Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_F09
(269 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (To... 40 0.001
sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromo... 38 0.008
sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion)... 32 0.46
sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3... 32 0.46
sp|Q6L8H4|KRA51_HUMAN Keratin-associated protein 5-1 (Kerat... 31 0.78
sp|P55115|NAS15_CAEEL Zinc metalloproteinase nas-15 precurs... 31 1.0
sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 pre... 30 1.3
sp|P55952|MT_POTPO Metallothionein (MT) 30 1.3
sp|P17495|DISB_TRIGA Disintegrin trigramin-beta (Platelet a... 30 1.7
sp|P12940|IBB_HORVU Bowman-Birk type trypsin inhibitor 30 1.7
>sp|P54190|TES26_TOXCA 26 kDa secreted antigen precursor (Toxocara excretory-secretory
antigen 26) (TES-26)
Length = 262
Score = 40.4 bits (93), Expect = 0.001
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 7/90 (7%)
Frame = +3
Query: 3 VAANCEIECVDREAYCAKPDINCLDGTTVE----KCPLACHLCGPCADSRSDCA---ELK 161
V++ +C+D + CA +C + +C C+ C C D ++CA L
Sbjct: 15 VSSGVAQQCMDSASDCAANAGSCFTRPVSQVLQNRCQRTCNTCD-CRDEANNCAASINLC 73
Query: 162 KNITCKRIFRLFCRKTCGYCS*SNFVFDNI 251
+N T + + R C+KTCG C+ F+ I
Sbjct: 74 QNPTFEPLVRDRCQKTCGLCAGCGFISSGI 103
>sp|Q09662|YS51_CAEEL Hypothetical protein ZK673.1 in chromosome II precursor
Length = 154
Score = 37.7 bits (86), Expect = 0.008
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 14/57 (24%)
Frame = +3
Query: 96 CPLACHLCG--------PCADSRSDCAELKKNITCKRIF------RLFCRKTCGYCS 224
CP C CG C DS ++CA +KN C F + +C KTC C+
Sbjct: 95 CPKTCGFCGGGSTAAPVQCVDSSTNCANWEKNGFCSSTFYDCANKKQYCAKTCKLCT 151
Score = 29.6 bits (65), Expect = 2.3
Identities = 19/55 (34%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Frame = +3
Query: 78 GTTVEKCPLACH---LCGPCADS-RSDCAE---LKKNITCKRIFRLFCRKTCGYC 221
GTTV A CAD +DC + L N + + FC KTCG+C
Sbjct: 48 GTTVSGATTAASGATTASTCADDPNTDCTQYTSLCSNAKYTPLLQQFCPKTCGFC 102
>sp|P24821|TENA_HUMAN Tenascin precursor (TN) (Hexabrachion) (Cytotactin) (Neuronectin)
(GMEM) (JI) (Miotendinous antigen)
(Glioma-associated-extracellular matrix antigen) (GP
150-225) (Tenascin-C) (TN-C)
Length = 2201
Score = 32.0 bits (71), Expect = 0.46
Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 5/59 (8%)
Frame = +3
Query: 15 CEIECVDREAYCAKPDINCLDGTTVEKC-----PLACHLCGPCADSRSDCAELKKNITC 176
C +C DR C C +G T E C P ACH G C + + C E + C
Sbjct: 315 CPNDCFDR-GRCINGTCYCEEGFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGLDC 372
Score = 28.9 bits (63), Expect = 3.9
Identities = 14/44 (31%), Positives = 22/44 (50%)
Frame = +3
Query: 18 EIECVDREAYCAKPDINCLDGTTVEKCPLACHLCGPCADSRSDC 149
E +CV E + ++C + ++CP CH G C D R +C
Sbjct: 358 EGQCVCDEGFAG---LDCSE----KRCPADCHNRGRCVDGRCEC 394
Score = 28.1 bits (61), Expect = 6.6
Identities = 15/51 (29%), Positives = 23/51 (45%)
Frame = +3
Query: 24 ECVDREAYCAKPDINCLDGTTVEKCPLACHLCGPCADSRSDCAELKKNITC 176
+CV E + K +C + ++CP CH G C D + C E + C
Sbjct: 546 QCVCHEGFMGK---DCKE----QRCPSDCHGQGRCVDGQCICHEGFTGLDC 589
>sp|Q19673|TYR3_CAEEL Putative tyrosinase-like protein tyr-3 precursor
Length = 683
Score = 32.0 bits (71), Expect = 0.46
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Frame = +3
Query: 93 KCPLACHLC------GPCADSRSDCAELKKNITC--KRIFRLFCRKTCGYC 221
+C ++C +C GPCAD DCA + C + CR++C C
Sbjct: 607 QCKVSCGVCRPNYVYGPCADYHYDCAAWARRGECLKNKWMPENCRRSCNTC 657
>sp|Q6L8H4|KRA51_HUMAN Keratin-associated protein 5-1 (Keratin-associated protein 5.1)
(Ultrahigh sulfur keratin-associated protein 5.1)
Length = 278
Score = 31.2 bits (69), Expect = 0.78
Identities = 17/63 (26%), Positives = 22/63 (34%)
Frame = +3
Query: 27 CVDREAYCAKPDINCLDGTTVEKCPLACHLCGPCADSRSDCAELKKNITCKRIFRLFCRK 206
C + C C G V C +C CG CA S+ C +C + C
Sbjct: 190 CGGSKGGCGSGCGGCGSGCGVPVCCCSCSSCGSCAGSKGGCGSSCSQCSCCK--PCCCSS 247
Query: 207 TCG 215
CG
Sbjct: 248 GCG 250
>sp|P55115|NAS15_CAEEL Zinc metalloproteinase nas-15 precursor (Nematode astacin 15)
Length = 571
Score = 30.8 bits (68), Expect = 1.0
Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Frame = +3
Query: 126 CADSRSDCAELKKNITCK---RIFRLFCRKTCGYC 221
C D R DC L CK + +C K+CG+C
Sbjct: 437 CEDLRVDCLVLVSQRYCKISQNFMKSYCAKSCGFC 471
>sp|P54108|CRIS3_HUMAN Cysteine-rich secretory protein 3 precursor (CRISP-3) (SGP28
protein)
Length = 245
Score = 30.4 bits (67), Expect = 1.3
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 33 DREAYCAKPDINCLDGTTVEKCPLACHLCGPCADSRSDCAELKKNITCK-RIFRLFCRKT 209
++ A CA NC DG C D S+C LK +TCK ++ R C+ +
Sbjct: 186 EQGAPCASCPDNCDDGLCTNGCKYE--------DLYSNCKSLKLTLTCKHQLVRDSCKAS 237
Query: 210 CGYCS 224
C CS
Sbjct: 238 CN-CS 241
>sp|P55952|MT_POTPO Metallothionein (MT)
Length = 58
Score = 30.4 bits (67), Expect = 1.3
Identities = 17/58 (29%), Positives = 21/58 (36%)
Frame = +3
Query: 48 CAKPDINCLDGTTVEKCPLACHLCGPCADSRSDCAELKKNITCKRIFRLFCRKTCGYC 221
CA+ C +G C C PC S+C E K C + C K C C
Sbjct: 5 CAEGTCECEEGKCKAGCKCTSCRCSPCEKCTSEC-ECKSKEECAK----NCTKPCSCC 57
>sp|P17495|DISB_TRIGA Disintegrin trigramin-beta (Platelet aggregation activation
inhibitor)
Length = 73
Score = 30.0 bits (66), Expect = 1.7
Identities = 16/49 (32%), Positives = 22/49 (44%)
Frame = +3
Query: 36 REAYCAKPDINCLDGTTVEKCPLACHLCGPCADSRSDCAELKKNITCKR 182
++ C P C D T + P A GPC D C+ +KK C+R
Sbjct: 4 KDCDCGSPANPCCDAATCKLLPGAQCGEGPCCD---QCSFMKKGTICRR 49
>sp|P12940|IBB_HORVU Bowman-Birk type trypsin inhibitor
Length = 124
Score = 30.0 bits (66), Expect = 1.7
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Frame = +3
Query: 24 ECVDREAYCAK---PDINCLDGTTVEKCPLACHLCGPCAD-SRSDCAE 155
+C D EA C + P C+D V +CP C CGP D SR C +
Sbjct: 8 KCCD-EAVCTRSIPPICTCMD--EVFECPKTCKSCGPMGDPSRRICQD 52
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,236,878
Number of Sequences: 369166
Number of extensions: 609638
Number of successful extensions: 2049
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1938
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2046
length of database: 68,354,980
effective HSP length: 59
effective length of database: 57,455,615
effective search space used: 1723668450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)