Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_G12
(870 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 476 e-134
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 476 e-134
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 471 e-133
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 470 e-132
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 470 e-132
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 470 e-132
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 469 e-132
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 460 e-129
sp|Q6CPQ9|EF2_KLULA Elongation factor 2 (EF-2) 402 e-112
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 402 e-112
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 476 bits (1226), Expect = e-134
Identities = 233/289 (80%), Positives = 256/289 (88%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+QKYR +LLYEGP DDE A+ +KNCDP G L+MYISKMVPTSDKGRFYAFGRVFSG V T
Sbjct: 364 AQKYRCELLYEGPPDDEAAIGIKNCDPRGSLMMYISKMVPTSDKGRFYAFGRVFSGLVST 423
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
G KVRIMGPNY GKKEDLY K IQRTILMMGRYVE IEDVPCGNI GLVGVDQ+LVKTG
Sbjct: 424 GLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTG 483
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
TITTF A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE
Sbjct: 484 TITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGE 543
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+IIAGAGELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLY
Sbjct: 544 HIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLY 603
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
M A P + L+ DID G+++AR E+K+R RYL E Y+WDVTE+RKIWCF
Sbjct: 604 MKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVTEARKIWCF 652
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 476 bits (1225), Expect = e-134
Identities = 231/289 (79%), Positives = 259/289 (89%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+QKYR ++LYEGP DDE A+++K+CDP+G L+MYISKMVPTSDKGRFYAFGRVF+GKV T
Sbjct: 350 AQKYRMEMLYEGPHDDEAAIAVKSCDPDGPLMMYISKMVPTSDKGRFYAFGRVFAGKVAT 409
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
GQK RIMGPNY GKKEDLYEK+IQRTILMMGRYVEAIEDVP GNICGLVGVDQ+LVKTG
Sbjct: 410 GQKCRIMGPNYTPGKKEDLYEKAIQRTILMMGRYVEAIEDVPSGNICGLVGVDQFLVKTG 469
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
TITTF A+N++VMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ IEESGE
Sbjct: 470 TITTFKDAHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGE 529
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+IIAGAGELHLEICLKDLEE+HACIP+KKSDPVVSYRE+VS+ S ++CLSKSPNKHNRL
Sbjct: 530 HIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLL 589
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
M A PM + L DID G ++A+ E K R RYL E YD+DVTE+RKIWCF
Sbjct: 590 MKALPMPDGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCF 638
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 471 bits (1213), Expect = e-133
Identities = 231/289 (79%), Positives = 255/289 (88%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+QKYR +LLYEGP DDE A+ +K+CDP G L+MYISKMVPTSDKGRFYAFGRVFSG V T
Sbjct: 364 AQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGLVST 423
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
G KVRIMGPNY GKKEDLY K IQRTILMMGRYVE IEDVPCGNI GLVGVDQ+LVKTG
Sbjct: 424 GLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTG 483
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
TITTF A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE
Sbjct: 484 TITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGE 543
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+IIAGAGELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLY
Sbjct: 544 HIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLY 603
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
M A P + L+ DID G+++AR E+K+R RYL E Y+WDV E+RKIWCF
Sbjct: 604 MKARPFPDGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCF 652
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 470 bits (1210), Expect = e-132
Identities = 231/289 (79%), Positives = 254/289 (87%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+QKYR +LLYEGP DDE A+ +K+CDP G L+MYISKMVPTSDKGRFYAFGRVFSG V T
Sbjct: 364 AQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVST 423
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
G KVRIMGPNY GKKEDLY K IQRTILMMGRYVE IEDVPCGNI GLVGVDQ+LVKTG
Sbjct: 424 GLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTG 483
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
TITTF A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE
Sbjct: 484 TITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGE 543
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+IIAGAGELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLY
Sbjct: 544 HIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLY 603
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
M A P + L+ DID G+++AR E+K R RYL E Y+WDV E+RKIWCF
Sbjct: 604 MKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCF 652
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 470 bits (1210), Expect = e-132
Identities = 231/289 (79%), Positives = 254/289 (87%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+QKYR +LLYEGP DDE A+ +K+CDP G L+MYISKMVPTSDKGRFYAFGRVFSG V T
Sbjct: 364 AQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVST 423
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
G KVRIMGPNY GKKEDLY K IQRTILMMGRYVE IEDVPCGNI GLVGVDQ+LVKTG
Sbjct: 424 GLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTG 483
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
TITTF A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE
Sbjct: 484 TITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGE 543
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+IIAGAGELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLY
Sbjct: 544 HIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLY 603
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
M A P + L+ DID G+++AR E+K R RYL E Y+WDV E+RKIWCF
Sbjct: 604 MKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCF 652
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 470 bits (1210), Expect = e-132
Identities = 231/289 (79%), Positives = 254/289 (87%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+QKYR +LLYEGP DDE A+ +K+CDP G L+MYISKMVPTSDKGRFYAFGRVFSG V T
Sbjct: 364 AQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVST 423
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
G KVRIMGPNY GKKEDLY K IQRTILMMGRYVE IEDVPCGNI GLVGVDQ+LVKTG
Sbjct: 424 GLKVRIMGPNYTPGKKEDLYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTG 483
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
TITTF A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE
Sbjct: 484 TITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGE 543
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+IIAGAGELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLY
Sbjct: 544 HIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLY 603
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
M A P + L+ DID G+++AR E+K R RYL E Y+WDV E+RKIWCF
Sbjct: 604 MKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCF 652
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 469 bits (1206), Expect = e-132
Identities = 230/289 (79%), Positives = 254/289 (87%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+QKYR +LLYEGP DDE A+ +K+CDP G L+MYISKMVPTSDKGRFYAFGRVFSG V T
Sbjct: 364 AQKYRCELLYEGPPDDEAAMGIKSCDPKGPLMMYISKMVPTSDKGRFYAFGRVFSGVVST 423
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
G KVRIMGPNY GKKE+LY K IQRTILMMGRYVE IEDVPCGNI GLVGVDQ+LVKTG
Sbjct: 424 GLKVRIMGPNYTPGKKEELYLKPIQRTILMMGRYVEPIEDVPCGNIVGLVGVDQFLVKTG 483
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
TITTF A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE
Sbjct: 484 TITTFEHAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGE 543
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+IIAGAGELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLY
Sbjct: 544 HIIAGAGELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLY 603
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
M A P + L+ DID G+++AR E+K R RYL E Y+WDV E+RKIWCF
Sbjct: 604 MKARPFPDGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCF 652
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 460 bits (1183), Expect = e-129
Identities = 222/289 (76%), Positives = 251/289 (86%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+QKYR ++LYEGP DDE AV++K CDPNG L+MYISKMVPTSDKGRFYAFGRVFSGKV T
Sbjct: 358 AQKYRMEMLYEGPHDDEAAVAIKTCDPNGPLMMYISKMVPTSDKGRFYAFGRVFSGKVAT 417
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
G K RI GPNYV GKKEDLYEK+IQRTILMMGR++E IED+P GNI GLVGVDQYLVK G
Sbjct: 418 GMKARIQGPNYVPGKKEDLYEKTIQRTILMMGRFIEPIEDIPSGNIAGLVGVDQYLVKGG 477
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
TITT+ A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ EESGE
Sbjct: 478 TITTYKDAHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGE 537
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+IIAGAGELHLEICLKDLEE+HACIP+KKSDPVVSYRE+V S+++CLSKSPNKHNRL+
Sbjct: 538 HIIAGAGELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLH 597
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
TA PM + L+ DI+ G + AR E K R + L E Y++DVTE+RKIWCF
Sbjct: 598 CTAQPMPDGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCF 646
>sp|Q6CPQ9|EF2_KLULA Elongation factor 2 (EF-2)
Length = 842
Score = 402 bits (1034), Expect = e-112
Identities = 189/289 (65%), Positives = 236/289 (81%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+Q YR + LYEGP DD +++KNCDP L++Y+SKMVPTSDKGRFYAFGRVF+G V +
Sbjct: 348 AQNYRAEQLYEGPSDDPACIAIKNCDPKSDLMLYVSKMVPTSDKGRFYAFGRVFAGTVKS 407
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
GQKVRI GPN++ GKKEDL+ K+IQR +LMMGR+VE I+D P GNI GLVG+DQ+L+KTG
Sbjct: 408 GQKVRIQGPNFIPGKKEDLFIKAIQRAVLMMGRFVEPIDDCPAGNIIGLVGIDQFLLKTG 467
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
T+TTF GA+N++VMKFSVSPVV+VAVE KN DLPKLVEGLKRL+KSDP V +S+ ESGE
Sbjct: 468 TLTTFEGAHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLVSMSESGE 527
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+I+AG GELHLEICL+DLE +HA IP+K S PVV+YRE+V SS+ LSKSPNKHNR+Y
Sbjct: 528 HIVAGTGELHLEICLQDLENDHAGIPLKISPPVVAYRETVEGESSQTALSKSPNKHNRIY 587
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
+ A P+ EE+S I+ GKI R + K R R + + + WDVT++RKIWCF
Sbjct: 588 LKAQPIDEEVSLAIEGGKINPRDDFKARARIMADEFGWDVTDARKIWCF 636
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 402 bits (1034), Expect = e-112
Identities = 196/289 (67%), Positives = 237/289 (82%)
Frame = +3
Query: 3 SQKYRTDLLYEGPLDDEIAVSMKNCDPNGHLVMYISKMVPTSDKGRFYAFGRVFSGKVGT 182
+Q+YR + LYEGP+DDE AV ++NCD N L++Y+SKMVPTSD+GRFYAFGRVFSG V +
Sbjct: 348 AQQYRAETLYEGPMDDECAVGIRNCDANAPLMIYVSKMVPTSDRGRFYAFGRVFSGTVRS 407
Query: 183 GQKVRIMGPNYVVGKKEDLYEKSIQRTILMMGRYVEAIEDVPCGNICGLVGVDQYLVKTG 362
G KVRI GPNYV GKK+DL+ K+IQRT+LMMG +E IED P GNI GLVGVDQ+LVK+G
Sbjct: 408 GLKVRIQGPNYVPGKKDDLFIKAIQRTVLMMGSRIEPIEDCPAGNIIGLVGVDQFLVKSG 467
Query: 363 TITTFPGAYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGE 542
T+TT A+N++VMKFSVSPVV+VAVE KN DLPKLVEGLKRL+KSDP V + ESGE
Sbjct: 468 TLTTSEVAHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGE 527
Query: 543 NIIAGAGELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLY 722
+I+AGAGELHLEICLKDL+E+HA IP+K S PVVSYRESVS+ SS LSKSPNKHNR++
Sbjct: 528 HIVAGAGELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIF 587
Query: 723 MTATPMSEELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCF 869
MTA PMSEELS I+ G + R + K R R + + + WDVT++RKIWCF
Sbjct: 588 MTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCF 636
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 103,507,902
Number of Sequences: 369166
Number of extensions: 2225428
Number of successful extensions: 6559
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5967
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6167
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8598109270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)