Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_H06
(903 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q16956|GRP78_APLCA 78 kDa glucose-regulated protein prec... 454 e-127
sp|P06761|GRP78_RAT 78 kDa glucose-regulated protein precur... 453 e-127
sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein prec... 451 e-126
sp|P11021|GRP78_HUMAN 78 kDa glucose-regulated protein prec... 450 e-126
sp|P20029|GRP78_MOUSE 78 kDa glucose-regulated protein prec... 450 e-126
sp|P07823|GRP78_MESAU 78 kDa glucose-regulated protein prec... 450 e-126
sp|Q91883|GRP78_XENLA 78 kDa glucose-regulated protein prec... 447 e-125
sp|P19208|HSP7C_CAEBR Heat shock 70 kDa protein C precursor 444 e-124
sp|P27420|HSP7C_CAEEL Heat shock 70 kDa protein C precursor 442 e-124
sp|Q24798|GRP78_ECHGR 78 kDa glucose-regulated protein prec... 436 e-122
>sp|Q16956|GRP78_APLCA 78 kDa glucose-regulated protein precursor (GRP 78) (BiP) (Protein
1603)
Length = 667
Score = 454 bits (1169), Expect = e-127
Identities = 228/301 (75%), Positives = 258/301 (85%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
TMKPV++VL+DA++K +DI+EIVLVGGSTRIPKVQQLVKE+FNGKEPSRGINPDE
Sbjct: 347 TMKPVKQVLEDADLKTDDIDEIVLVGGSTRIPKVQQLVKEYFNGKEPSRGINPDEAVAYG 406
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
E+TGD+VLLDV PLT+GIETVGGVMTKLIPRNTVIPTKKSQ+FSTAADN
Sbjct: 407 AAVQAGVLSGEEDTGDLVLLDVNPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADN 466
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTIQV+EGER MTKDNH LGKFDLTGIP APRGVPQIEVTFEIDVNGILKV+AEDKG
Sbjct: 467 QPTVTIQVYEGERSMTKDNHLLGKFDLTGIPPAPRGVPQIEVTFEIDVNGILKVTAEDKG 526
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TG+KN+IVIQ DQNRL+ EDIE+MI DAE YAD+DKKVKE+V+AKN+LE YAYSLK QI
Sbjct: 527 TGSKNQIVIQNDQNRLSPEDIERMINDAEKYADEDKKVKEKVDAKNELESYAYSLKNQIG 586
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLYQQ 900
DKEKLG KLS DKE IT+A +EAI WLE N +A+SE +K ++E IV PIMTKLY+Q
Sbjct: 587 DKEKLGAKLSDEDKEKITEAVDEAIKWLESNAEAESEAFNEKKTELEGIVQPIMTKLYEQ 646
Query: 901 S 903
S
Sbjct: 647 S 647
>sp|P06761|GRP78_RAT 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
(Steroidogenesis-activator polypeptide)
Length = 654
Score = 453 bits (1166), Expect = e-127
Identities = 219/298 (73%), Positives = 257/298 (86%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
TMKPV+KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 338 TMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYG 397
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DN
Sbjct: 398 AAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDN 457
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTI+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKG
Sbjct: 458 QPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKG 517
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TGNKNKI I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI
Sbjct: 518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIG 577
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 894
DKEKLGGKLSP DKET+ KA EE I WLE +Q AD E+ KA+KK++E+IV PI++KLY
Sbjct: 578 DKEKLGGKLSPEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
>sp|Q90593|GRP78_CHICK 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 652
Score = 451 bits (1161), Expect = e-126
Identities = 218/298 (73%), Positives = 257/298 (86%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
TMKPV+KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 336 TMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYG 395
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DN
Sbjct: 396 AAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDN 455
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTI+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKG
Sbjct: 456 QPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKG 515
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TGNKNKI I DQNRL E+IE+M+ DAE +A++DKK+KER++A+N+LE YAYSLK QI
Sbjct: 516 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDARNELESYAYSLKNQIG 575
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 894
DKEKLGGKLS DKETI KA EE I WLE +Q AD E+ K++KK++E++V PI++KLY
Sbjct: 576 DKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKSKKKELEEVVQPIVSKLY 633
>sp|P11021|GRP78_HUMAN 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP) (Endoplasmic reticulum
lumenal Ca(2+) binding protein grp78)
Length = 654
Score = 450 bits (1158), Expect = e-126
Identities = 218/298 (73%), Positives = 256/298 (85%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
TMKPV+KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 338 TMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYG 397
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DN
Sbjct: 398 AAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDN 457
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTI+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKG
Sbjct: 458 QPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKG 517
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TGNKNKI I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI
Sbjct: 518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIG 577
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 894
DKEKLGGKLS DKET+ KA EE I WLE +Q AD E+ KA+KK++E+IV PI++KLY
Sbjct: 578 DKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
>sp|P20029|GRP78_MOUSE 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 655
Score = 450 bits (1158), Expect = e-126
Identities = 218/298 (73%), Positives = 256/298 (85%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
TMKPV+KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 339 TMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYG 398
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DN
Sbjct: 399 AAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDN 458
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTI+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKG
Sbjct: 459 QPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKG 518
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TGNKNKI I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI
Sbjct: 519 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIG 578
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 894
DKEKLGGKLS DKET+ KA EE I WLE +Q AD E+ KA+KK++E+IV PI++KLY
Sbjct: 579 DKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 636
>sp|P07823|GRP78_MESAU 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 654
Score = 450 bits (1158), Expect = e-126
Identities = 218/298 (73%), Positives = 256/298 (85%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
TMKPV+KVL+D+++KK DI+EIVLVGGSTRIPK+QQLVKEFFNGKEPSRGINPDE
Sbjct: 338 TMKPVQKVLEDSDLKKSDIDEIVLVGGSTRIPKIQQLVKEFFNGKEPSRGINPDEAVAYG 397
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DN
Sbjct: 398 AAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDN 457
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTI+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKG
Sbjct: 458 QPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKG 517
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TGNKNKI I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI
Sbjct: 518 TGNKNKITITNDQNRLTPEEIERMVNDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIG 577
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 894
DKEKLGGKLS DKET+ KA EE I WLE +Q AD E+ KA+KK++E+IV PI++KLY
Sbjct: 578 DKEKLGGKLSSEDKETMEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIISKLY 635
>sp|Q91883|GRP78_XENLA 78 kDa glucose-regulated protein precursor (GRP 78) (Immunoglobulin
heavy chain binding protein) (BiP)
Length = 658
Score = 447 bits (1149), Expect = e-125
Identities = 218/298 (73%), Positives = 253/298 (84%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
TMKPV+KVL D+++KK DI+EIVLVGGSTRIPK+QQLVKE FNGKEPSRGINPDE
Sbjct: 339 TMKPVQKVLDDSDLKKSDIDEIVLVGGSTRIPKIQQLVKELFNGKEPSRGINPDEAVAYG 398
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
++TGD+VLLDVCPLTLGIETVGGVMTKLIPRNTV+PTKKSQ+FSTA+DN
Sbjct: 399 AAVQAGVLSGDQDTGDLVLLDVCPLTLGIETVGGVMTKLIPRNTVVPTKKSQIFSTASDN 458
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTI+V+EGERP+TKDNH LG FDLTGIP APRGVPQIEVTFEIDVNGIL+V+AEDKG
Sbjct: 459 QPTVTIKVYEGERPLTKDNHLLGTFDLTGIPPAPRGVPQIEVTFEIDVNGILRVTAEDKG 518
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TGNKNKI I DQNRL E+IE+M+ DAE +A++DKK+KER++ +N+LE YAYSLK QI
Sbjct: 519 TGNKNKITITNDQNRLTPEEIERMVTDAEKFAEEDKKLKERIDTRNELESYAYSLKNQIG 578
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLY 894
DKEKLGGKLS DKETI KA EE I WLE +Q AD E+ KA+KK++E+IV PI+ KLY
Sbjct: 579 DKEKLGGKLSSEDKETIEKAVEEKIEWLESHQDADIEDFKAKKKELEEIVQPIVGKLY 636
>sp|P19208|HSP7C_CAEBR Heat shock 70 kDa protein C precursor
Length = 661
Score = 444 bits (1141), Expect = e-124
Identities = 223/299 (74%), Positives = 253/299 (84%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
T+KPV+KVL+D+++KK+D++EIVLVGGSTRIPKVQQL+KEFFNGKEPSRGINPDE
Sbjct: 343 TLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYG 402
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
E+TG+IVLLDV PLT+GIETVGGVMTKLI RNTVIPTKKSQVFSTAADN
Sbjct: 403 AAVQGGVISGEEDTGEIVLLDVNPLTMGIETVGGVMTKLISRNTVIPTKKSQVFSTAADN 462
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTIQVFEGERPMTKDNH LGKFDLTGIP APRGVPQIEVTFEIDVNGIL V+AEDKG
Sbjct: 463 QPTVTIQVFEGERPMTKDNHQLGKFDLTGIPPAPRGVPQIEVTFEIDVNGILHVTAEDKG 522
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TGNKNKI I DQNRL+ EDIE+MI DAE +A+ DKKVKE+ EA+N+LE YAYSLK QI
Sbjct: 523 TGNKNKITITNDQNRLSPEDIERMINDAEKFAEDDKKVKEKAEARNELESYAYSLKNQIG 582
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLYQ 897
DKEKLGGKL DK+TI +A +EAISWL N A +EELK QKK++E V PI++KLY+
Sbjct: 583 DKEKLGGKLDEDDKKTIEEAVDEAISWLGSNADASAEELKEQKKELEGKVQPIVSKLYK 641
>sp|P27420|HSP7C_CAEEL Heat shock 70 kDa protein C precursor
Length = 661
Score = 442 bits (1137), Expect = e-124
Identities = 221/301 (73%), Positives = 254/301 (84%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
T+KPV+KVL+D+++KK+D++EIVLVGGSTRIPKVQQL+KEFFNGKEPSRGINPDE
Sbjct: 343 TLKPVQKVLEDSDLKKDDVHEIVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYG 402
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
E+TG+IVLLDV PLT+GIETVGGVMTKLI RNTVIPTKKSQVFSTAADN
Sbjct: 403 AAVQGGVISGEEDTGEIVLLDVNPLTMGIETVGGVMTKLIGRNTVIPTKKSQVFSTAADN 462
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTIQVFEGERPMTKDNH LGKFDLTG+P APRGVPQIEVTFEIDVNGIL V+AEDKG
Sbjct: 463 QPTVTIQVFEGERPMTKDNHQLGKFDLTGLPPAPRGVPQIEVTFEIDVNGILHVTAEDKG 522
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TGNKNKI I DQNRL+ EDIE+MI DAE +A+ DKKVK++ EA+N+LE YAY+LK QI
Sbjct: 523 TGNKNKITITNDQNRLSPEDIERMINDAEKFAEDDKKVKDKAEARNELESYAYNLKNQIE 582
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLYQQ 900
DKEKLGGKL DK+TI +A EEAISWL N +A +EELK QKK +E V PI++KLY+
Sbjct: 583 DKEKLGGKLDEDDKKTIEEAVEEAISWLGSNAEASAEELKEQKKDLESKVQPIVSKLYKD 642
Query: 901 S 903
+
Sbjct: 643 A 643
>sp|Q24798|GRP78_ECHGR 78 kDa glucose-regulated protein precursor (GRP 78)
Length = 651
Score = 436 bits (1121), Expect = e-122
Identities = 213/299 (71%), Positives = 251/299 (83%)
Frame = +1
Query: 1 TMKPVEKVLQDAEMKKEDINEIVLVGGSTRIPKVQQLVKEFFNGKEPSRGINPDEXXXXX 180
T+KPV KV++D+ +KKEDI++IVLVGGSTRIPK+QQLVKEFFNGKEP RGINPDE
Sbjct: 337 TLKPVMKVMEDSGLKKEDIDDIVLVGGSTRIPKIQQLVKEFFNGKEPIRGINPDEAVAYG 396
Query: 181 XXXXXXXXXXXEETGDIVLLDVCPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFSTAADN 360
E+TGDIVLLDVCPLT+GIETVGGVMTKLIPRNTVIPTKKSQ+FSTAADN
Sbjct: 397 AAVQAGVISGVEDTGDIVLLDVCPLTMGIETVGGVMTKLIPRNTVIPTKKSQIFSTAADN 456
Query: 361 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPAAPRGVPQIEVTFEIDVNGILKVSAEDKG 540
QPTVTIQVFEGERPMTKDNHFLGKFDLTGIP APRG+PQIEVTFEIDVNGIL+VSAEDKG
Sbjct: 457 QPTVTIQVFEGERPMTKDNHFLGKFDLTGIPPAPRGLPQIEVTFEIDVNGILRVSAEDKG 516
Query: 541 TGNKNKIVIQKDQNRLNTEDIEKMIKDAETYADQDKKVKERVEAKNDLEGYAYSLKTQIN 720
TG K+ IVI K+ NR+ E+IE+MI+DAE ++DQDK+VKERVE +NDLE AYS+K Q+
Sbjct: 517 TGKKSNIVINKETNRITPEEIERMIQDAEKFSDQDKQVKERVEVRNDLESLAYSIKNQVK 576
Query: 721 DKEKLGGKLSPSDKETITKATEEAISWLEKNQQADSEELKAQKKKVEDIVTPIMTKLYQ 897
DKEK+GGKLS + +TI A +EAI W+E N QA++ + K QK +E +V PI++KLY+
Sbjct: 577 DKEKMGGKLSDDEIKTIEDAADEAIKWMENNPQAETSDYKKQKANLESVVQPIVSKLYE 635
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.309 0.130 0.352
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,989,628
Number of Sequences: 369166
Number of extensions: 1426406
Number of successful extensions: 5930
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4770
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5006
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9126484700
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)