Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_G21
(705 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P04931|ARP_PLAFA Asparagine-rich protein (AG319) (ARP) 37 0.039
sp|Q22366|RIM_CAEEL Rab-3 interacting molecule unc-10 (Rim)... 37 0.039
sp|O43952|TGP1_TETTH G-quartet DNA binding protein TGP1 36 0.11
sp|Q4A0V8|UAFA_STAS1 Uro-adherence factor A precursor 35 0.15
sp|P34756|FAB1_YEAST 1-phosphatidylinositol-3-phosphate 5-k... 34 0.43
sp|P14196|AAC2_DICDI AAC-rich mRNA clone AAC11 protein 34 0.43
sp|P40957|MAD1_YEAST Spindle assembly checkpoint component ... 33 0.57
sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kin... 33 0.57
sp|Q17060|MRJP3_APIME Major royal jelly protein 3 precursor... 33 0.74
sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1 (PI3-... 32 1.6
>sp|P04931|ARP_PLAFA Asparagine-rich protein (AG319) (ARP)
Length = 537
Score = 37.4 bits (85), Expect = 0.039
Identities = 33/173 (19%), Positives = 65/173 (37%), Gaps = 9/173 (5%)
Frame = +1
Query: 1 NKASEKGHFISNRQDKPGRNV---GHNQNMNVKN-YSKHENTSQNGNLRNVDSVPLLKRQ 168
N+ + F+ N + +N G N N++ KN Y + ++ +N + D+ +K
Sbjct: 81 NQQTRFSSFMENENENENKNYHTGGMNNNIHFKNKYDNNNSSMKNTDNNKTDTSYNMKGT 140
Query: 169 PDQYRQIDKY--NVENLLQSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINN 342
+ Y N+ N+ + G + + + + NN
Sbjct: 141 INNDNNNMDYLRNINNINEYKGSAKNKFYTNYMNKNNLKFTQNNNDNMNINEDNNNNNNN 200
Query: 343 GPYQNG---NVQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLN 492
NG N QN + N+N ++N +NN++ + ++ DKN N
Sbjct: 201 NNNNNGVFSNYQNNNMNRNNSINIKRNLNNNNNINNNMNKMGSQDKNQNSNNN 253
Score = 33.1 bits (74), Expect = 0.74
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 1/80 (1%)
Frame = +1
Query: 316 NEVRSKINNGPYQNGNVQNF-SKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLN 492
N + S +NN N++N S+NKN A N ND +NN +KNN +N
Sbjct: 403 NNMNSAVNNNSSNGNNMKNENSENKNVADN-NDSLNN--------------NKNNNNNIN 447
Query: 493 KGDVHVLNKIIHNPNFESNK 552
+ N ++N N +N+
Sbjct: 448 MNESINNNNTLNNNNEYNNQ 467
Score = 30.4 bits (67), Expect = 4.8
Identities = 34/146 (23%), Positives = 55/146 (37%), Gaps = 1/146 (0%)
Frame = +1
Query: 1 NKASEKGHFISNRQDKPGRNVGHNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQY 180
N + G F SN Q+ N+ N ++N+K + + N + N N+ + S K Q
Sbjct: 200 NNNNNNGVF-SNYQNN---NMNRNNSINIKR-NLNNNNNINNNMNKMGSQD--KNQNSNN 252
Query: 181 RQIDKYNVENLLQSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQN- 357
YN +N S N++ + N + +NN N
Sbjct: 253 NFYMNYNYQNRKNSMNNNMNNN---------------------MNNNMNHNMNNNMNHNM 291
Query: 358 GNVQNFSKNKNEAVNKNDKINNDSRL 435
N N + N N N N+ +NN + L
Sbjct: 292 NNNMNHNMNNNMNHNMNNNMNNINSL 317
Score = 30.0 bits (66), Expect = 6.2
Identities = 36/173 (20%), Positives = 65/173 (37%), Gaps = 1/173 (0%)
Frame = +1
Query: 34 NRQDKPGRNVGHNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQIDKYNVENL 213
N +++ N ++NMN N N++ +LRN +S+ + + Y N +
Sbjct: 32 NFKNQYNNNYKFDENMNNSNTMHSRNSNVEEHLRN-NSIDMNNSNINNYT-----NQQTR 85
Query: 214 LQSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNGNVQNFSKNKNE 393
SF N + + N + K N N +++N NK +
Sbjct: 86 FSSFMENEN------------ENENKNYHTGGMNNNIHFK-NKYDNNNSSMKNTDNNKTD 132
Query: 394 -AVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNKGDVHVLNKIIHNPNFESN 549
+ N INND+ + +++ G NK + +NK +N F N
Sbjct: 133 TSYNMKGTINNDNNNMDYLRNINNINEYKGSAKNKFYTNYMNK--NNLKFTQN 183
>sp|Q22366|RIM_CAEEL Rab-3 interacting molecule unc-10 (Rim) (Uncoordinated protein 10)
Length = 1563
Score = 37.4 bits (85), Expect = 0.039
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +1
Query: 337 NNGPYQNGN---VQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNKGDVH 507
N P QN N +QN +N+N N + NN + +A Q + + +N Q+N+ + +
Sbjct: 206 NQHPNQNHNQNQMQNPHQNQNHVQNNHQGANNHQQNNRRAMQQQPMSQNQANQINQMNQN 265
Query: 508 VLNKIIHNPNFESNKK 555
+ HN N N++
Sbjct: 266 QNQQQSHNQNMTQNQR 281
>sp|O43952|TGP1_TETTH G-quartet DNA binding protein TGP1
Length = 725
Score = 35.8 bits (81), Expect = 0.11
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +1
Query: 337 NNGP--YQNGNVQNFSKNKNE----AVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNKG 498
NN P Y+N +VQN + NKN+ + N+ N D+R G+ RQ ++NN N G
Sbjct: 513 NNQPNKYKNTSVQNNNNNKNQQRSQSQNQRPPRNYDNRQGGENRNNRQRNENNRNNFN-G 571
Query: 499 DVHVLNKIIHNPNFESNK 552
+ H +N N N + N+
Sbjct: 572 NGHRVN----NQNNQRNR 585
Score = 30.0 bits (66), Expect = 6.2
Identities = 36/158 (22%), Positives = 53/158 (33%), Gaps = 1/158 (0%)
Frame = +1
Query: 34 NRQDKPGRNVGHNQN-MNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQIDKYNVEN 210
N Q N H+QN N +N KH N+ N QP++Y+ +V+N
Sbjct: 484 NHQGGQRGNRSHSQNNRNQRNRDKHHNSQNN--------------QPNKYKNT---SVQN 526
Query: 211 LLQSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNGNVQNFSKNKN 390
+ + S +NE NG N QN +N+N
Sbjct: 527 NNNNKNQQRSQSQNQRPPRNYDNRQGGENRNNRQRNENNRNNFNGNGHRVNNQNNQRNRN 586
Query: 391 EAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNKGDV 504
+ +N NN Q + L+ GQ G V
Sbjct: 587 SSYPRN---NNYDHHHNQQTDISGLEPGKRGQNVTGQV 621
>sp|Q4A0V8|UAFA_STAS1 Uro-adherence factor A precursor
Length = 2316
Score = 35.4 bits (80), Expect = 0.15
Identities = 27/144 (18%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
Frame = +1
Query: 1 NKASEKGHFISNRQDKPGRNVGHNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQY 180
+K+SE N QD + H +N+ K E+ + +++ + ++
Sbjct: 105 DKSSEYDQKPINEQDTSNHHETHLNQNATENHVKEESKEVSTEEESIEDRKTEESTTEES 164
Query: 181 RQIDKYNVENLLQSFGR-NVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQN 357
+ +++ N EN + ++ + + +K+ + Y+N
Sbjct: 165 KAVEEANKENTTEKNDEGSLDLEKEKDTYKDEKDNGKKKNELESHNHRIENKVEDNVYKN 224
Query: 358 GNVQNFSKNKNEAVNKNDKINNDS 429
N ++KNE VNK+DK+N S
Sbjct: 225 NKETNL-ESKNENVNKDDKVNTSS 247
>sp|P34756|FAB1_YEAST 1-phosphatidylinositol-3-phosphate 5-kinase FAB1
(Phosphatidylinositol-3-phosphate 5-kinase) (Type III
PIP kinase)
Length = 2278
Score = 33.9 bits (76), Expect = 0.43
Identities = 36/159 (22%), Positives = 50/159 (31%), Gaps = 3/159 (1%)
Frame = +1
Query: 67 HNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQIDKYNVENLLQSFGRNVSXX 246
+N N N S + NT+ N N+ N R I Y N + N S
Sbjct: 475 NNLNNTTSNNSNYNNTNSNSNINNPAH--------SLRRSIFHYVSSNSVNKDSNNSSAT 526
Query: 247 XXXXXXXXXXXXXXXXXXXXXVKNEVRSKIN---NGPYQNGNVQNFSKNKNEAVNKNDKI 417
+ K N GP Q + N + + N N N+
Sbjct: 527 PASSAQSSSILDPANRIIGNYAHRNYKFKFNYNSKGPSQQNDTANGNNDNNNNNNNNNNN 586
Query: 418 NNDSRLRGQAAQLRQLDKNNGGQLNKGDVHVLNKIIHNP 534
NN++ G A D NN + G L+K NP
Sbjct: 587 NNNNSASGIA------DNNNIPSNDNGTTFTLDKKKRNP 619
>sp|P14196|AAC2_DICDI AAC-rich mRNA clone AAC11 protein
Length = 448
Score = 33.9 bits (76), Expect = 0.43
Identities = 19/78 (24%), Positives = 30/78 (38%)
Frame = +1
Query: 316 NEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNK 495
N + + NN N N N + N N + N N NN++ NN N
Sbjct: 283 NNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTN-NNNNNTNNNTNNNNNNINNNNNNTNN 341
Query: 496 GDVHVLNKIIHNPNFESN 549
+ + N+ +N N +N
Sbjct: 342 NNNNANNQNTNNNNMGNN 359
Score = 31.2 bits (69), Expect = 2.8
Identities = 18/71 (25%), Positives = 30/71 (42%)
Frame = +1
Query: 337 NNGPYQNGNVQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNKGDVHVLN 516
NN N N+ N + N N N N+ +N++ + + NN N + + N
Sbjct: 273 NNNNNNNSNINNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTNNNTNNNN--N 330
Query: 517 KIIHNPNFESN 549
I +N N +N
Sbjct: 331 NINNNNNNTNN 341
Score = 30.8 bits (68), Expect = 3.7
Identities = 24/124 (19%), Positives = 42/124 (33%)
Frame = +1
Query: 58 NVGHNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQIDKYNVENLLQSFGRNV 237
N +N N N+ N + + N + N N + ++ + + N N + N+
Sbjct: 273 NNNNNNNSNINNINNNNNNNSNNNNNSSNNNNNNNNSTNNNTNNNNNNTNNNTNNNNNNI 332
Query: 238 SXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDKI 417
+ N + NN N N+ N S N N N N +
Sbjct: 333 NNNNNN-------------------TNNNNNNANNQNTNNNNMGNNSNNNNNPNNNNHQN 373
Query: 418 NNDS 429
NN++
Sbjct: 374 NNNN 377
Score = 30.0 bits (66), Expect = 6.2
Identities = 20/80 (25%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +1
Query: 316 NEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDK--INNDSRLRGQAAQLRQLDKNNGGQL 489
N S NN N N N + N N +N N+ NN++ Q + N+
Sbjct: 305 NNNNSTNNNTNNNNNNTNNNTNNNNNNINNNNNNTNNNNNNANNQNTNNNNMGNNSNNNN 364
Query: 490 NKGDVHVLNKIIHNPNFESN 549
N + + N +N + SN
Sbjct: 365 NPNNNNHQNNNNNNTSNNSN 384
>sp|P40957|MAD1_YEAST Spindle assembly checkpoint component MAD1 (Mitotic arrest
deficient protein 1)
Length = 749
Score = 33.5 bits (75), Expect = 0.57
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Frame = +1
Query: 313 KNEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDKINNDSRLRGQAAQL-------RQLDK 471
KN+ + NN N N+ N ++ KN N ++I D +L + + +LD
Sbjct: 342 KNDNNNDNNNDTSNNNNINNNNRTKNNIRNNPEEIIRDWKLTKKECLILTDMNDKLRLDN 401
Query: 472 NNGGQLNKGDVHVLNKIIH-NPNFESN 549
NN LN N+I+ N N+E+N
Sbjct: 402 NNLKLLNDEMALERNQILDLNKNYENN 428
>sp|P54677|PI4K_DICDI Phosphatidylinositol 4-kinase (PI4-kinase) (PtdIns-4-kinase)
(PI4K-alpha)
Length = 1093
Score = 33.5 bits (75), Expect = 0.57
Identities = 35/165 (21%), Positives = 57/165 (34%)
Frame = +1
Query: 13 EKGHFISNRQDKPGRNVGHNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQID 192
E H I N K + +N N N S +++ + N L N +S + + +QY
Sbjct: 170 ENDHHIENDPKKDINSNNNNNNNINNNNSNNDDNNNNEILPNENSDNSINDENNQY---G 226
Query: 193 KYNVENLLQSFGRNVSXXXXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNGNVQN 372
N N + N+ K S I + N N N
Sbjct: 227 NSNNNNNISGENNNIKIDINSQNKSDSNIETLNSTLCEETKT---SPIKDDMENNNNNNN 283
Query: 373 FSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLNKGDVH 507
+ N N N N+ INN++ + + NN +N G ++
Sbjct: 284 NNNNNNNNNNNNNNINNNN--------INNNNINNNNNINYGHIN 320
>sp|Q17060|MRJP3_APIME Major royal jelly protein 3 precursor (MRJP-3) (Bee-milk protein)
(Royal jelly protein RJP57-1)
Length = 544
Score = 33.1 bits (74), Expect = 0.74
Identities = 36/152 (23%), Positives = 55/152 (36%)
Frame = +1
Query: 67 HNQNMNVKNYSKHENTSQNGNLRNVDSVPLLKRQPDQYRQIDKYNVENLLQSFGRNVSXX 246
HNQN +N +QN N +N D+ K+ + RQ D +N +N +
Sbjct: 423 HNQNAGNQNADNQNADNQNANNQNADNQNANKQNGN--RQNDNRQNDNKQNGNRQNDNKQ 480
Query: 247 XXXXXXXXXXXXXXXXXXXXXVKNEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDKINND 426
N NG QNGN QN +K +N ND
Sbjct: 481 NG---------------------NRQNDNKQNGNRQNGNKQNDNK-------QNGNRQND 512
Query: 427 SRLRGQAAQLRQLDKNNGGQLNKGDVHVLNKI 522
++ G Q ++N+ + N VH +K+
Sbjct: 513 NKRNGNRQNDNQNNQNDNNR-NDNQVHHSSKL 543
>sp|P54673|PI3K1_DICDI Phosphatidylinositol 3-kinase 1 (PI3-kinase) (PtdIns-3-kinase)
(PI3K)
Length = 1570
Score = 32.0 bits (71), Expect = 1.6
Identities = 26/83 (31%), Positives = 37/83 (44%)
Frame = +1
Query: 313 KNEVRSKINNGPYQNGNVQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLN 492
KN S NN + N + NKN N ND NN++ + + R+ KN Q
Sbjct: 34 KNNSTSSNNNNNHNNIEIIGIDNNKNNNKNNNDNNNNNNNI----DKKRKDSKNKQNQEI 89
Query: 493 KGDVHVLNKIIHNPNFESNKKFG 561
++ NK I+N N +SN G
Sbjct: 90 NQEMSE-NKKIYNSN-DSNCSSG 110
Score = 30.0 bits (66), Expect = 6.2
Identities = 21/81 (25%), Positives = 31/81 (38%), Gaps = 1/81 (1%)
Frame = +1
Query: 316 NEVRSKIN-NGPYQNGNVQNFSKNKNEAVNKNDKINNDSRLRGQAAQLRQLDKNNGGQLN 492
NE+ N N + N N N KN + + N N+ NN ++ +D N N
Sbjct: 12 NEINKNSNKNNTHLNSNYNNIYKNNSTSSNNNNNHNN--------IEIIGIDNNKNNNKN 63
Query: 493 KGDVHVLNKIIHNPNFESNKK 555
D + N I +S K
Sbjct: 64 NNDNNNNNNNIDKKRKDSKNK 84
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.316 0.133 0.384
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,731,506
Number of Sequences: 369166
Number of extensions: 1225197
Number of successful extensions: 4563
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3280
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3943
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6170718545
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)