Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_H03
(976 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-t... 565 e-161
sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1... 565 e-161
sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain 564 e-160
sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain 563 e-160
sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific 562 e-160
sp|P06603|TBA1_DROME Tubulin alpha-1 chain 562 e-160
sp|P02550|TBA_PIG Tubulin alpha chain 561 e-160
sp|P18258|TBA1_PARLI Tubulin alpha-1 chain 561 e-159
sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6... 561 e-159
sp|P02552|TBA1_CHICK Tubulin alpha-1 chain 561 e-159
>sp|P05214|TBA3_MOUSE Tubulin alpha-3/alpha-7 chain (Alpha-tubulin 3/7) (Alpha-tubulin
isotype M-alpha-3/7)
sp|Q68FR8|TBA3_RAT Tubulin alpha-3 chain (Alpha-tubulin 3)
sp|Q13748|TBA2_HUMAN Tubulin alpha-2 chain (Alpha-tubulin 2)
Length = 450
Score = 565 bits (1457), Expect = e-161
Identities = 272/279 (97%), Positives = 278/279 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEF++YPAPQ+STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT+APVISAEKA
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSV 851
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DSV
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
>sp|P68369|TBA1_MOUSE Tubulin alpha-1 chain (Alpha-tubulin 1) (Alpha-tubulin isotype
M-alpha-1)
sp|P68362|TBA2_CRIGR Tubulin alpha-2 chain (Alpha-tubulin 2) (Alpha-tubulin II)
sp|Q71U36|TBA3_HUMAN Tubulin alpha-3 chain (Alpha-tubulin 3) (Tubulin B-alpha-1)
sp|P68370|TBA1_RAT Tubulin alpha-1 chain (Alpha-tubulin 1)
Length = 451
Score = 565 bits (1455), Expect = e-161
Identities = 271/279 (97%), Positives = 278/279 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEFS+YPAPQ+STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT+APVISAEKA
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSV 851
RAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG DSV
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV 440
>sp|Q8T6A5|TBA1_APLCA Tubulin alpha-1 chain
Length = 451
Score = 564 bits (1454), Expect = e-160
Identities = 272/279 (97%), Positives = 278/279 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEFSVYPAPQ+STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFSVYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
P+YTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT+APVISAEKA
Sbjct: 222 PSYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQLSVAEITNACFEPANQ+VKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEQLSVAEITNACFEPANQLVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSV 851
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DSV
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
>sp|P41383|TBA2_PATVU Tubulin alpha-2/alpha-4 chain
Length = 452
Score = 563 bits (1452), Expect = e-160
Identities = 271/279 (97%), Positives = 278/279 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEF++YPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFAIYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT+APVISAEKA
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQL+VAEITNACFEPANQMVKCDPRHGKYM+CCMLYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEQLTVAEITNACFEPANQMVKCDPRHGKYMSCCMLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSV 851
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DSV
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
>sp|P18288|TBAT_ONCMY Tubulin alpha chain, testis-specific
Length = 450
Score = 562 bits (1448), Expect = e-160
Identities = 270/279 (96%), Positives = 276/279 (98%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEF++YPAPQ+STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL T+APVISAEKA
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHE LSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEMLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSV 851
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DSV
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDSV 440
>sp|P06603|TBA1_DROME Tubulin alpha-1 chain
Length = 450
Score = 562 bits (1448), Expect = e-160
Identities = 270/278 (97%), Positives = 276/278 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEF++YPAPQ+STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPL T+APVISAEKA
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLVTYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 848
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGMDS 439
>sp|P02550|TBA_PIG Tubulin alpha chain
Length = 451
Score = 561 bits (1447), Expect = e-160
Identities = 269/279 (96%), Positives = 277/279 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEFS+YPAPQ+STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPR HFPLAT+APVISAEKA
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRAHFPLATYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINY+PPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYEPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSV 851
RAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG DSV
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV 440
>sp|P18258|TBA1_PARLI Tubulin alpha-1 chain
Length = 452
Score = 561 bits (1446), Expect = e-159
Identities = 270/278 (97%), Positives = 277/278 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEF+VYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFAVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT+APVISAEKA
Sbjct: 222 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQL+V+EITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEQLTVSEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 848
RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVG DS
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGVDS 439
>sp|P68373|TBA6_MOUSE Tubulin alpha-6 chain (Alpha-tubulin 6) (Alpha-tubulin isotype
M-alpha-6)
sp|P68365|TBA3_CRIGR Tubulin alpha-3 chain (Alpha-tubulin 3) (Alpha-tubulin III)
Length = 449
Score = 561 bits (1446), Expect = e-159
Identities = 269/278 (96%), Positives = 277/278 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEFS+YPAPQ+STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 162 GKKSKLEFSIYPAPQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 221
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+ QIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT+APVISAEKA
Sbjct: 222 PTYTNLNRLISQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 281
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQL+VAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 282 YHEQLTVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTI 341
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 342 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 401
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADS 848
RAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVGADS
Sbjct: 402 RAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGADS 439
>sp|P02552|TBA1_CHICK Tubulin alpha-1 chain
Length = 412
Score = 561 bits (1446), Expect = e-159
Identities = 270/279 (96%), Positives = 277/279 (99%)
Frame = +3
Query: 15 GKKSKLEFSVYPAPQISTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 194
GKKSKLEFS+YPA Q+STAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER
Sbjct: 123 GKKSKLEFSIYPARQVSTAVVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIER 182
Query: 195 PTYTNLNRLVGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATFAPVISAEKA 374
PTYTNLNRL+GQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLAT+APVISAEKA
Sbjct: 183 PTYTNLNRLIGQIVSSITASLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKA 242
Query: 375 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTI 554
YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACC+LYRGDVVPKDVNAAIATIKTKRTI
Sbjct: 243 YHEQLSVAEITNACFEPANQMVKCDPRHGKYMACCLLYRGDVVPKDVNAAIATIKTKRTI 302
Query: 555 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYSK 734
QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMY+K
Sbjct: 303 QFVDWCPTGFKVGINYQPPTVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAK 362
Query: 735 RAFVHWYVGEGMEEGEFSEAREDLAALEKDYEEVGADSV 851
RAFVHWYVGEGMEEGEFSEARED+AALEKDYEEVG DSV
Sbjct: 363 RAFVHWYVGEGMEEGEFSEAREDMAALEKDYEEVGVDSV 401
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,084,158
Number of Sequences: 369166
Number of extensions: 1973491
Number of successful extensions: 5862
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5464
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5614
length of database: 68,354,980
effective HSP length: 111
effective length of database: 47,849,395
effective search space used: 10191921135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)