Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_I20
(936 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 610 e-174
sp|P30163|ACT2_ONCVO Actin-2 609 e-174
sp|P30162|ACT1_ONCVO Actin-1 609 e-174
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 609 e-174
sp|P12716|ACTC_PISOC Actin, cytoplasmic 608 e-174
sp|P79818|ACTB_ORYLA Actin, cytoplasmic 1 (Beta-actin) (OlCA1) 608 e-174
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 608 e-174
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 608 e-174
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 608 e-174
sp|P10984|ACT2_CAEEL Actin-2 608 e-174
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 610 bits (1572), Expect = e-174
Identities = 300/313 (95%), Positives = 308/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTA-SASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TA S+SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVITIGNERFRCPEALFQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSG
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 898 GSTMYPGIADRMQ 936
GSTM+PGIADRMQ
Sbjct: 303 GSTMFPGIADRMQ 315
>sp|P30163|ACT2_ONCVO Actin-2
Length = 376
Score = 609 bits (1571), Expect = e-174
Identities = 300/313 (95%), Positives = 307/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
DE+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRT-ASASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM T AS+SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVIT+GNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCD+DIRKDLYAN VLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDIDIRKDLYANNVLSG 302
Query: 898 GSTMYPGIADRMQ 936
GSTMYPGIADRMQ
Sbjct: 303 GSTMYPGIADRMQ 315
>sp|P30162|ACT1_ONCVO Actin-1
Length = 376
Score = 609 bits (1571), Expect = e-174
Identities = 299/313 (95%), Positives = 308/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
DE+VAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEEVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRT-ASASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM T AS+SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVIT+GNERFRCPEALFQPSFLG+ES GIHE+TYNSIMKCD+DIRKDLYANIVLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHESTYNSIMKCDIDIRKDLYANIVLSG 302
Query: 898 GSTMYPGIADRMQ 936
G+TMYPGIADRMQ
Sbjct: 303 GTTMYPGIADRMQ 315
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 609 bits (1570), Expect = e-174
Identities = 299/313 (95%), Positives = 308/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS-ASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS +SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSG
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 898 GSTMYPGIADRMQ 936
GSTM+PGIADRMQ
Sbjct: 303 GSTMFPGIADRMQ 315
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 608 bits (1569), Expect = e-174
Identities = 300/313 (95%), Positives = 307/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRT-ASASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+T AS+SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSG
Sbjct: 243 LPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 898 GSTMYPGIADRMQ 936
GSTM+PGIADRMQ
Sbjct: 303 GSTMFPGIADRMQ 315
>sp|P79818|ACTB_ORYLA Actin, cytoplasmic 1 (Beta-actin) (OlCA1)
Length = 375
Score = 608 bits (1568), Expect = e-174
Identities = 298/313 (95%), Positives = 308/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
D+D+AALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 2 DDDIAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 61
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELR+APEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRIAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN+PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNSPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRT-ASASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM T AS+SSLEKSYE
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMGTAASSSSLEKSYE 241
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVITIGNERFRCPEALFQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSG
Sbjct: 242 LPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTYNSIMKCDVDIRKDLYANTVLSG 301
Query: 898 GSTMYPGIADRMQ 936
G+TMYPGIADRMQ
Sbjct: 302 GTTMYPGIADRMQ 314
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 608 bits (1568), Expect = e-174
Identities = 298/313 (95%), Positives = 308/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS-ASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS +SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVITIGNERFRCPEA++QPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSG
Sbjct: 243 LPDGQVITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 898 GSTMYPGIADRMQ 936
GSTM+PGIADRMQ
Sbjct: 303 GSTMFPGIADRMQ 315
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 608 bits (1568), Expect = e-174
Identities = 299/313 (95%), Positives = 307/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRT-ASASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM T A++SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVITIGNERFRCPEA+FQPSFLG+ES GIHETTYNSIMKCDVDIRKDLYAN VLSG
Sbjct: 243 LPDGQVITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 898 GSTMYPGIADRMQ 936
GSTM+PGIADRMQ
Sbjct: 303 GSTMFPGIADRMQ 315
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 608 bits (1568), Expect = e-174
Identities = 298/313 (95%), Positives = 308/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI+RLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRTAS-ASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM+TAS +SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVITIGNERFRCPEA+FQPSFLG+E+ GIHETTYNSIMKCDVDIRKDLYAN VLSG
Sbjct: 243 LPDGQVITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSG 302
Query: 898 GSTMYPGIADRMQ 936
GSTM+PGIADRMQ
Sbjct: 303 GSTMFPGIADRMQ 315
>sp|P10984|ACT2_CAEEL Actin-2
Length = 376
Score = 608 bits (1567), Expect = e-174
Identities = 298/313 (95%), Positives = 307/313 (98%), Gaps = 1/313 (0%)
Frame = +1
Query: 1 DEDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 180
D+DVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK
Sbjct: 3 DDDVAALVVDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSK 62
Query: 181 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 360
RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ
Sbjct: 63 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 122
Query: 361 IMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 540
IMFETFN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA
Sbjct: 123 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 182
Query: 541 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYIALDFDAEMRT-ASASSLEKSYE 717
GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCY+ALDF+ EM T AS+SSLEKSYE
Sbjct: 183 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSYE 242
Query: 718 LPDGQVITIGNERFRCPEALFQPSFLGLESVGIHETTYNSIMKCDVDIRKDLYANIVLSG 897
LPDGQVIT+GNERFRCPEALFQPSFLG+ES GIHET+YNSIMKCD+DIRKDLYAN VLSG
Sbjct: 243 LPDGQVITVGNERFRCPEALFQPSFLGMESAGIHETSYNSIMKCDIDIRKDLYANTVLSG 302
Query: 898 GSTMYPGIADRMQ 936
G+TMYPGIADRMQ
Sbjct: 303 GTTMYPGIADRMQ 315
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 111,664,468
Number of Sequences: 369166
Number of extensions: 2369482
Number of successful extensions: 7960
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 7226
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7526
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9654860130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)