Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_H17
(828 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P15513|MYOM_APLCA Myomodulin neuropeptides precursor [Co... 47 5e-05
sp|Q25413|MYOM_LYMST Myomodulin neuropeptides precursor [Co... 47 5e-05
sp|P18014|IPA7_SHIFL 60 kDa antigen 37 0.051
sp|Q12816|TROP_HUMAN Trophinin (MAGE-D3 antigen) 37 0.066
sp|Q52118|YMO3_ERWST Hypothetical 31.4 kDa protein in mobD ... 37 0.087
sp|P08045|XFIN_XENLA Zinc finger protein Xfin 37 0.087
sp|P35789|ZNF93_HUMAN Zinc finger protein 93 (Zinc finger p... 36 0.15
sp|P24709|INVO_CEBAL Involucrin 35 0.19
sp|P47043|ZAP1_YEAST Zinc-responsive transcriptional regula... 35 0.25
sp|Q9P255|ZN492_HUMAN Zinc finger protein 492 35 0.25
>sp|P15513|MYOM_APLCA Myomodulin neuropeptides precursor [Contains: Myomodulin A (MM-A)
(PMSMLRL-amide) (Neuron B16 peptide); Myomodulin B
(MM-B) (GSYRMMRL-amide); Myomodulin D (MM-D)
(GLSMLRL-amide); Myomodulin F (MM-F) (SLNMLRL-amide);
Myomodulin G (MM-G) (TLSMLRL-amide); Myomodulin H (MM-H)
(GLHMLRL-amide); Myomodulin I (MM-I) (SLSMLRL-amide)]
Length = 370
Score = 47.4 bits (111), Expect = 5e-05
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 250 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 309
Query: 292 P 290
P
Sbjct: 310 P 310
Score = 47.4 bits (111), Expect = 5e-05
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 260 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 319
Query: 292 P 290
P
Sbjct: 320 P 320
Score = 47.4 bits (111), Expect = 5e-05
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 270 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 329
Query: 292 P 290
P
Sbjct: 330 P 330
Score = 47.4 bits (111), Expect = 5e-05
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 280 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 339
Query: 292 P 290
P
Sbjct: 340 P 340
Score = 45.4 bits (106), Expect = 2e-04
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -3
Query: 469 LKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKKP 290
L L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P
Sbjct: 241 LSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 300
Score = 45.4 bits (106), Expect = 2e-04
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 290 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 349
Query: 292 PNQHQK 275
+ ++
Sbjct: 350 DDDEKE 355
Score = 41.2 bits (95), Expect = 0.004
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -3
Query: 448 KKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKKP 290
K+ L L K+P+ L K+P+ L K+P+ L K+P+ L K+P
Sbjct: 238 KRTLSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 290
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 250 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 290
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 260 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 300
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 270 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 310
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 280 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 320
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 290 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 330
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 300 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 340
Score = 30.4 bits (67), Expect = 6.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 126 LKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
L L K+P+ L K P+ L K+P+ L K+P
Sbjct: 241 LSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 280
>sp|Q25413|MYOM_LYMST Myomodulin neuropeptides precursor [Contains: GLQMLRL-amide;
QIPMLRL-amide; SMSMLRL-amide; SLSMLRL-amide; Myomodulin
A (PMSMLRL-amide)]
Length = 350
Score = 47.4 bits (111), Expect = 5e-05
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 249 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 308
Query: 292 P 290
P
Sbjct: 309 P 309
Score = 47.4 bits (111), Expect = 5e-05
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 259 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 318
Query: 292 P 290
P
Sbjct: 319 P 319
Score = 47.4 bits (111), Expect = 5e-05
Identities = 19/61 (31%), Positives = 31/61 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 269 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 328
Query: 292 P 290
P
Sbjct: 329 P 329
Score = 47.4 bits (111), Expect = 5e-05
Identities = 19/66 (28%), Positives = 33/66 (50%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKK 293
P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+
Sbjct: 279 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKR 338
Query: 292 PNQHQK 275
+ +K
Sbjct: 339 EDDEEK 344
Score = 45.4 bits (106), Expect = 2e-04
Identities = 19/60 (31%), Positives = 30/60 (50%)
Frame = -3
Query: 469 LKCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKKP 290
L L K+P+ L K+P+ L K+P+ L K+P+ L K+P+ L K+P
Sbjct: 240 LSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 299
Score = 41.2 bits (95), Expect = 0.004
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -3
Query: 448 KKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKKP 290
K+ L L K+P+ L K+P+ L K+P+ L K+P+ L K+P
Sbjct: 237 KRSLSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 289
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 249 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 289
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 259 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 299
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 269 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 309
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 279 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 319
Score = 32.3 bits (72), Expect = 1.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 129 PLKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
P+ L K+P+ L K P+ L K+P+ L K+P
Sbjct: 289 PMSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 329
Score = 30.4 bits (67), Expect = 6.2
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -1
Query: 126 LKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLSKKP 7
L L K+P+ L K P+ L K+P+ L K+P
Sbjct: 240 LSMLRLGKRPMSMLRLGKRPMSMLRLGKRPMSMLRLGKRP 279
>sp|P18014|IPA7_SHIFL 60 kDa antigen
Length = 532
Score = 37.4 bits (85), Expect = 0.051
Identities = 18/62 (29%), Positives = 32/62 (51%)
Frame = -1
Query: 441 LSNVPICPRNLSNVPICPKNLSNVPICPRNLSNVLICPKNLSNVPICPRNLISTRNHENA 262
LS +P P +L+ + + L N+P+ P +L+++ + L N+P P L + N
Sbjct: 76 LSVIPELPESLTTLSVRSNQLENLPVLPNHLTSLFVENNRLYNLPALPEKLKFLHVYYNR 135
Query: 261 LT 256
LT
Sbjct: 136 LT 137
Score = 31.2 bits (69), Expect = 3.6
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 1/76 (1%)
Frame = -1
Query: 471 LSNVPICPKNLSNVPICPRNLSNVPICPKNLSNVPICPRNLSNVLICPKNLSNVPICPRN 292
L+ + + L N+P+ P +L+++ + L N+P P L + + L+ +P P
Sbjct: 86 LTTLSVRSNQLENLPVLPNHLTSLFVENNRLYNLPALPEKLKFLHVYYNRLTTLPDLPDK 145
Query: 291 L-ISTRNHENALTIYQ 247
L I N +T Q
Sbjct: 146 LEILCAQRNNLVTFPQ 161
Score = 31.2 bits (69), Expect = 3.6
Identities = 19/83 (22%), Positives = 38/83 (45%)
Frame = -1
Query: 471 LSNVPICPKNLSNVPICPRNLSNVPICPKNLSNVPICPRNLSNVLICPKNLSNVPICPRN 292
L N+P+ P +L+++ + L N+P P+ L + + L+ + P L + N
Sbjct: 96 LENLPVLPNHLTSLFVENNRLYNLPALPEKLKFLHVYYNRLTTLPDLPDKLEILCAQRNN 155
Query: 291 LISTRNHENALTIYQTELIKYYN 223
L++ + I Q E ++N
Sbjct: 156 LVTFPQFSDRNNIRQKEYYFHFN 178
>sp|Q12816|TROP_HUMAN Trophinin (MAGE-D3 antigen)
Length = 1387
Score = 37.0 bits (84), Expect = 0.066
Identities = 23/57 (40%), Positives = 28/57 (49%)
Frame = +2
Query: 293 FLGQIGTFERFFGQIKTFERFLGQIGTFERFFGQIGTFERFLGQIGTFERFFGQIGT 463
F G +GT F G + T F G +GT F G GT F G +GT F G +GT
Sbjct: 1175 FGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGT 1231
Score = 33.1 bits (74), Expect = 0.96
Identities = 22/57 (38%), Positives = 28/57 (49%)
Frame = +2
Query: 293 FLGQIGTFERFFGQIKTFERFLGQIGTFERFFGQIGTFERFLGQIGTFERFFGQIGT 463
F G +GT F G T F G +GT F G +GT F G + T + F G +GT
Sbjct: 1195 FDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGGLVTSDGFGGGLGT 1251
Score = 31.6 bits (70), Expect = 2.8
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 293 FLGQIGTFERFFGQIKTFERFLGQIGTFERFFGQIGTFERFLGQIGTFERFFGQIGT 463
F G + T F G + T F G + T F G +GT F G GT F G +GT
Sbjct: 1165 FGGGLNTSAGFGGGLGTSAGFSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGT 1221
Score = 31.6 bits (70), Expect = 2.8
Identities = 21/57 (36%), Positives = 27/57 (47%)
Frame = +2
Query: 293 FLGQIGTFERFFGQIKTFERFLGQIGTFERFFGQIGTFERFLGQIGTFERFFGQIGT 463
F G GT F G + T F G +GT F G + T + F G +GT F +GT
Sbjct: 1205 FGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGT 1261
Score = 31.2 bits (69), Expect = 3.6
Identities = 21/57 (36%), Positives = 26/57 (45%)
Frame = +2
Query: 293 FLGQIGTFERFFGQIKTFERFLGQIGTFERFFGQIGTFERFLGQIGTFERFFGQIGT 463
F G + T F G + T F G GT F G +GT F G +GT F G + T
Sbjct: 1185 FSGGLSTSSGFDGGLGTSAGFGGGPGTSTGFGGGLGTSAGFSGGLGTSAGFGGGLVT 1241
Score = 31.2 bits (69), Expect = 3.6
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 293 FLGQIGTFERFFGQIKTFERFLGQIGTFERFFGQIGTFERFLGQIGTFERFFGQIGT 463
F G +GT F G + T F G + T + F G +GT F +GT F G + T
Sbjct: 1215 FGGGLGTSAGFSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLST 1271
Score = 31.2 bits (69), Expect = 3.6
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +2
Query: 293 FLGQIGTFERFFGQIKTFERFLGQIGTFERFFGQIGTFERFLGQIGTFERF 445
F G +GT F G + T + F G +GT F +GT F G + T + F
Sbjct: 1225 FSGGLGTSAGFGGGLVTSDGFGGGLGTNASFGSTLGTSAGFSGGLSTSDGF 1275
>sp|Q52118|YMO3_ERWST Hypothetical 31.4 kDa protein in mobD 3'region
Length = 295
Score = 36.6 bits (83), Expect = 0.087
Identities = 22/71 (30%), Positives = 38/71 (53%)
Frame = -1
Query: 489 YIFDRDLSNVPICPKNLSNVPICPRNLSNVPICPKNLSNVPICPRNLSNVLICPKNLSNV 310
Y+ + DLSN NLSN + +LS+ + NL+NV + +LSN ++ NL ++
Sbjct: 223 YLSEADLSNA-----NLSNADLKRADLSDANLSDANLTNVDLKRADLSNAILKGANLLHI 277
Query: 309 PICPRNLISTR 277
+ N+ T+
Sbjct: 278 NVEGTNMTGTK 288
Score = 33.5 bits (75), Expect = 0.73
Identities = 41/159 (25%), Positives = 64/159 (40%), Gaps = 4/159 (2%)
Frame = -1
Query: 480 DRDLSNVPICPKNLSNVPICPRNLSNVPICPKNLSNVPICPRNLSNVLICPKNLSNVPIC 301
D DLS+ + NLS + NL+ + +LSN + +L+N + +L NV +
Sbjct: 91 DADLSDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGADLTNANLNQTDLPNVNLS 150
Query: 300 PRNLISTRNHENALTIYQTEL-IKYYNXXXXXXXXXXXXXXXXXINWKTQLWLHF*S*P- 127
NL H N Y +E + N T L+ P
Sbjct: 151 GANLA----HANLTMAYLSEADLSNANLSNADLKRADLSNANLSGADLTNANLNQTDLPN 206
Query: 126 --LKCSNLSKKPLKCSNLSKSPLKCSNLSKKPLKCSNLS 16
L +NL+ L + LS++ L +NLS LK ++LS
Sbjct: 207 VNLSGANLAHANLTMAYLSEADLSNANLSNADLKRADLS 245
Score = 30.4 bits (67), Expect = 6.2
Identities = 24/80 (30%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = -1
Query: 489 YIFDRDLSNVPICPKNLSNVPICPRNLSNVPICPKNLSNVPICPRNLSNVLICPKNLSNV 310
Y+ + DLSN NLSN + +LSN + +L+N + +L NV + NL++
Sbjct: 163 YLSEADLSNA-----NLSNADLKRADLSNANLSGADLTNANLNQTDLPNVNLSGANLAHA 217
Query: 309 PICPRNL----ISTRNHENA 262
+ L +S N NA
Sbjct: 218 NLTMAYLSEADLSNANLSNA 237
Score = 30.0 bits (66), Expect = 8.1
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = -1
Query: 480 DRDLSNVPICPKNLSNVPICPRNLSNVPICPKNLSNVPICPRNLSNVLICPKNLSNVPIC 301
D DL + NLS+ + NLS+ + NL++ + LS + NLS +
Sbjct: 76 DTDLKGAYLSDANLSDADLSDANLSDANLSGANLAHANLTMAYLSEADLSNANLSGADLT 135
Query: 300 PRNLIST 280
NL T
Sbjct: 136 NANLNQT 142
>sp|P08045|XFIN_XENLA Zinc finger protein Xfin
Length = 1350
Score = 36.6 bits (83), Expect = 0.087
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 8/71 (11%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSK--------KPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPL 317
P +C+ K ++ S+L K KP KCS+ KK ERS L+K + + +KP
Sbjct: 381 PYQCAECHKGFIQKSDLVKHLRTHTGEKPFKCSHCDKKFTERSALAKH--QRTHTGEKPY 438
Query: 316 KCSNLSKKPNQ 284
KCS+ K+ Q
Sbjct: 439 KCSDCGKEFTQ 449
Score = 36.6 bits (83), Expect = 0.087
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSK--------KPLKCSNLSKKPLERSNL--------SKKPLKC 341
P KCS+ KK + S L+K KP KCS+ K+ +RSNL ++P KC
Sbjct: 409 PFKCSHCDKKFTERSALAKHQRTHTGEKPYKCSDCGKEFTQRSNLILHQRIHTGERPYKC 468
Query: 340 FNLSKKPLKCSNLSKKPNQH 281
+ ++ S+L K H
Sbjct: 469 TLCDRTFIQNSDLVKHQKVH 488
Score = 31.2 bits (69), Expect = 3.6
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 16/80 (20%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLSK--------KPLKCSNLSKKPLERSNLSK--------KPLKC 341
P CS+ +K ++ S+L K +P +C+ K +++S+L K KP KC
Sbjct: 353 PYLCSHCNKGFIQNSDLVKHFRTHTGERPYQCAECHKGFIQKSDLVKHLRTHTGEKPFKC 412
Query: 340 FNLSKKPLKCSNLSKKPNQH 281
+ KK + S L+K H
Sbjct: 413 SHCDKKFTERSALAKHQRTH 432
>sp|P35789|ZNF93_HUMAN Zinc finger protein 93 (Zinc finger protein HTF34)
Length = 616
Score = 35.8 bits (81), Expect = 0.15
Identities = 27/83 (32%), Positives = 33/83 (39%), Gaps = 8/83 (9%)
Frame = -3
Query: 508 LKTRLWLHF*S*PLKCSNLSKKPLKCSNLSK--------KPLKCSNLSKKPLERSNLSKK 353
L T +H P KC K + S LSK KP KC K + S L+K
Sbjct: 212 LNTHKRIHTGEKPYKCDKCDKAFIASSTLSKHEIIHTGKKPYKCEECGKAFNQSSTLTKH 271
Query: 352 PLKCFNLSKKPLKCSNLSKKPNQ 284
K + +KP KC K NQ
Sbjct: 272 --KKIHTGEKPYKCEECGKAFNQ 292
Score = 33.1 bits (74), Expect = 0.96
Identities = 22/62 (35%), Positives = 29/62 (46%)
Frame = -3
Query: 466 KCSNLSKKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKKPN 287
K S+ +KP KC K + S LSK E + KKP KC K + S+L+K
Sbjct: 412 KRSHTGEKPYKCEECGKAFVASSTLSKH--EIIHTGKKPYKCEECGKAFNQSSSLTKHKK 469
Query: 286 QH 281
H
Sbjct: 470 IH 471
Score = 30.0 bits (66), Expect = 8.1
Identities = 19/51 (37%), Positives = 24/51 (47%)
Frame = -3
Query: 448 KKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSK 296
+KP KC K S LS +RS+ +KP KC K + S LSK
Sbjct: 390 EKPYKCEECGKAFKYSSTLSSH--KRSHTGEKPYKCEECGKAFVASSTLSK 438
>sp|P24709|INVO_CEBAL Involucrin
Length = 428
Score = 35.4 bits (80), Expect = 0.19
Identities = 24/75 (32%), Positives = 38/75 (50%), Gaps = 10/75 (13%)
Frame = +3
Query: 300 DKLEHLRGFLDKLKHL---RGFLDKLERSRGFLDKLEHLRGFLDKLEHLRGFLD------ 452
++L+HL ++LKHL G L+ LE+ G L LE G L+ LE G L+
Sbjct: 250 EQLKHLEQQEEQLKHLEQQEGQLEHLEQQEGELKHLEQCEGQLEHLEQQEGQLELPEQQV 309
Query: 453 -KLEHLRGHDQKCNH 494
+ +HL +++ H
Sbjct: 310 GQSKHLEQEEKQLEH 324
Score = 30.4 bits (67), Expect = 6.2
Identities = 18/66 (27%), Positives = 34/66 (51%)
Frame = +3
Query: 297 LDKLEHLRGFLDKLKHLRGFLDKLERSRGFLDKLEHLRGFLDKLEHLRGFLDKLEHLRGH 476
+D+ +HL +L+H KL++ ++L+HL ++L+HL +LEHL
Sbjct: 219 VDQPKHLEQLEKQLEHPEQQEGKLKKLEEEEEQLKHLEQQEEQLKHLEQQEGQLEHLEQQ 278
Query: 477 DQKCNH 494
+ + H
Sbjct: 279 EGELKH 284
>sp|P47043|ZAP1_YEAST Zinc-responsive transcriptional regulator ZAP1
Length = 880
Score = 35.0 bits (79), Expect = 0.25
Identities = 25/63 (39%), Positives = 34/63 (53%)
Frame = -3
Query: 448 KKPLKCSNLSKKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKCSNLSKKPNQHQKS* 269
+KP KC +KK S+L K R++ +KPL+C K+ + SNLSK HQK
Sbjct: 793 EKPYKCHICNKKFAISSSL--KIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTHQKKY 850
Query: 268 KRS 260
K S
Sbjct: 851 KCS 853
Score = 33.1 bits (74), Expect = 0.96
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Frame = -3
Query: 511 NLKTRLWLHF*S*PLKCSNLSKKPLKCSNLSK------KPLKCSNLSKKPLERSNLSKKP 350
+LK + H PL+C K+ + SNLSK K KCS+ SK + L+ +
Sbjct: 810 SLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTHQKKYKCSDCSKSFDDLGKLNSQK 869
Query: 349 LKCFNLSKKP 320
+KC L +KP
Sbjct: 870 VKC-ALERKP 878
>sp|Q9P255|ZN492_HUMAN Zinc finger protein 492
Length = 574
Score = 35.0 bits (79), Expect = 0.25
Identities = 25/71 (35%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Frame = -3
Query: 472 PLKCSNLSKKPLKCSNLS--------KKPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPL 317
P KC K + SNLS KKP KC K S+L+ K + KKP
Sbjct: 211 PYKCKECGKAYNETSNLSTHKRIHTGKKPYKCEECGKAFNRLSHLTTH--KIIHTGKKPY 268
Query: 316 KCSNLSKKPNQ 284
KC K NQ
Sbjct: 269 KCEECGKAFNQ 279
Score = 32.3 bits (72), Expect = 1.6
Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 8/84 (9%)
Frame = -3
Query: 511 NLKTRLWLHF*S*PLKCSNLSKKPLKCSNLS--------KKPLKCSNLSKKPLERSNLSK 356
NL T +H P KC K + S+L+ KKP KC K + +NL+
Sbjct: 226 NLSTHKRIHTGKKPYKCEECGKAFNRLSHLTTHKIIHTGKKPYKCEECGKAFNQSANLTT 285
Query: 355 KPLKCFNLSKKPLKCSNLSKKPNQ 284
K + +KP KC + +Q
Sbjct: 286 H--KRIHTGEKPYKCEECGRAFSQ 307
Score = 31.6 bits (70), Expect = 2.8
Identities = 23/69 (33%), Positives = 28/69 (40%), Gaps = 8/69 (11%)
Frame = -3
Query: 466 KCSNLSKKPLKCSNLSK--------KPLKCSNLSKKPLERSNLSKKPLKCFNLSKKPLKC 311
KC K S+L++ KP KC K E SNLS K + KKP KC
Sbjct: 185 KCKECEKSFCMLSHLAQHKRIHSGEKPYKCKECGKAYNETSNLSTH--KRIHTGKKPYKC 242
Query: 310 SNLSKKPNQ 284
K N+
Sbjct: 243 EECGKAFNR 251
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,486,421
Number of Sequences: 369166
Number of extensions: 1881395
Number of successful extensions: 6853
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6437
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8004331590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)