Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_019_B24
(860 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic 528 e-150
sp|P17126|ACT_HYDAT Actin, non-muscle 6.2 526 e-149
sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic 526 e-149
sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic 526 e-149
sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic 525 e-149
sp|P41113|ACT3_PODCA Actin-3 525 e-149
sp|P92179|ACTC_BIOGL Actin, cytoplasmic 524 e-148
sp|Q964D9|ACTC_HELTI Actin, cytoplasmic 523 e-148
sp|P12716|ACTC_PISOC Actin, cytoplasmic 523 e-148
sp|Q26065|ACT_PLAMG Actin, adductor muscle 521 e-148
>sp|Q964E2|ACTC_BIOPF Actin, cytoplasmic
Length = 376
Score = 528 bits (1360), Expect = e-150
Identities = 260/286 (90%), Positives = 267/286 (93%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F++EMHTA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAATSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPE +FQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMF
Sbjct: 248 VITIGNERFRCPEAVFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEIT+LAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|P17126|ACT_HYDAT Actin, non-muscle 6.2
Length = 376
Score = 526 bits (1356), Expect = e-149
Identities = 260/286 (90%), Positives = 268/286 (93%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVAL F++EM TA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALDFEQEMQTAASSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPETLFQPSFIG+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMF
Sbjct: 248 VITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEI++LAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEISALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|Q964E1|ACTC_BIOOB Actin, cytoplasmic
Length = 376
Score = 526 bits (1356), Expect = e-149
Identities = 260/286 (90%), Positives = 266/286 (93%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTATSSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPE LFQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMF
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEIT+LAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|Q964E0|ACTC_BIOTE Actin, cytoplasmic
Length = 376
Score = 526 bits (1354), Expect = e-149
Identities = 259/286 (90%), Positives = 266/286 (93%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPE +FQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMF
Sbjct: 248 VITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEIT+LAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|Q964E3|ACTC_BIOAL Actin, cytoplasmic
Length = 376
Score = 525 bits (1352), Expect = e-149
Identities = 258/286 (90%), Positives = 266/286 (93%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPE +FQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMF
Sbjct: 248 VITIGNERFRCPEAMFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEIT+LAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|P41113|ACT3_PODCA Actin-3
Length = 376
Score = 525 bits (1351), Expect = e-149
Identities = 258/286 (90%), Positives = 268/286 (93%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNSPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAIIRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DY+MKILTERGYSFTTTAEREIVRDIKEKL+YVAL F++EM TA PDGQ
Sbjct: 188 DYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEQEMQTAVTSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPETLFQP+FIG+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMF
Sbjct: 248 VITIGNERFRCPETLFQPAFIGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEI+SLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEISSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|P92179|ACTC_BIOGL Actin, cytoplasmic
Length = 376
Score = 524 bits (1349), Expect = e-148
Identities = 258/286 (90%), Positives = 265/286 (92%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPE FQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMF
Sbjct: 248 VITIGNERFRCPEATFQPSFLGMEAAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEIT+LAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|Q964D9|ACTC_HELTI Actin, cytoplasmic
Length = 376
Score = 523 bits (1348), Expect = e-148
Identities = 257/286 (89%), Positives = 266/286 (93%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIV+DSGDGVTHTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVIDSGDGVTHTVPIYEGYALPHAIMRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTASTSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPE ++QPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMF
Sbjct: 248 VITIGNERFRCPEAMYQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEIT+LAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEITALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|P12716|ACTC_PISOC Actin, cytoplasmic
Length = 376
Score = 523 bits (1346), Expect = e-148
Identities = 257/286 (89%), Positives = 265/286 (92%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIV DSGDGV+HTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNTPAMYVAIQAVLSLYASGRTTGIVFDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F++EM TA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMQTAASSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPE LFQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGGSTMF
Sbjct: 248 VITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGSTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKE+T+LAPPTMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEVTALAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 353
>sp|Q26065|ACT_PLAMG Actin, adductor muscle
Length = 376
Score = 521 bits (1342), Expect = e-148
Identities = 258/286 (90%), Positives = 265/286 (92%)
Frame = +2
Query: 2 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 181
LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET
Sbjct: 68 LKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFET 127
Query: 182 FNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAICRLDLAGRDLT 361
FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAI RLDLAGRDLT
Sbjct: 128 FNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLAGRDLT 187
Query: 362 DYLMKILTERGYSFTTTAEREIVRDIKEKLSYVALSFDEEMHTAXXXXXXXXXXXXPDGQ 541
DYLMKILTERGYSFTTTAEREIVRDIKEKL YVAL F+ EM TA PDGQ
Sbjct: 188 DYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYELPDGQ 247
Query: 542 VITIGNERFRCPETLFQPSFIGLECAGIHETTYNSIMKCDVDIRKDLYANIVLSGGSTMF 721
VITIGNERFRCPE+LFQPSF+G+E AGIHETTYNSIMKCDVDIRKDLYAN VLSGG+TMF
Sbjct: 248 VITIGNERFRCPESLFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYANTVLSGGTTMF 307
Query: 722 PGISDRMQKEITSLAPPTMKIKIIAPPERKYSVWIGGSILASLSTF 859
PGI+DRMQKEIT+LAP TMKIKIIAPPERKYSVWIGGSILASLSTF
Sbjct: 308 PGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTF 353
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 97,983,560
Number of Sequences: 369166
Number of extensions: 1965836
Number of successful extensions: 5537
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5200
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5370
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8534739105
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)