Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_D23
(614 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2) 308 7e-84
sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2) 308 9e-84
sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2) 308 9e-84
sp|P05086|EF2_MESAU Elongation factor 2 (EF-2) 308 9e-84
sp|P05197|EF2_RAT Elongation factor 2 (EF-2) 308 9e-84
sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2) 305 6e-83
sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2) 301 9e-82
sp|P13060|EF2_DROME Elongation factor 2 (EF-2) 297 2e-80
sp|O23755|EF2_BETVU Elongation factor 2 (EF-2) 262 6e-70
sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2) 257 1e-68
>sp|Q90705|EF2_CHICK Elongation factor 2 (EF-2)
Length = 858
Score = 308 bits (789), Expect = 7e-84
Identities = 143/194 (73%), Positives = 163/194 (84%)
Frame = +3
Query: 3 VSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPT 182
++KGVQYLNEIKDSVVA F WATK+GVLCEENMRGVRF++HDVTLHADAIHRGGGQIIPT
Sbjct: 665 ITKGVQYLNEIKDSVVAGFQWATKEGVLCEENMRGVRFDVHDVTLHADAIHRGGGQIIPT 724
Query: 183 ARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVV 362
ARRC YA VLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VV
Sbjct: 725 ARRCLYACVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVV 784
Query: 363 KAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGL 542
KAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL
Sbjct: 785 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDSASRPSQVVAETRKRKGL 844
Query: 543 SEDVPLLDKFLDKL 584
E +P LD FLDKL
Sbjct: 845 KEGIPALDNFLDKL 858
>sp|P58252|EF2_MOUSE Elongation factor 2 (EF-2)
Length = 858
Score = 308 bits (788), Expect = 9e-84
Identities = 143/194 (73%), Positives = 163/194 (84%)
Frame = +3
Query: 3 VSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPT 182
++KGVQYLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPT
Sbjct: 665 ITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPT 724
Query: 183 ARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVV 362
ARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VV
Sbjct: 725 ARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVV 784
Query: 363 KAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGL 542
KAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL
Sbjct: 785 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGL 844
Query: 543 SEDVPLLDKFLDKL 584
E +P LD FLDKL
Sbjct: 845 KEGIPALDNFLDKL 858
>sp|P13639|EF2_HUMAN Elongation factor 2 (EF-2)
Length = 858
Score = 308 bits (788), Expect = 9e-84
Identities = 143/194 (73%), Positives = 163/194 (84%)
Frame = +3
Query: 3 VSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPT 182
++KGVQYLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPT
Sbjct: 665 ITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPT 724
Query: 183 ARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVV 362
ARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VV
Sbjct: 725 ARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVV 784
Query: 363 KAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGL 542
KAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL
Sbjct: 785 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGL 844
Query: 543 SEDVPLLDKFLDKL 584
E +P LD FLDKL
Sbjct: 845 KEGIPALDNFLDKL 858
>sp|P05086|EF2_MESAU Elongation factor 2 (EF-2)
Length = 858
Score = 308 bits (788), Expect = 9e-84
Identities = 143/194 (73%), Positives = 163/194 (84%)
Frame = +3
Query: 3 VSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPT 182
++KGVQYLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPT
Sbjct: 665 ITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPT 724
Query: 183 ARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVV 362
ARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VV
Sbjct: 725 ARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVV 784
Query: 363 KAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGL 542
KAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL
Sbjct: 785 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGL 844
Query: 543 SEDVPLLDKFLDKL 584
E +P LD FLDKL
Sbjct: 845 KEGIPALDNFLDKL 858
>sp|P05197|EF2_RAT Elongation factor 2 (EF-2)
Length = 858
Score = 308 bits (788), Expect = 9e-84
Identities = 143/194 (73%), Positives = 163/194 (84%)
Frame = +3
Query: 3 VSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPT 182
++KGVQYLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHRGGGQIIPT
Sbjct: 665 ITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRGGGQIIPT 724
Query: 183 ARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVV 362
ARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VV
Sbjct: 725 ARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVV 784
Query: 363 KAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGL 542
KAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+P V +TRKRKGL
Sbjct: 785 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRPSQVVAETRKRKGL 844
Query: 543 SEDVPLLDKFLDKL 584
E +P LD FLDKL
Sbjct: 845 KEGIPALDNFLDKL 858
>sp|P29691|EF2_CAEEL Elongation factor 2 (EF-2)
Length = 852
Score = 305 bits (781), Expect = 6e-83
Identities = 146/194 (75%), Positives = 164/194 (84%)
Frame = +3
Query: 3 VSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPT 182
V+KGVQYLNEIKDSVVA F WAT++GVL +ENMRGVRFN+HDVTLHADAIHRGGGQIIPT
Sbjct: 659 VTKGVQYLNEIKDSVVAGFQWATREGVLSDENMRGVRFNVHDVTLHADAIHRGGGQIIPT 718
Query: 183 ARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVV 362
ARR FYASVLTA P LLEPVY EIQ PE A+GGIY LN+RRG +F E QV GTP +VV
Sbjct: 719 ARRVFYASVLTAEPRLLEPVYLVEIQCPEAAVGGIYGVLNRRRGHVFEESQVTGTPMFVV 778
Query: 363 KAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGL 542
KAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+PL+ +KP V DTRKRKGL
Sbjct: 779 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPLEAGTKPNQIVLDTRKRKGL 838
Query: 543 SEDVPLLDKFLDKL 584
E VP LD +LDK+
Sbjct: 839 KEGVPALDNYLDKM 852
>sp|P09445|EF2_CRIGR Elongation factor 2 (EF-2)
Length = 858
Score = 301 bits (771), Expect = 9e-82
Identities = 141/194 (72%), Positives = 161/194 (82%)
Frame = +3
Query: 3 VSKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPT 182
++KGVQYLNEIKDSVVA F WATK+G LCEENMRGVRF++HDVTLHADAIHR GGQIIPT
Sbjct: 665 ITKGVQYLNEIKDSVVAGFQWATKEGALCEENMRGVRFDVHDVTLHADAIHRRGGQIIPT 724
Query: 183 ARRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVV 362
ARRC YASVLTA P L+EP+Y EIQ PE +GGIY LN++RG +F E QVAGTP +VV
Sbjct: 725 ARRCLYASVLTAQPRLMEPIYLVEIQCPEQVVGGIYGVLNRKRGHVFEESQVAGTPMFVV 784
Query: 363 KAYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGL 542
KAYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P D S+ V +TRKRKGL
Sbjct: 785 KAYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQILPGDPFDNSSRGSQVVAETRKRKGL 844
Query: 543 SEDVPLLDKFLDKL 584
E +P LD FLDKL
Sbjct: 845 KEGIPALDNFLDKL 858
>sp|P13060|EF2_DROME Elongation factor 2 (EF-2)
Length = 844
Score = 297 bits (760), Expect = 2e-80
Identities = 138/193 (71%), Positives = 162/193 (83%)
Frame = +3
Query: 6 SKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTA 185
+K VQYLNEIKDSVVA F WA+K+G+L +EN+RGVRFNI+DVTLHADAIHRGGGQIIPT
Sbjct: 652 TKSVQYLNEIKDSVVAGFQWASKEGILADENLRGVRFNIYDVTLHADAIHRGGGQIIPTT 711
Query: 186 RRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVK 365
RRC YA+ +TA P L+EPVY CEIQ PE A+GGIY LN+RRG +F E QV GTP +VVK
Sbjct: 712 RRCLYAAAITAKPRLMEPVYLCEIQCPEVAVGGIYGVLNRRRGHVFEENQVVGTPMFVVK 771
Query: 366 AYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLS 545
AYLPVNESF FT++LR+ TGGQAFPQCVFDHWQ+ PG+P +P SKP V+DTRKRKGL
Sbjct: 772 AYLPVNESFGFTADLRSNTGGQAFPQCVFDHWQVLPGDPSEPSSKPYAIVQDTRKRKGLK 831
Query: 546 EDVPLLDKFLDKL 584
E +P L ++LDKL
Sbjct: 832 EGLPDLSQYLDKL 844
>sp|O23755|EF2_BETVU Elongation factor 2 (EF-2)
Length = 843
Score = 262 bits (669), Expect = 6e-70
Identities = 130/192 (67%), Positives = 146/192 (76%)
Frame = +3
Query: 9 KGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTAR 188
KGVQYLNEIKDSVVA F WA+K+G L EENMRG+ F + DV LH DAIHRGGGQIIPTAR
Sbjct: 652 KGVQYLNEIKDSVVAGFQWASKEGALAEENMRGICFEVCDVVLHTDAIHRGGGQIIPTAR 711
Query: 189 RCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVKA 368
R FYAS LTA P LLEPVY EIQ PE ALGGIYS LN++RG +F EMQ GTP Y +KA
Sbjct: 712 RVFYASQLTAKPRLLEPVYLVEIQAPENALGGIYSVLNQKRGHVFEEMQRPGTPLYNIKA 771
Query: 369 YLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLSE 548
YLPV ESF F+S LRA T GQAFPQCVFDHW++ P +PL+ S+ V RKRKGL E
Sbjct: 772 YLPVVESFGFSSTLRASTSGQAFPQCVFDHWEMMPSDPLEAGSQASTLVSVIRKRKGLKE 831
Query: 549 DVPLLDKFLDKL 584
+ L +F DKL
Sbjct: 832 QMTPLSEFEDKL 843
>sp|O14460|EF2_SCHPO Elongation factor 2 (EF-2)
Length = 842
Score = 257 bits (657), Expect = 1e-68
Identities = 129/193 (66%), Positives = 146/193 (75%)
Frame = +3
Query: 6 SKGVQYLNEIKDSVVAAFNWATKDGVLCEENMRGVRFNIHDVTLHADAIHRGGGQIIPTA 185
+K V YLNEIKDSVVAAF WA+K+G + EEN+R RFNI DV LHADAIHRGGGQIIPTA
Sbjct: 650 TKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHADAIHRGGGQIIPTA 709
Query: 186 RRCFYASVLTASPCLLEPVYQCEIQGPETALGGIYSTLNKRRGIIFSEMQVAGTPQYVVK 365
RR YAS L ASP + EPV+ EIQ E A+GGIYS LNK+RG +FSE Q GTP Y +K
Sbjct: 710 RRVVYASTLLASPIIQEPVFLVEIQVSENAMGGIYSVLNKKRGHVFSEEQRVGTPLYNIK 769
Query: 366 AYLPVNESFNFTSELRAQTGGQAFPQCVFDHWQLFPGNPLDPLSKPGITVKDTRKRKGLS 545
AYLPVNESF FT ELR T GQAFPQ VFDHW G+PLDP SKPG V + RKRKGL
Sbjct: 770 AYLPVNESFGFTGELRQATAGQAFPQLVFDHWSPMSGDPLDPTSKPGQIVCEARKRKGLK 829
Query: 546 EDVPLLDKFLDKL 584
E+VP ++ D+L
Sbjct: 830 ENVPDYTEYYDRL 842
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,189,064
Number of Sequences: 369166
Number of extensions: 1597393
Number of successful extensions: 3530
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3310
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3414
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4846822695
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)