104
 Identities = 166/267 (62%), Positives = 196/267 (73%), Gaps = 1/267 (0%)
 Frame = +1

Query: 16  KLPKRKPLLNRVRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSN 195
           K P+R      + LP TFD R QWP C +I EIRDQ +CGSCWAFGAVEAI+DR C+H+N
Sbjct: 67  KAPERVDFAEDMDLPDTFDTRKQWPNCPTISEIRDQGSCGSCWAFGAVEAISDRICVHTN 126

Query: 196 GTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPK 375
              +  +SAEDLL+CCGF CG GCNGG+PSGAW YW   GLV+GG Y +H+GC+ Y  P 
Sbjct: 127 AKVSVEVSAEDLLSCCGFECGMGCNGGYPSGAWRYWTERGLVSGGLYDSHVGCRAYTIPP 186

Query: 376 CSHHVIGPYPNCTGE-FPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILT 552
           C HHV G  P CTGE   TP+C + C+ GYS +Y EDK YG +SY V  +++ IM EI  
Sbjct: 187 CEHHVNGSRPPCTGEGGETPRCSRHCEPGYSPSYKEDKHYGITSYGVPRSEKEIMAEIYK 246

Query: 553 NGPVEAAFSVYADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWG 732
           NGPVE AF VY DF  YKSGVYQHVSG  +GGHAI+ILGWGVEN TPYWL ANSWN  WG
Sbjct: 247 NGPVEGAFIVYEDFLMYKSGVYQHVSGEQVGGHAIRILGWGVENGTPYWLAANSWNTDWG 306

Query: 733 DNGYFKILRGSDECGIEDEVVAGIPKL 813
             G+FKILRG D CGIE E+VAG+P++
Sbjct: 307 ITGFFKILRGEDHCGIESEIVAGVPRM 333
>sp|P43157|CYSP_SCHJA Cathepsin B-like cysteine proteinase precursor (Antigen Sj31)
          Length = 342

 Score =  348 bits (893), Expect = 1e-95
 Identities = 152/255 (59%), Positives = 189/255 (74%), Gaps = 1/255 (0%)
 Frame = +1

Query: 49  VRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAED 228
           V +P+ FD+R +WP CKSI +IRDQS CGSCWAFGAVEA+TDR CI S G Q+  +SA D
Sbjct: 88  VEIPSQFDSRKKWPHCKSISQIRDQSRCGSCWAFGAVEAMTDRICIQSGGGQSAELSALD 147

Query: 229 LLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKCSHHVIGPYPN 408
           L++CC   CGDGC GGFP  AW YWV  G+VTGG    H GCQ Y FPKC HH  G YP 
Sbjct: 148 LISCCK-DCGDGCQGGFPGVAWDYWVKRGIVTGGSKENHTGCQPYPFPKCEHHTKGKYPA 206

Query: 409 C-TGEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAFSVY 585
           C T  + TP+CK+ CQ GY   Y +DK YG  SY+V +N++ I ++I+  GPVEAAF VY
Sbjct: 207 CGTKIYKTPQCKQTCQKGYKTPYEQDKHYGDESYNVQNNEKVIQRDIMMYGPVEAAFDVY 266

Query: 586 ADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGS 765
            DF +YKSG+Y+HV+G ++GGHAI+I+GWGVE  TPYWL+ANSWN  WG+ G F+++RG 
Sbjct: 267 EDFLNYKSGIYRHVTGSIVGGHAIRIIGWGVEKRTPYWLIANSWNEDWGEKGLFRMVRGR 326

Query: 766 DECGIEDEVVAGIPK 810
           DEC IE +VVAG+ K
Sbjct: 327 DECSIESDVVAGLIK 341
>sp|P25792|CYSP_SCHMA Cathepsin B-like cysteine proteinase precursor (Antigen Sm31)
          Length = 340

 Score =  339 bits (869), Expect = 7e-93
 Identities = 151/264 (57%), Positives = 191/264 (72%), Gaps = 5/264 (1%)
 Frame = +1

Query: 25  KRKPLLNR----VRLPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHS 192
           KR+P ++     V +P+ FD+R +WP CKSI  IRDQS CGSCW+FGAVEA++DR CI S
Sbjct: 75  KRRPTVDHNDWNVEIPSNFDSRKKWPGCKSIATIRDQSRCGSCWSFGAVEAMSDRSCIQS 134

Query: 193 NGTQTPRISAEDLLTCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFP 372
            G Q   +SA DLLTCC   CG GC GG    AW YWV +G+VT      H GC+ Y FP
Sbjct: 135 GGKQNVELSAVDLLTCCE-SCGLGCEGGILGPAWDYWVKEGIVTASSKENHTGCEPYPFP 193

Query: 373 KCSHHVIGPYPNCTGE-FPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEIL 549
           KC HH  G YP C  + + TP+CK+ CQ  Y   Y +DK  GKSSY+V ++++AI +EI+
Sbjct: 194 KCEHHTKGKYPPCGSKIYNTPRCKQTCQRKYKTPYTQDKHRGKSSYNVKNDEKAIQKEIM 253

Query: 550 TNGPVEAAFSVYADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTW 729
             GPVEA+F+VY DF +YKSG+Y+H++G  LGGHAI+I+GWGVEN TPYWL+ANSWN  W
Sbjct: 254 KYGPVEASFTVYEDFLNYKSGIYKHITGEALGGHAIRIIGWGVENKTPYWLIANSWNEDW 313

Query: 730 GDNGYFKILRGSDECGIEDEVVAG 801
           G+NGYF+I+RG DEC IE EV+AG
Sbjct: 314 GENGYFRIVRGRDECSIESEVIAG 337
>sp|P43510|CPR6_CAEEL Cathepsin B-like cysteine proteinase 6 precursor (Cysteine
           protease-related 6)
          Length = 379

 Score =  317 bits (812), Expect = 3e-86
 Identities = 145/258 (56%), Positives = 185/258 (71%), Gaps = 5/258 (1%)
 Frame = +1

Query: 55  LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 234
           +P +FD+R  WPKC SI  IRDQS+CGSCWAFGAVEA++DR CI S+G     +SA+DLL
Sbjct: 105 IPESFDSRDNWPKCDSIKVIRDQSSCGSCWAFGAVEAMSDRICIASHGELQVTLSADDLL 164

Query: 235 TCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKCSHHV----IGPY 402
           +CC   CG GCNGG P  AW YWV DG+VTG  Y A+ GC+ Y FP C HH       P 
Sbjct: 165 SCCK-SCGFGCNGGDPLAAWRYWVKDGIVTGSNYTANNGCKPYPFPPCEHHSKKTHFDPC 223

Query: 403 PNCTGEFPTPKCKKACQAGYS-KTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAFS 579
           P+    +PTPKC+K C + Y+ KTY+EDK +G S+Y V  + +AI +E++T+GP+E AF 
Sbjct: 224 PHDL--YPTPKCEKKCVSDYTDKTYSEDKFFGASAYGVKDDVEAIQKELMTHGPLEIAFE 281

Query: 580 VYADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGDNGYFKILR 759
           VY DF +Y  GVY H  G + GGHA+K++GWG+++  PYW VANSWN  WG++G+F+ILR
Sbjct: 282 VYEDFLNYDGGVYVHTGGKLGGGHAVKLIGWGIDDGIPYWTVANSWNTDWGEDGFFRILR 341

Query: 760 GSDECGIEDEVVAGIPKL 813
           G DECGIE  VV GIPKL
Sbjct: 342 GVDECGIESGVVGGIPKL 359
>sp|P43509|CPR5_CAEEL Cathepsin B-like cysteine proteinase 5 precursor (Cysteine
           protease-related 5)
          Length = 344

 Score =  313 bits (803), Expect = 3e-85
 Identities = 145/259 (55%), Positives = 177/259 (68%), Gaps = 6/259 (2%)
 Frame = +1

Query: 55  LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 234
           +P  FDAR QWP C SI  IRDQS+CGSCWAF A EAI+DR CI SNG     +S+EDLL
Sbjct: 82  IPDHFDARDQWPNCMSINNIRDQSDCGSCWAFAAAEAISDRTCIASNGAVNTLLSSEDLL 141

Query: 235 TCCG--FRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKCSHHVIG-PYP 405
           +CC   F CG+GC GG+P  AW +WV  GLVTGG Y    GC+ Y+   C   V G  +P
Sbjct: 142 SCCTGMFSCGNGCEGGYPIQAWKWWVKHGLVTGGSYETQFGCKPYSIAPCGETVNGVKWP 201

Query: 406 NCTGEF-PTPKCKKACQA--GYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAF 576
            C  +  PTPKC  +C +   Y+  Y +DK +G ++Y+V    + I  EILTNGP+E AF
Sbjct: 202 ACPEDTEPTPKCVDSCTSKNNYATPYLQDKHFGSTAYAVGKKVEQIQTEILTNGPIEVAF 261

Query: 577 SVYADFPSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGDNGYFKIL 756
           +VY DF  Y +GVY H +G  LGGHA+KILGWGV+N TPYWLVANSWN  WG+ GYF+I+
Sbjct: 262 TVYEDFYQYTTGVYVHTAGASLGGHAVKILGWGVDNGTPYWLVANSWNVAWGEKGYFRII 321

Query: 757 RGSDECGIEDEVVAGIPKL 813
           RG +ECGIE   VAGIP L
Sbjct: 322 RGLNECGIEHSAVAGIPDL 340
>sp|P25807|CPR1_CAEEL Gut-specific cysteine proteinase precursor
          Length = 329

 Score =  308 bits (790), Expect = 1e-83
 Identities = 143/253 (56%), Positives = 176/253 (69%)
 Frame = +1

Query: 55  LPTTFDARVQWPKCKSIGEIRDQSNCGSCWAFGAVEAITDRYCIHSNGTQTPRISAEDLL 234
           +P TFD+R QW +CKSI  IRDQ+ CGSCWAFGA E I+DR CI + G Q P IS +DLL
Sbjct: 85  VPATFDSRTQWSECKSIKLIRDQATCGSCWAFGAAEMISDRTCIETKGAQQPIISPDDLL 144

Query: 235 TCCGFRCGDGCNGGFPSGAWHYWVTDGLVTGGEYGAHLGCQDYAFPKCSHHVIGPYPNCT 414
           +CCG  CG+GC GG+P  A  +W + G+VTGG+Y    GC+ Y    C+        NC 
Sbjct: 145 SCCGSSCGNGCEGGYPIQALRWWDSKGVVTGGDYHG-AGCKPYPIAPCTSG------NCP 197

Query: 415 GEFPTPKCKKACQAGYSKTYAEDKQYGKSSYSVDSNQQAIMQEILTNGPVEAAFSVYADF 594
            E  TP C  +CQ+GYS  YA+DK +G S+Y+V  N  +I  EI  NGPVEAAFSVY DF
Sbjct: 198 -ESKTPSCSMSCQSGYSTAYAKDKHFGVSAYAVPKNAASIQAEIYANGPVEAAFSVYEDF 256

Query: 595 PSYKSGVYQHVSGGMLGGHAIKILGWGVENNTPYWLVANSWNPTWGDNGYFKILRGSDEC 774
             YKSGVY+H +G  LGGHAIKI+GWG E+ +PYWLVANSW   WG++G+FKI RG D+C
Sbjct: 257 YKYKSGVYKHTAGKYLGGHAIKIIGWGTESGSPYWLVANSWGVNWGESGFFKIYRGDDQC 316

Query: 775 GIEDEVVAGIPKL 813
           GIE  VVAG  K+
Sbjct: 317 GIESAVVAGKAKV 329
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 107,167,914
Number of Sequences: 369166
Number of extensions: 2492877
Number of successful extensions: 7638
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6866
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7396
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8582957970
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)