Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_C07
(842 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P53990|K0174_HUMAN Protein KIAA0174 (Putative MAPK-activ... 206 7e-53
sp|P53843|YN05_YEAST Hypothetical 34.5 kDa protein in PIK1-... 89 1e-17
sp|Q12446|LAS17_YEAST Proline-rich protein LAS17 35 0.34
sp|O43313|Y0431_HUMAN Hypothetical protein KIAA0431 34 0.44
sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain protein 11 (Ank... 33 1.3
sp|O95466|FMNL_HUMAN Formin-like 1 protein (Formin-like pro... 31 3.7
sp|Q8CHI5|PER1_RAT Period circadian protein 1 (rPER1) 31 3.7
sp|Q15562|TEAD2_HUMAN Transcriptional enhancer factor TEF-4... 31 4.9
sp|Q8A8C3|DNAJ_BACTN Chaperone protein dnaJ 31 4.9
sp|Q9JL26|FMNL_MOUSE Formin-like 1 protein (Formin-related ... 31 4.9
>sp|P53990|K0174_HUMAN Protein KIAA0174 (Putative MAPK-activating protein PM28)
Length = 364
Score = 206 bits (524), Expect = 7e-53
Identities = 125/310 (40%), Positives = 171/310 (55%), Gaps = 35/310 (11%)
Frame = +1
Query: 1 KKNTEIALKSRKEIADYLTSAKYDRARIKVEMIIRQDYLVEVYELIEMFCDLLLARFGLI 180
KK TE+A K+RKEIADYL + K +RARI+VE IIR+DYLVE E++E++CDLLLARFGLI
Sbjct: 27 KKKTELAQKARKEIADYLAAGKDERARIRVEHIIREDYLVEAMEILELYCDLLLARFGLI 86
Query: 181 ECQKEIDPGLEEQIATLIWVTPRLQTDVQELKLITDQLHLKYGREYGLACQSNSLNNVNE 360
+ KE+D GL E ++TLIW PRLQ++V ELK++ DQL KY +EYG C++N + VN+
Sbjct: 87 QSMKELDSGLAESVSTLIWAAPRLQSEVAELKIVADQLCAKYSKEYGKLCRTNQIGTVND 146
Query: 361 KVMEKLSIKAPPKRLVEQYLVEIAKSFDVPYEPEEDIDPPASNWNPGEFYAPLPPNLIDF 540
++M KLS++APPK LVE+YL+EIAK+++VPYEP+ + A PG + +LID
Sbjct: 147 RLMHKLSVEAPPKILVERYLIEIAKNYNVPYEPDSVVMAEAP---PG-----VETDLIDV 198
Query: 541 -MGEKPPLINPNAYXXXXXXXXXXXXXXXXXXXXXXXXXISNAPYPYP-QKKPLNDNEAP 714
+ P +N P+ YP K P + N P
Sbjct: 199 GFTDDVKKGGPGRGGSGGFTAPVGGPDGTVPMPMPMPMPSANTPFSYPLPKGPSDFNGLP 258
Query: 715 M---------------SLPPKYEEFD----------------GSSSQESA--PPLPPNGP 795
M + PP YE D G + SA P P +
Sbjct: 259 MGTYQAFPNIHPPQIPATPPSYESVDDINADKNISSAQIVGPGPKPEASAKLPSRPADNY 318
Query: 796 NDLFLPEIPS 825
++ LPE+PS
Sbjct: 319 DNFVLPELPS 328
>sp|P53843|YN05_YEAST Hypothetical 34.5 kDa protein in PIK1-POL2 intergenic region
Length = 298
Score = 89.4 bits (220), Expect = 1e-17
Identities = 63/199 (31%), Positives = 108/199 (54%), Gaps = 8/199 (4%)
Frame = +1
Query: 1 KKNTEIALKSRKEIADYLTSAKYDRARIKVEMIIRQDYLVEVYELIEMFCDLLLARFGLI 180
+K IA +SR+++A L + K +A +VE +I D +E+ E++E++C+LLLAR +I
Sbjct: 28 EKQQAIAKQSRRQVAQLLLTNKEQKAHYRVETLIHDDIHIELLEILELYCELLLARVQVI 87
Query: 181 E--------CQKEIDPGLEEQIATLIWVTPRLQTDVQELKLITDQLHLKYGREYGLACQS 336
++ +D G+ E I +LI+ +V+EL + D + K E+ +
Sbjct: 88 NDISTEEQLVKEHMDDGINEAIRSLIYAI-LFVDEVKELSQLKDLMAWKINVEFVNGVIA 146
Query: 337 NSLNNVNEKVMEKLSIKAPPKRLVEQYLVEIAKSFDVPYEPEEDIDPPASNWNPGEFYAP 516
+ + +V EK+++K S P + LV+ YL EIAK++DVPY E+ +S+ +F P
Sbjct: 147 DHI-DVPEKIIKKCSPSVPKEELVDLYLKEIAKTYDVPYSKLENSLSSSSSNISSDFSDP 205
Query: 517 LPPNLIDFMGEKPPLINPN 573
++ D EKP L N
Sbjct: 206 -SGDIEDNDEEKPILALDN 223
>sp|Q12446|LAS17_YEAST Proline-rich protein LAS17
Length = 633
Score = 34.7 bits (78), Expect = 0.34
Identities = 20/57 (35%), Positives = 29/57 (50%)
Frame = +1
Query: 670 YPYPQKKPLNDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGPNDLFLPEIPSDQNNT 840
+P PL + AP+ PP++ S Q +AP P + P +PEIPS Q+ T
Sbjct: 234 HPKHSLPPLPNQFAPLPDPPQHN----SPPQNNAPSQPQSNPFPFPIPEIPSTQSAT 286
>sp|O43313|Y0431_HUMAN Hypothetical protein KIAA0431
Length = 667
Score = 34.3 bits (77), Expect = 0.44
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +1
Query: 655 ISNAPYPYPQKKPLNDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGPNDLFLPE 816
++N P P P + L +E + L P +E+ GS++ + PP P L LP+
Sbjct: 91 LNNQPIPRPDTQELEASE--IKLEPSFEDSCGSNTDKQTLTTPPRYPQKLLLPK 142
>sp|Q6UB99|ANR11_HUMAN Ankyrin repeat domain protein 11 (Ankyrin repeat-containing cofactor
1)
Length = 2664
Score = 32.7 bits (73), Expect = 1.3
Identities = 28/73 (38%), Positives = 33/73 (45%), Gaps = 16/73 (21%)
Frame = +1
Query: 658 SNAPYPYPQKKPLNDNEAPMSLP---PKYEEF-DGS-------SSQESAPPLPPNGPNDL 804
S APYP P P AP +LP P E+ DG S+ E+AP PP+G
Sbjct: 2012 SEAPYPAPPASP-----APYALPVAEPGLEDVKDGVDAVPAAISTSEAAPYAPPSGLESF 2066
Query: 805 F-----LPEIPSD 828
F LPE P D
Sbjct: 2067 FSNCKSLPEAPLD 2079
>sp|O95466|FMNL_HUMAN Formin-like 1 protein (Formin-like protein) (Leukocyte formin)
(CLL-associated antigen KW-13)
Length = 1100
Score = 31.2 bits (69), Expect = 3.7
Identities = 19/45 (42%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Frame = +1
Query: 664 APYPYPQKKPL-NDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGP 795
AP P P L + EAP S PP+ GS APPLP + P
Sbjct: 541 APPPPPPLPGLPSPQEAPPSAPPQAPPLPGSPEPPPAPPLPGDLP 585
>sp|Q8CHI5|PER1_RAT Period circadian protein 1 (rPER1)
Length = 1244
Score = 31.2 bits (69), Expect = 3.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +1
Query: 655 ISNAPYPYPQKKPLNDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGPN 798
+ N +P P P ++AP+ PP S S PP PP+ P+
Sbjct: 919 LPNYLFPSPTSYPYGVSQAPVEGPPTPASHSPSPSLPPPPPSPPHRPD 966
>sp|Q15562|TEAD2_HUMAN Transcriptional enhancer factor TEF-4 (TEA domain family member 2)
(TEAD-2)
Length = 447
Score = 30.8 bits (68), Expect = 4.9
Identities = 14/47 (29%), Positives = 21/47 (44%)
Frame = +1
Query: 658 SNAPYPYPQKKPLNDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGPN 798
S P+ P KP + +SL P + G ++ PLPP P+
Sbjct: 168 SGPPWNVPDVKPFSQTPFTLSLTPPSTDLPGYEPPQALSPLPPPTPS 214
>sp|Q8A8C3|DNAJ_BACTN Chaperone protein dnaJ
Length = 396
Score = 30.8 bits (68), Expect = 4.9
Identities = 22/51 (43%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -1
Query: 833 FWSDGISGRNRSFGPFGGNGG-ALS*DEEPSN-SSYFGGKLMGASLSFNGF 687
F G+SG + GPFGG GG +S D+ S FGG+ G S F GF
Sbjct: 70 FGHAGVSGAAGNGGPFGGFGGEGMSMDDIFSMFGDIFGGRGGGFSGGFGGF 120
>sp|Q9JL26|FMNL_MOUSE Formin-like 1 protein (Formin-related protein)
Length = 1094
Score = 30.8 bits (68), Expect = 4.9
Identities = 19/50 (38%), Positives = 22/50 (44%), Gaps = 4/50 (8%)
Frame = +1
Query: 658 SNAPYPYPQKKPL----NDNEAPMSLPPKYEEFDGSSSQESAPPLPPNGP 795
S P P P PL + EAP S PP G + APPLP + P
Sbjct: 536 SPPPPPPPPPPPLPNLQSQQEAPPSAPPLAPPLPGCAEPPPAPPLPGDLP 585
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.313 0.136 0.400
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,563,833
Number of Sequences: 369166
Number of extensions: 1974044
Number of successful extensions: 4660
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4248
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4620
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8245425915
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)