Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_I22
(502 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P31226|SAX_RANCA Saxiphilin precursor (SAX) 64 2e-10
sp|P81439|EQST_ACTEQ Equistatin 62 6e-10
sp|P01267|THYG_BOVIN Thyroglobulin precursor 61 2e-09
sp|P06882|THYG_RAT Thyroglobulin precursor 60 4e-09
sp|O08710|THYG_MOUSE Thyroglobulin precursor 59 5e-09
sp|P01266|THYG_HUMAN Thyroglobulin precursor 59 5e-09
sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2) 52 8e-07
sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonido... 52 1e-06
sp|Q62288|TICN1_MOUSE Testican-1 precursor (SPOCK protein) 48 1e-05
sp|Q8BKV0|TICN3_MOUSE Testican-3 precursor (SPARC/osteonect... 48 1e-05
>sp|P31226|SAX_RANCA Saxiphilin precursor (SAX)
Length = 844
Score = 63.9 bits (154), Expect = 2e-10
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 14/134 (10%)
Frame = +1
Query: 16 SANPKNTPCLEKYSKSRSGGLLGAQIPKCDSNGDFSPVQCIGS--QCYCVDRDGKNIENY 189
S+N CL++ ++ + ++G IP+CD G++ P QC GS C+CV+ G+ I
Sbjct: 102 SSNRDLQKCLKERQQALAKKMIGHYIPQCDEKGNYQPQQCHGSTGHCWCVNAMGEKISGT 161
Query: 190 GAPIGES-INC------KCARDQDDY--RKTKLLGKMF-RCTESGNYDSVQCIGSV--CF 333
P G++ C KC +++ K+LG+ +C E GNY+ Q GS +
Sbjct: 162 NTPPGQTRATCERHELPKCLKERQVALGGDEKVLGRFVPQCDEKGNYEPQQFHGSTGYSW 221
Query: 334 CANEHGQAIEGKQT 375
C N G+ I G +T
Sbjct: 222 CVNAIGEEIAGTKT 235
>sp|P81439|EQST_ACTEQ Equistatin
Length = 199
Score = 62.4 bits (150), Expect = 6e-10
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 14/121 (11%)
Frame = +1
Query: 46 EKYSKSRSGGLLGAQIPKCDSNGDFSPVQCIGS--QCYCVDRDGKNIENYGAPIGESINC 219
++ S + GL+GA +P+C G+F QC GS C+CVD DGK I G I S +
Sbjct: 6 QQLQASANSGLIGAYVPQCKETGEFEEKQCWGSTGYCWCVDEDGKEI--LGTKIRGSPD- 62
Query: 220 KCARDQDDYRKTKLLGKMF----------RCTESGNYDSVQCIGS--VCFCANEHGQAIE 363
C+R + +++ + C G++D VQC S C+C ++ G+ +E
Sbjct: 63 -CSRRKAALTLCQMMQAIIVNVPGWCGPPSCKADGSFDEVQCCASNGECYCVDKKGKELE 121
Query: 364 G 366
G
Sbjct: 122 G 122
Score = 58.9 bits (141), Expect = 6e-09
Identities = 36/100 (36%), Positives = 48/100 (48%), Gaps = 9/100 (9%)
Frame = +1
Query: 94 PKCDSNGDFSPVQCIGS--QCYCVDRDGKNIENY---GAPIGESINCKCARDQDDYRKTK 258
P C ++G F VQC S +CYCVD+ GK +E G P E C +
Sbjct: 90 PSCKADGSFDEVQCCASNGECYCVDKKGKELEGTRQKGRPSCERHLSPCEEARLQAHSNS 149
Query: 259 LLGKMF--RCTESGNYDSVQCIGSV--CFCANEHGQAIEG 366
L MF +C E G+Y+ VQC S C+C +E G + G
Sbjct: 150 LRVGMFVPQCLEDGSYNPVQCWPSTGYCWCVDEGGVKVPG 189
Score = 38.5 bits (88), Expect = 0.009
Identities = 19/52 (36%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Frame = +1
Query: 34 TPCLEKYSKSRSGGL-LGAQIPKCDSNGDFSPVQCIGS--QCYCVDRDGKNI 180
+PC E ++ S L +G +P+C +G ++PVQC S C+CVD G +
Sbjct: 136 SPCEEARLQAHSNSLRVGMFVPQCLEDGSYNPVQCWPSTGYCWCVDEGGVKV 187
>sp|P01267|THYG_BOVIN Thyroglobulin precursor
Length = 2769
Score = 60.8 bits (146), Expect = 2e-09
Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQCYCVDRDGKNIENYGAPIGESINCKCARDQDDYRKTKLLGK 270
+P C + G + VQC C+CVD G+ + G C ++ R LLG
Sbjct: 616 VPACTAEGSYEEVQCFAGDCWCVDAQGRELAGSRVRGGRP-RCPTECEKQRARMQSLLGS 674
Query: 271 --------MFRCTESGNYDSVQCIGSVCFCANEHGQAIEGKQT 375
+ CT GN+ VQC S C+C + GQ I G ++
Sbjct: 675 QPAGSSLFVPACTSKGNFLPVQCFNSECYCVDTEGQPIPGTRS 717
Score = 54.7 bits (130), Expect = 1e-07
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 23/129 (17%)
Frame = +1
Query: 4 SNICSANPKNTPCLEKYSKSRSGGLLGAQ-------IPKCDSNGDFSPVQCIGSQCYCVD 162
S + P+ EK ++R LLG+Q +P C S G+F PVQC S+CYCVD
Sbjct: 648 SRVRGGRPRCPTECEK-QRARMQSLLGSQPAGSSLFVPACTSKGNFLPVQCFNSECYCVD 706
Query: 163 RDGKNIENYGAPIGESINCKCARDQDDYR--------------KTKLLGKMF--RCTESG 294
+G+ I + +GE C R L ++ +C+ SG
Sbjct: 707 TEGQPIPGTRSALGEPKKCPSPCQLQAERAFLGTVRTLVSNPSTLPALSSIYIPQCSASG 766
Query: 295 NYDSVQCIG 321
+ VQC G
Sbjct: 767 QWSPVQCDG 775
Score = 52.0 bits (123), Expect = 8e-07
Identities = 30/102 (29%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQC--IGSQCYCVDRDGKNI---ENYGAPIGESINCKCARDQ---DDY 246
+P+C +G F VQC G+ C+CVD DG+ + G P C+ + Q Y
Sbjct: 49 VPQCAEDGSFQTVQCGKDGASCWCVDADGREVPGSRQPGRPAACLSFCQLQKQQILLSSY 108
Query: 247 RKTKLLGKMFRCTESGNYDSVQC--IGSVCFCANEHGQAIEG 366
+ + +C +SG+Y VQC C+C + G + G
Sbjct: 109 INSTATSYLPQCQDSGDYSPVQCDLRRRQCWCVDAEGMEVYG 150
Score = 42.7 bits (99), Expect = 5e-04
Identities = 28/81 (34%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQC--IGSQCYCVDRDGKNIENYGAPIGESINCKCARDQDDYRKTKLL 264
+P+C +GD+SPVQC QC+CVD +G +E YG + +C R + + L
Sbjct: 117 LPQCQDSGDYSPVQCDLRRRQCWCVDAEG--MEVYGTR-QQGRPARCPRSCEIRNRRLLH 173
Query: 265 GKMFR----CTESGNYDSVQC 315
G R C+ G + VQC
Sbjct: 174 GVGDRSPPQCSPDGAFRPVQC 194
Score = 34.3 bits (77), Expect = 0.17
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
Frame = +1
Query: 85 AQIPKCDSNGDFSPVQCIGS--QCYCVDRDGKNI 180
A +P+CD+ G + PVQC + C+CVD G+ +
Sbjct: 1026 AYLPQCDAFGGWEPVQCHAATGHCWCVDGKGEYV 1059
Score = 31.6 bits (70), Expect = 1.1
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQC-IGSQCYCVDRDGKNI 180
+P C +G++ QC G C+CVD G+ I
Sbjct: 316 VPSCHPDGEYQAAQCQQGGPCWCVDSRGQEI 346
Score = 28.5 bits (62), Expect = 9.3
Identities = 24/100 (24%), Positives = 38/100 (38%), Gaps = 8/100 (8%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQCYCVDRDGKNIENYGAPIGESINCKC------ARDQDDYRK 252
IP C G+F+ +Q + +CVD G P G + + +C + R+
Sbjct: 1105 IPTCLETGEFARLQASEAGTWCVD----PASGEGVPPGTNSSAQCPSLCEVLQSGVPSRR 1160
Query: 253 TKLLGKMFRCTESGNYDSVQC--IGSVCFCANEHGQAIEG 366
T E G + VQC C+C G+ + G
Sbjct: 1161 TSPGYSPACRAEDGGFSPVQCDPAQGSCWCVLGSGEEVPG 1200
>sp|P06882|THYG_RAT Thyroglobulin precursor
Length = 2768
Score = 59.7 bits (143), Expect = 4e-09
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 7/102 (6%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQCYCVDRDGKNIENYGAPIGE---SINCKCARDQ-DDYRKTK 258
+P C + G + +QC +C+CV+ GK +E G C+ R Q + +
Sbjct: 617 VPSCTAEGSYEDIQCYAGECWCVNSQGKEVEGSRVSGGHPRCPTKCEKQRAQMQNLAGAQ 676
Query: 259 LLGKMF---RCTESGNYDSVQCIGSVCFCANEHGQAIEGKQT 375
G F CT G + VQC S C+C + GQ I G Q+
Sbjct: 677 PAGSSFFVPTCTSEGYFLPVQCFNSECYCVDAEGQVIPGTQS 718
Score = 53.9 bits (128), Expect = 2e-07
Identities = 44/154 (28%), Positives = 65/154 (42%), Gaps = 23/154 (14%)
Frame = +1
Query: 4 SNICSANPKNTPCLEKYSKSRSGGLLGAQ-------IPKCDSNGDFSPVQCIGSQCYCVD 162
S + +P+ EK +++ L GAQ +P C S G F PVQC S+CYCVD
Sbjct: 649 SRVSGGHPRCPTKCEK-QRAQMQNLAGAQPAGSSFFVPTCTSEGYFLPVQCFNSECYCVD 707
Query: 163 RDGKNIENYGAPIGESINC-KCARDQDDYRKTKLLGKMF---------------RCTESG 294
+G+ I + IGE C + Q + ++G + +C+ SG
Sbjct: 708 AEGQVIPGTQSTIGEPKLCPSVCQLQAEQAFLGVVGVLLSNSSMVPPISSVYIPQCSTSG 767
Query: 295 NYDSVQCIGSVCFCANEHGQAIEGKQTVSIGNSD 396
+ VQC G H Q E + + NSD
Sbjct: 768 QWMPVQCDG-------PHEQVFEWYERWNTQNSD 794
Score = 48.9 bits (115), Expect = 7e-06
Identities = 31/102 (30%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQC--IGSQCYCVDRDGKNI---ENYGAPIGESINCKCARDQ---DDY 246
+P+C +G F VQC G C+CVD DG + G P C+ + + Y
Sbjct: 50 VPQCSEDGSFQTVQCQNDGQSCWCVDSDGTEVPGSRQLGRPTACLSFCQLHKQRILLSSY 109
Query: 247 RKTKLLGKMFRCTESGNYDSVQC-IGSV-CFCANEHGQAIEG 366
+ + +C +SGNY VQC + V C+C + G + G
Sbjct: 110 INSTDALYLPQCQDSGNYAPVQCDLQQVQCWCVDTEGMEVYG 151
Score = 37.4 bits (85), Expect = 0.020
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQC--IGSQCYCVDRDGKNIENYGAPIGESINCKCARDQDDYRKTKLL 264
+P+C +G+++PVQC QC+CVD +G +E YG + +C R + + L
Sbjct: 118 LPQCQDSGNYAPVQCDLQQVQCWCVDTEG--MEVYGTR-QQGRPTRCPRSCEIRSRRLLH 174
Query: 265 G----KMFRCTESGNYDSVQC 315
G +C G + VQC
Sbjct: 175 GVGDKSPPQCDADGEFMPVQC 195
Score = 33.9 bits (76), Expect = 0.22
Identities = 28/106 (26%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Frame = +1
Query: 82 GAQIPKCDSNGDFSPVQCI--GSQCYCVDRDGKNIENYGAPIGES-------INCKCAR- 231
G +P+C++ G + PVQC QC+CVD G+ I G+ + S +C+ +R
Sbjct: 1026 GPYMPQCNTIGGWEPVQCHPGTGQCWCVDGWGELIP--GSLMARSSQMPQCPTSCELSRA 1083
Query: 232 -------DQDDYRKTKLLGKMFR--CTESGNYDSVQCIGSVCFCAN 342
Q +++ G +F C ++G Y Q G+ +C +
Sbjct: 1084 NGLISAWKQAGHQRNPGPGDLFTPVCLQTGEYVRQQTSGTGAWCVD 1129
Score = 32.0 bits (71), Expect = 0.84
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 4/53 (7%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQC-IGSQCYCVDRDGKNI---ENYGAPIGESINCKCARDQ 237
IP C +G + VQC + C+CVD G I G P+ CA+DQ
Sbjct: 317 IPSCHRDGHYQTVQCQMERMCWCVDAQGIEIPGTRQQGQPL------FCAKDQ 363
Score = 28.5 bits (62), Expect = 9.3
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +1
Query: 61 SRSGGLLGAQIPKCDS-NGDFSPVQCIGSQ--CYCVDRDGKNI 180
SR GL P C++ +G FSPVQC +Q C+CV G+ +
Sbjct: 1159 SRKVGL--GYTPVCEALDGGFSPVQCDLAQGSCWCVLASGEEV 1199
>sp|O08710|THYG_MOUSE Thyroglobulin precursor
Length = 2766
Score = 59.3 bits (142), Expect = 5e-09
Identities = 31/102 (30%), Positives = 45/102 (44%), Gaps = 7/102 (6%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQCYCVDRDGKNIENYGAPIGE---SINCKCARDQ-DDYRKTK 258
+P C + G + +QC +C+CVD GK ++ G C+ R Q +
Sbjct: 617 VPSCTAGGSYEDIQCYAGECWCVDSRGKELDGSRVRGGRPRCPTKCEKQRAQMQSLASAQ 676
Query: 259 LLGKMF---RCTESGNYDSVQCIGSVCFCANEHGQAIEGKQT 375
G F CT G + VQC S C+C + GQ I G Q+
Sbjct: 677 PAGSSFFVPTCTREGYFLPVQCFNSECYCVDTEGQVIPGTQS 718
Score = 49.7 bits (117), Expect = 4e-06
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 16/93 (17%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQCYCVDRDGKNIENYGAPIGESINC-KCARDQDDYRKTKLLG 267
+P C G F PVQC S+CYCVD +G+ I + +GE+ C + Q + ++G
Sbjct: 684 VPTCTREGYFLPVQCFNSECYCVDTEGQVIPGTQSTVGEAKQCPSVCQLQAEQAFLGVVG 743
Query: 268 KMF---------------RCTESGNYDSVQCIG 321
+ +C+ SG + VQC G
Sbjct: 744 VLLSNSSMVPSISNVYIPQCSASGQWRHVQCDG 776
Score = 48.1 bits (113), Expect = 1e-05
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 10/102 (9%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCI--GSQCYCVDRDGKNI---ENYGAPIGESINCKCARDQ---DDY 246
+P+C +G F VQC G C+CVD DG+ + G P C+ + + Y
Sbjct: 50 VPQCSEDGSFQTVQCQNDGQSCWCVDSDGREVPGSRQLGRPTVCLSFCQLHKQRILLGSY 109
Query: 247 RKTKLLGKMFRCTESGNYDSVQC-IGSV-CFCANEHGQAIEG 366
+ + +C +SGNY VQC + V C+C + G + G
Sbjct: 110 INSTDALYLPQCQDSGNYAPVQCDLQRVQCWCVDTEGMEVYG 151
Score = 41.2 bits (95), Expect = 0.001
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 14/108 (12%)
Frame = +1
Query: 34 TPCLEKYSKSRSGGLLGAQI--------PKCDSNGDFSPVQC--IGSQCYCVDRDGKNIE 183
T CL + LLG+ I P+C +G+++PVQC QC+CVD +G +E
Sbjct: 91 TVCLSFCQLHKQRILLGSYINSTDALYLPQCQDSGNYAPVQCDLQRVQCWCVDTEG--ME 148
Query: 184 NYGAPIGESINCKCARDQDDYRKTKLLGKMFR----CTESGNYDSVQC 315
YG + +C R + + L G R CT G + VQC
Sbjct: 149 VYGTR-QQGRPTRCPRSCEIRNRRLLHGVGDRSPPQCTADGEFMPVQC 195
Score = 34.7 bits (78), Expect = 0.13
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Frame = +1
Query: 34 TPC-LEKYSKSRSGGLLGAQIPKCDSNGDFSPVQC-IGSQCYCVDRDGKNI---ENYGAP 198
T C +E+++ +R G + IP+C +G + VQC C+CVD G+ + G P
Sbjct: 300 TKCEVEQFAATRFGH---SYIPRCHRDGHYQTVQCQTEGMCWCVDAQGREVPGTRQQGQP 356
Query: 199 IGESINCKCARDQ 237
+ + CA ++
Sbjct: 357 PSCAADQSCALER 369
Score = 33.5 bits (75), Expect = 0.29
Identities = 29/106 (27%), Positives = 47/106 (44%), Gaps = 19/106 (17%)
Frame = +1
Query: 82 GAQIPKCDSNGDFSPVQCIG--SQCYCVDRDGKNIENYGAPIGES-------INCKCAR- 231
G +P+C+ G + PVQC QC+CVD G+ I G+ + S NC+ +R
Sbjct: 1026 GPYMPQCNMIGGWEPVQCHAGTGQCWCVDGRGEFIP--GSLMSRSSQMPQCPTNCELSRA 1083
Query: 232 -------DQDDYRKTKLLGKMF--RCTESGNYDSVQCIGSVCFCAN 342
Q ++ G +F C ++G Y Q G+ +C +
Sbjct: 1084 SGLISAWKQAGPQRNPGPGDLFIPVCLQTGEYVRKQTSGTGTWCVD 1129
Score = 29.3 bits (64), Expect = 5.5
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +1
Query: 277 RCTESGNYDSVQC-IGSVCFCANEHGQAIEG 366
RC G+Y +VQC +C+C + G+ + G
Sbjct: 319 RCHRDGHYQTVQCQTEGMCWCVDAQGREVPG 349
>sp|P01266|THYG_HUMAN Thyroglobulin precursor
Length = 2768
Score = 59.3 bits (142), Expect = 5e-09
Identities = 30/103 (29%), Positives = 48/103 (46%), Gaps = 8/103 (7%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQCYCVDRDGKNIENYGAPIGESINCKCARDQDDYRKTKLLGK 270
+P C + G + VQC +C+CV+ GK + G+ C ++ R L+G
Sbjct: 617 VPSCTTEGSYEDVQCFSGECWCVNSWGKELPGSRVRGGQP-RCPTDCEKQRARMQSLMGS 675
Query: 271 --------MFRCTESGNYDSVQCIGSVCFCANEHGQAIEGKQT 375
+ CT G++ VQC S C+C + GQAI G ++
Sbjct: 676 QPAGSTLFVPACTSEGHFLPVQCFNSECYCVDAEGQAIPGTRS 718
Score = 52.4 bits (124), Expect = 6e-07
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Frame = +1
Query: 4 SNICSANPKNTPCLEKYSKSRSGGLLGAQ-------IPKCDSNGDFSPVQCIGSQCYCVD 162
S + P+ EK ++R L+G+Q +P C S G F PVQC S+CYCVD
Sbjct: 649 SRVRGGQPRCPTDCEK-QRARMQSLMGSQPAGSTLFVPACTSEGHFLPVQCFNSECYCVD 707
Query: 163 RDGKNIENYGAPIGESINC 219
+G+ I + IG+ C
Sbjct: 708 AEGQAIPGTRSAIGKPKKC 726
Score = 45.8 bits (107), Expect = 6e-05
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 10/102 (9%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQC--IGSQCYCVDRDGKNI---ENYGAPIGESINCKCARDQ---DDY 246
+P+C +G F VQC G C+CV +G + G P+ C+ + Q Y
Sbjct: 49 VPQCAEDGSFQTVQCQNDGRSCWCVGANGSEVLGSRQPGRPVACLSFCQLQKQQILLSGY 108
Query: 247 RKTKLLGKMFRCTESGNYDSVQC-IGSV-CFCANEHGQAIEG 366
+ + +C +SG+Y VQC + V C+C + G + G
Sbjct: 109 INSTDTSYLPQCQDSGDYAPVQCDVQQVQCWCVDAEGMEVYG 150
Score = 42.0 bits (97), Expect = 8e-04
Identities = 26/80 (32%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGS--QCYCVDRDGKNIENYGA-PIGESINCKCARDQDDYRKTKL 261
+P+C +GD++PVQC QC+CVD +G +E YG +G C + + + R
Sbjct: 117 LPQCQDSGDYAPVQCDVQQVQCWCVDAEG--MEVYGTRQLGRPKRCPRSCEIRNRRLLHG 174
Query: 262 LGKMF--RCTESGNYDSVQC 315
+G +C+ G + VQC
Sbjct: 175 VGDKSPPQCSAEGEFMPVQC 194
Score = 37.0 bits (84), Expect = 0.026
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 19/106 (17%)
Frame = +1
Query: 82 GAQIPKCDSNGDFSPVQCIG--SQCYCVDRDGKNIENYGAPIGESINC-KCARDQDDYRK 252
G +P+CD+ G + PVQC C+CVD G I G+ S+ +C + R
Sbjct: 1025 GPYMPQCDAFGSWEPVQCHAGTGHCWCVDEKGGFIP--GSLTARSLQIPQCPTTCEKSRT 1082
Query: 253 TKLLGKMFR----------------CTESGNYDSVQCIGSVCFCAN 342
+ LL + C E+G Y +Q G+ +C +
Sbjct: 1083 SGLLSSWKQARSQENPSPKDLFVPACLETGEYARLQASGAGTWCVD 1128
Score = 35.8 bits (81), Expect = 0.058
Identities = 20/55 (36%), Positives = 25/55 (45%), Gaps = 6/55 (10%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQC-IGSQCYCVDRDGKNI---ENYGAP--IGESINCKCARDQ 237
+P C NGD+ VQC C+CVD GK + G P E +C R Q
Sbjct: 316 VPSCRRNGDYQAVQCQTEGPCWCVDAQGKEMHGTRQQGEPPSCAEGQSCASERQQ 370
Score = 30.8 bits (68), Expect = 1.9
Identities = 19/50 (38%), Positives = 26/50 (52%), Gaps = 7/50 (14%)
Frame = +1
Query: 91 IPKCDS-NGDFSPVQCIGSQ--CYCVDRDGKNIENY----GAPIGESINC 219
+P C + +G FSPVQC +Q C+CV G+ + G P ES C
Sbjct: 1166 VPACRAEDGGFSPVQCDQAQGSCWCVMDSGEEVPGTRVTGGQPACESPRC 1215
>sp|O88322|NID2_MOUSE Nidogen-2 precursor (NID-2) (Entactin-2)
Length = 1403
Score = 52.0 bits (123), Expect = 8e-07
Identities = 31/118 (26%), Positives = 56/118 (47%), Gaps = 23/118 (19%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQ--CYCVDRDGKNIENYGAPIGESINCKCARDQDDYRKTKLL 264
IP+CD G+F P+QC GS C+CVDR+G + P G S C + ++ + +
Sbjct: 988 IPQCDDQGNFVPLQCHGSTGFCWCVDRNGHEVPGTQTPPG-STPPHCGPPPEPTQRPRTV 1046
Query: 265 GKMFR-------------------CTESGNYDSVQCIG--SVCFCANEHGQAIEGKQT 375
+ +R C + G++ +QC G C+C ++ G+ ++G ++
Sbjct: 1047 CERWRESLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQGTRS 1104
Score = 41.2 bits (95), Expect = 0.001
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQ--CYCVDRDGKNIENYGAPIGESINC 219
+P+CD G F P+QC G C+CVD+DG+ ++ + G C
Sbjct: 1068 VPQCDDLGHFIPLQCHGKSDFCWCVDKDGRELQGTRSQPGTRPAC 1112
>sp|Q14112|NID2_HUMAN Nidogen-2 precursor (NID-2) (Osteonidogen)
Length = 1375
Score = 51.6 bits (122), Expect = 1e-06
Identities = 36/140 (25%), Positives = 65/140 (46%), Gaps = 26/140 (18%)
Frame = +1
Query: 34 TPCLEKYSKSRSG-GLLGAQ--IPKCDSNGDFSPVQCIGSQ--CYCVDRDGKNIENYGAP 198
TPC ++ +++ GA+ IP+CD G+F P+QC GS C+CVD DG + P
Sbjct: 938 TPCEQQQRHAQAQYAYPGARFHIPQCDEQGNFLPLQCHGSTGFCWCVDPDGHEVPGTQTP 997
Query: 199 IGESINCKCARDQDDYRKTKLLGKMFR-------------------CTESGNYDSVQCIG 321
G S C + ++ + + +R C + G++ +QC G
Sbjct: 998 PG-STPPHCGPSPEPTQRPPTICERWRENLLEHYGGTPRDDQYVPQCDDLGHFIPLQCHG 1056
Query: 322 --SVCFCANEHGQAIEGKQT 375
C+C ++ G+ ++G ++
Sbjct: 1057 KSDFCWCVDKDGREVQGTRS 1076
Score = 42.4 bits (98), Expect = 6e-04
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +1
Query: 91 IPKCDSNGDFSPVQCIGSQ--CYCVDRDGKNIENYGAPIGESINC 219
+P+CD G F P+QC G C+CVD+DG+ ++ + G + C
Sbjct: 1040 VPQCDDLGHFIPLQCHGKSDFCWCVDKDGREVQGTRSQPGTTPAC 1084
>sp|Q62288|TICN1_MOUSE Testican-1 precursor (SPOCK protein)
Length = 442
Score = 48.1 bits (113), Expect = 1e-05
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 8/64 (12%)
Frame = +1
Query: 13 CSANPKNTPC------LEKYSKSRSGGLLGAQIPKCDSNGDFSPVQCIGS--QCYCVDRD 168
C P PC ++K SK +S LLGA IP+C+ G + QC GS QC+CVD+
Sbjct: 307 CFQKPAGLPCQNEMNRIQKLSKGKS--LLGAFIPRCNEEGYYKATQCHGSTGQCWCVDKY 364
Query: 169 GKNI 180
G +
Sbjct: 365 GNEL 368
Score = 36.6 bits (83), Expect = 0.034
Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 3/78 (3%)
Frame = +1
Query: 148 CYCVDRDGKNIENYGAPIGESINCKCARDQDDYRKTKLLGKMF-RCTESGNYDSVQCIGS 324
CYC + G P +N R Q + LLG RC E G Y + QC GS
Sbjct: 305 CYCFQKPA------GLPCQNEMN----RIQKLSKGKSLLGAFIPRCNEEGYYKATQCHGS 354
Query: 325 V--CFCANEHGQAIEGKQ 372
C+C +++G + G +
Sbjct: 355 TGQCWCVDKYGNELAGSR 372
>sp|Q8BKV0|TICN3_MOUSE Testican-3 precursor (SPARC/osteonectin, CWCV, and Kazal-like
domains proteoglycan 3)
Length = 436
Score = 48.1 bits (113), Expect = 1e-05
Identities = 32/82 (39%), Positives = 41/82 (50%), Gaps = 8/82 (9%)
Frame = +1
Query: 13 CSANPKNTPCLEKYS--KSRSG--GLLGAQIPKCDSNGDFSPVQCIGS--QCYCVDRDGK 174
C ++ PC + S + R G LLG IP CD +G + P QC GS QC+CVDR G
Sbjct: 308 CFQRQQDPPCHTELSNIQKRQGIKKLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGN 367
Query: 175 NIENYGAPIGESIN--CKCARD 234
+ +G IN CA D
Sbjct: 368 EV------VGSRINGVADCAID 383
Score = 33.1 bits (74), Expect = 0.38
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +1
Query: 256 KLLGKMFR-CTESGNYDSVQCIGSV--CFCANEHGQAIEGKQ 372
KLLG+ C E G Y QC GSV C+C + +G + G +
Sbjct: 332 KLLGQYIPLCDEDGYYKPTQCHGSVGQCWCVDRYGNEVVGSR 373
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,080,066
Number of Sequences: 369166
Number of extensions: 1101483
Number of successful extensions: 3100
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2910
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3037
length of database: 68,354,980
effective HSP length: 102
effective length of database: 49,512,010
effective search space used: 3168768640
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)