Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_E04
(857 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 465 e-131
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 463 e-130
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 462 e-130
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 462 e-130
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 462 e-130
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 459 e-129
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 453 e-127
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 451 e-126
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 389 e-108
sp|Q6CPQ9|EF2_KLULA Elongation factor 2 (EF-2) 388 e-107
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 465 bits (1196), Expect = e-131
Identities = 221/285 (77%), Positives = 251/285 (88%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE+IIAGAG
Sbjct: 491 AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAG 550
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P
Sbjct: 551 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVMCLSKSPNKHNRLYMKARPFP 610
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
+ L+ DID G+++AR E+K+R RYL E Y+WDVTE+RKIWCFGPDG GPN++ D++KGVQ
Sbjct: 611 DGLAEDIDKGEVSARQELKQRARYLAEKYEWDVTEARKIWCFGPDGTGPNILTDITKGVQ 670
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVA F WATK+GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC Y
Sbjct: 671 YLNEIKDSVVAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLY 730
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
A VLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E Q
Sbjct: 731 ACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQ 775
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 463 bits (1192), Expect = e-130
Identities = 220/285 (77%), Positives = 250/285 (87%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE+IIAGAG
Sbjct: 491 AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAG 550
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P
Sbjct: 551 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFP 610
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
+ L+ DID G+++AR E+K+R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQ
Sbjct: 611 DGLAEDIDKGEVSARQELKQRARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ 670
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC Y
Sbjct: 671 YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLY 730
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
ASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E Q
Sbjct: 731 ASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQ 775
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 462 bits (1189), Expect = e-130
Identities = 220/285 (77%), Positives = 249/285 (87%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE+IIAGAG
Sbjct: 491 AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAG 550
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P
Sbjct: 551 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFP 610
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
+ L+ DID G+++AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQ
Sbjct: 611 DGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ 670
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC Y
Sbjct: 671 YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLY 730
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
ASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E Q
Sbjct: 731 ASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQ 775
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 462 bits (1189), Expect = e-130
Identities = 220/285 (77%), Positives = 249/285 (87%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE+IIAGAG
Sbjct: 491 AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAG 550
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P
Sbjct: 551 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFP 610
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
+ L+ DID G+++AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQ
Sbjct: 611 DGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ 670
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC Y
Sbjct: 671 YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLY 730
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
ASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E Q
Sbjct: 731 ASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQ 775
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 462 bits (1189), Expect = e-130
Identities = 220/285 (77%), Positives = 249/285 (87%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE+IIAGAG
Sbjct: 491 AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAG 550
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P
Sbjct: 551 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFP 610
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
+ L+ DID G+++AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQ
Sbjct: 611 DGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ 670
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPTARRC Y
Sbjct: 671 YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPTARRCLY 730
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
ASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E Q
Sbjct: 731 ASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQ 775
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 459 bits (1181), Expect = e-129
Identities = 219/285 (76%), Positives = 248/285 (87%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ IEESGE+IIAGAG
Sbjct: 491 AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAG 550
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDLEE+HACIPIKKSDPVVSYRE+VS+ S+ +CLSKSPNKHNRLYM A P
Sbjct: 551 ELHLEICLKDLEEDHACIPIKKSDPVVSYRETVSEESNVLCLSKSPNKHNRLYMKARPFP 610
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
+ L+ DID G+++AR E+K R RYL E Y+WDV E+RKIWCFGPDG GPN++ D++KGVQ
Sbjct: 611 DGLAEDIDKGEVSARQELKARARYLAEKYEWDVAEARKIWCFGPDGTGPNILTDITKGVQ 670
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHR GGQIIPTARRC Y
Sbjct: 671 YLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPTARRCLY 730
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
ASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E Q
Sbjct: 731 ASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQ 775
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 453 bits (1165), Expect = e-127
Identities = 219/285 (76%), Positives = 247/285 (86%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N+RVMKFSVSPVVRVAVE KNPADLPKLVEGLKRLAKSDPMVQ EESGE+IIAGAG
Sbjct: 485 AHNMRVMKFSVSPVVRVAVEAKNPADLPKLVEGLKRLAKSDPMVQCIFEESGEHIIAGAG 544
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDLEE+HACIP+KKSDPVVSYRE+V S+++CLSKSPNKHNRL+ TA PM
Sbjct: 545 ELHLEICLKDLEEDHACIPLKKSDPVVSYRETVQSESNQICLSKSPNKHNRLHCTAQPMP 604
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
+ L+ DI+ G + AR E K R + L E Y++DVTE+RKIWCFGPDG GPNL++DV+KGVQ
Sbjct: 605 DGLADDIEGGTVNARDEFKARAKILAEKYEYDVTEARKIWCFGPDGTGPNLLMDVTKGVQ 664
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVA F WAT++GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPTARR FY
Sbjct: 665 YLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPTARRVFY 724
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
ASVLTA P LLEPVY EIQ PE A+GGIY LN+RRG +F E Q
Sbjct: 725 ASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQ 769
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 451 bits (1160), Expect = e-126
Identities = 215/285 (75%), Positives = 246/285 (86%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N++VMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQ IEESGE+IIAGAG
Sbjct: 477 AHNMKVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQCIIEESGEHIIAGAG 536
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDLEE+HACIP+KKSDPVVSYRE+VS+ S ++CLSKSPNKHNRL M A PM
Sbjct: 537 ELHLEICLKDLEEDHACIPLKKSDPVVSYRETVSEESDQMCLSKSPNKHNRLLMKALPMP 596
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
+ L DID G ++A+ E K R RYL E YD+DVTE+RKIWCFGPDG GPN ++D +K VQ
Sbjct: 597 DGLPEDIDNGDVSAKDEFKARARYLSEKYDYDVTEARKIWCFGPDGTGPNFILDCTKSVQ 656
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVA F WA+K+G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT RRC Y
Sbjct: 657 YLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTTRRCLY 716
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
A+ +TA P L+EPVY CEIQ PE A+GGIY LN+RRG +F E Q
Sbjct: 717 AAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQ 761
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 389 bits (1000), Expect = e-108
Identities = 195/285 (68%), Positives = 228/285 (80%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N++VMKFSVSPVV+VAVE KN DLPKLVEGLKRL+KSDP V + ESGE+I+AGAG
Sbjct: 475 AHNMKVMKFSVSPVVQVAVEVKNGNDLPKLVEGLKRLSKSDPCVLCTTSESGEHIVAGAG 534
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICLKDL+E+HA IP+K S PVVSYRESVS+ SS LSKSPNKHNR++MTA PMS
Sbjct: 535 ELHLEICLKDLQEDHAGIPLKISPPVVSYRESVSEPSSMTALSKSPNKHNRIFMTAEPMS 594
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
EELS I+ G + R + K R R + + + WDVT++RKIWCFGPD G N+VVD +K V
Sbjct: 595 EELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWCFGPDTTGANVVVDQTKAVA 654
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVAAF WA+K+G + EEN+R RFNI DV LHADAIHRGGGQIIPTARR Y
Sbjct: 655 YLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTARRVVY 714
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
AS L ASP + EPV+ EIQ E A+GGIYS LNK+RG +FSE Q
Sbjct: 715 ASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQ 759
>sp|Q6CPQ9|EF2_KLULA Elongation factor 2 (EF-2)
Length = 842
Score = 388 bits (997), Expect = e-107
Identities = 192/285 (67%), Positives = 226/285 (79%)
Frame = +3
Query: 3 AYNLRVMKFSVSPVVRVAVEPKNPADLPKLVEGLKRLAKSDPMVQISIEESGENIIAGAG 182
A+N++VMKFSVSPVV+VAVE KN DLPKLVEGLKRL+KSDP V +S+ ESGE+I+AG G
Sbjct: 475 AHNMKVMKFSVSPVVQVAVEVKNANDLPKLVEGLKRLSKSDPCVLVSMSESGEHIVAGTG 534
Query: 183 ELHLEICLKDLEEEHACIPIKKSDPVVSYRESVSKTSSEVCLSKSPNKHNRLYMTATPMS 362
ELHLEICL+DLE +HA IP+K S PVV+YRE+V SS+ LSKSPNKHNR+Y+ A P+
Sbjct: 535 ELHLEICLQDLENDHAGIPLKISPPVVAYRETVEGESSQTALSKSPNKHNRIYLKAQPID 594
Query: 363 EELSSDIDAGKITARSEIKERGRYLVETYDWDVTESRKIWCFGPDGNGPNLVVDVSKGVQ 542
EE+S I+ GKI R + K R R + + + WDVT++RKIWCFGPDGNGPNLVVD +K VQ
Sbjct: 595 EEVSLAIEGGKINPRDDFKARARIMADEFGWDVTDARKIWCFGPDGNGPNLVVDQTKAVQ 654
Query: 543 YLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTARRCFY 722
YLNEIKDSVVAAF WATK+G + E MR VR NI DVTLHADAIHRGGGQIIPT RR Y
Sbjct: 655 YLNEIKDSVVAAFQWATKEGPIFGEQMRSVRVNILDVTLHADAIHRGGGQIIPTMRRATY 714
Query: 723 ASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQ 857
A L A P + EPV+ EIQ PE A+GGIYS LNK+RG + SE Q
Sbjct: 715 AGFLLAEPKIQEPVFLVEIQCPEQAIGGIYSVLNKKRGQVVSEEQ 759
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,817,291
Number of Sequences: 369166
Number of extensions: 2139400
Number of successful extensions: 6956
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6119
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6599
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)