Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_P20
(593 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4 141 1e-33
sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 (Mm... 140 3e-33
sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 (He... 134 1e-31
sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 (DnaJ... 134 1e-31
sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2 132 5e-31
sp|Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (DNAJ-1) 129 6e-30
sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 (AtJ3) (AtDjA3) 125 1e-28
sp|Q04960|DNJH_CUCSA DnaJ protein homolog (DNAJ-1) 124 2e-28
sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1 122 5e-28
sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 (AtDjA2) 122 5e-28
>sp|Q8WW22|DNJA4_HUMAN DnaJ homolog subfamily A member 4
Length = 397
Score = 141 bits (355), Expect = 1e-33
Identities = 76/169 (44%), Positives = 109/169 (64%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
D+ IVL++K H+VF R+ DLI MK+ L ++LCGFK+TI TLDNRILV+ +K GEVIK+
Sbjct: 239 DVIIVLDQKDHSVFQRRGHDLIMKMKIQLSEALCGFKKTIKTLDNRILVITSKAGEVIKH 298
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILPPSQFSSSLDN 361
+ R + +EGMP YK+P E+G LIIQF V+FPE ++L +KL +L ++LPP Q D+
Sbjct: 299 GDLRCVRDEGMPIYKAPLEKGILIIQFLVIFPEKHWLSLEKLPQLEALLPPRQKVRITDD 358
Query: 362 MKEAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQRVQC 508
M + E L + P+ N + + Y+ D++G G VQC
Sbjct: 359 MDQVE---LKEFCPNEQN------WRQHREAYEEDEDGPQAG----VQC 394
>sp|Q9JMC3|DNJA4_MOUSE DnaJ homolog subfamily A member 4 (MmDjA4)
Length = 397
Score = 140 bits (352), Expect = 3e-33
Identities = 75/169 (44%), Positives = 108/169 (63%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
D+ IVL++K H+VF R+ DLI MK+ L ++LCGFK+TI TLD+R+LV+ +K GEVIK+
Sbjct: 239 DVIIVLDQKDHSVFQRRGQDLIMKMKIQLSEALCGFKKTIKTLDDRVLVISSKSGEVIKH 298
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILPPSQFSSSLDN 361
+ + I NEGMP YK+P E+G +IIQF VVFPE +L +KL +L ++LPP Q D+
Sbjct: 299 GDLKCIRNEGMPIYKAPLEKGVMIIQFLVVFPEKQWLSQEKLPQLEALLPPRQKVRITDD 358
Query: 362 MKEAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQRVQC 508
M + E L ++P ++ + + Y+ DDE G VQC
Sbjct: 359 MDQVE---LKEFNP------NEQSWRQHREAYEEDDEEPRAG----VQC 394
>sp|P31689|DNJA1_HUMAN DnaJ homolog subfamily A member 1 (Heat shock 40 kDa protein 4)
(DnaJ protein homolog 2) (HSJ-2) (HSDJ)
Length = 397
Score = 134 bits (338), Expect = 1e-31
Identities = 72/165 (43%), Positives = 103/165 (62%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
DI IVL++K H VFTR+ DL M + LV++LCGF++ I+TLDNR +V+ + PG+++K+
Sbjct: 238 DIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKH 297
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILPPSQFSSSLDN 361
+ + + NEGMP Y+ P+E+GRLII+F V FPEN FL DKL+ L +LP + D
Sbjct: 298 GDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDE 357
Query: 362 MKEAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQ 496
M + E L +DP+ + R H Y+ DDE GG Q
Sbjct: 358 MDQVE---LVDFDPN-----QERRRHYNGEAYE-DDEHHPRGGVQ 393
>sp|P63036|DNJA1_RAT DnaJ homolog subfamily A member 1 (DnaJ-like protein 1)
sp|P63037|DNJA1_MOUSE DnaJ homolog subfamily A member 1 (Heat shock 40 kDa protein 4)
(DnaJ protein homolog 2) (HSJ-2)
Length = 397
Score = 134 bits (338), Expect = 1e-31
Identities = 72/165 (43%), Positives = 103/165 (62%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
DI IVL++K H VFTR+ DL M + LV++LCGF++ I+TLDNR +V+ + PG+++K+
Sbjct: 238 DIIIVLDQKDHAVFTRRGEDLFMCMDIQLVEALCGFQKPISTLDNRTIVITSHPGQIVKH 297
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILPPSQFSSSLDN 361
+ + + NEGMP Y+ P+E+GRLII+F V FPEN FL DKL+ L +LP + D
Sbjct: 298 GDIKCVLNEGMPIYRRPYEKGRLIIEFKVNFPENGFLSPDKLSLLEKLLPERKEVEETDE 357
Query: 362 MKEAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQ 496
M + E L +DP+ + R H Y+ DDE GG Q
Sbjct: 358 MDQVE---LVDFDPN-----QERRRHYNGEAYE-DDEHHPRGGVQ 393
>sp|P42824|DNJH2_ALLPO DnaJ protein homolog 2
Length = 418
Score = 132 bits (333), Expect = 5e-31
Identities = 75/172 (43%), Positives = 108/172 (62%), Gaps = 2/172 (1%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
DI VL++K H F RK DL Y L L ++LCGF+ +T LDNR L++++ PGEVIK
Sbjct: 252 DIVFVLQQKEHPKFKRKGDDLFYEHSLSLTEALCGFQFVLTHLDNRQLLIKSNPGEVIKP 311
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILPPSQFSSSLDN 361
+++ I++EGMP Y+ PF +G+L I F V FP++ L D+ L S+L PS+ +S L +
Sbjct: 312 DQFKGINDEGMPMYQRPFMRGKLYIHFSVDFPDS--LTPDQCKALESVL-PSRNASRLTD 368
Query: 362 MK--EAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQRVQCA 511
M+ E EE +H D ++ + ++ + YD DDEG GGAQRVQCA
Sbjct: 369 MEIDECEETTMH--DVNIEEEMRRKQHQQAQEAYDEDDEG--HGGAQRVQCA 416
>sp|Q03363|DNJH1_ALLPO DnaJ protein homolog 1 (DNAJ-1)
Length = 397
Score = 129 bits (324), Expect = 6e-30
Identities = 72/171 (42%), Positives = 103/171 (60%), Gaps = 1/171 (0%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
DI VL++K H F RK DL Y L L ++LCGF+ +T LD R L++++ PGEV+K
Sbjct: 231 DIVFVLQQKEHPKFQRKGDDLFYKHTLSLTEALCGFQFVLTHLDGRQLLIKSNPGEVVKP 290
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILPPSQFSSSLD- 358
+++AI++EGMP Y+ PF +G+L IQF V FP++ L D+ + S+LP S S D
Sbjct: 291 DQFKAINDEGMPMYQRPFMRGKLYIQFLVDFPDS--LTPDQCKVIESVLPRSASSQLTDM 348
Query: 359 NMKEAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQRVQCA 511
+ E EE +H D ++ + ++ YD DDEG GG QRVQCA
Sbjct: 349 EIDECEETTMH--DVNIEEEMRRKQHQHAQEAYDEDDEG--HGGGQRVQCA 395
>sp|Q94AW8|DNAJ3_ARATH Chaperone protein dnaJ 3 (AtJ3) (AtDjA3)
Length = 420
Score = 125 bits (313), Expect = 1e-28
Identities = 71/171 (41%), Positives = 100/171 (58%), Gaps = 1/171 (0%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
DI VL++K H F RK DL L L ++LCGF+ +T LD R L++++ PGEV+K
Sbjct: 252 DIVFVLQQKEHPKFKRKGEDLFVEHTLSLTEALCGFQFVLTHLDGRSLLIKSNPGEVVKP 311
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILP-PSQFSSSLD 358
Y+AI +EGMP Y+ PF +G+L I F V FP++ L D+ L ++LP PS S
Sbjct: 312 DSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPDS--LSPDQTKALEAVLPKPSTAQLSDM 369
Query: 359 NMKEAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQRVQCA 511
+ E EE LH D ++ + + +R D D++ PGGAQRVQCA
Sbjct: 370 EIDECEETTLH--DVNIEDEMRRKAQAQREAYDDDDEDDDHPGGAQRVQCA 418
>sp|Q04960|DNJH_CUCSA DnaJ protein homolog (DNAJ-1)
Length = 413
Score = 124 bits (310), Expect = 2e-28
Identities = 73/172 (42%), Positives = 104/172 (60%), Gaps = 2/172 (1%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
DI VL++K H F RK DL L LV+SLCGF+ +T LD R L++++ PGEV+K
Sbjct: 250 DIVFVLQQKEHPKFKRKGDDLFVEHTLSLVESLCGFQFILTHLDGRQLLIKSLPGEVVKP 309
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILPPSQFSSSLDN 361
+++AI++EGMP Y+ PF +G+L I F V FP++ L ++ L +LPP + S L +
Sbjct: 310 DQFKAINDEGMPMYQRPFMKGKLYIHFSVEFPDS--LNPEQCKALEGVLPP-RTSVQLSD 366
Query: 362 MK--EAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQRVQCA 511
M+ E EE LH N + + R + YD D++ M GGAQRVQCA
Sbjct: 367 MELDECEETTLHD-----VNIEEEMRRKQAQEAYDEDED--MHGGAQRVQCA 411
>sp|P43644|DNJH_ATRNU DnaJ protein homolog ANJ1
Length = 417
Score = 122 bits (307), Expect = 5e-28
Identities = 68/171 (39%), Positives = 101/171 (59%), Gaps = 1/171 (0%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
DI VL++K H F RK DL Y L L ++LCGF+ +T LD R L++++ GEV+K
Sbjct: 252 DIVFVLQQKEHPKFKRKGEDLFYEHTLSLTEALCGFRFVLTHLDGRQLLIKSNLGEVVKP 311
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILPPS-QFSSSLD 358
+++AI++EGMP Y+ PF +G++ I F V FP++ L D++ L +ILPP S +
Sbjct: 312 DQFKAIEDEGMPIYQRPFMKGKMYIHFTVEFPDS--LNPDQVKSLEAILPPKPSMSLTYM 369
Query: 359 NMKEAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQRVQCA 511
+ E EE LH + ++ + + + YD DDE P G QRVQCA
Sbjct: 370 ELDECEETTLH--NVNIEEEMKRKQTQAQQEAYDEDDE---PAGGQRVQCA 415
>sp|P42825|DNAJ2_ARATH Chaperone protein dnaJ 2 (AtDjA2)
Length = 419
Score = 122 bits (307), Expect = 5e-28
Identities = 69/171 (40%), Positives = 102/171 (59%), Gaps = 1/171 (0%)
Frame = +2
Query: 2 DICIVLEEKPHNVFTRKKADLIYNMKLDLVDSLCGFKRTITTLDNRILVVETKPGEVIKN 181
DI V+++K H F RK DL + L ++LCGF+ +T LD R L++++KPGEV+K
Sbjct: 253 DIVFVIQQKEHPKFKRKGEDLFVEHTISLTEALCGFQFVLTHLDKRQLLIKSKPGEVVKP 312
Query: 182 LEYRAIDNEGMPKYKSPFEQGRLIIQFDVVFPENNFLPTDKLNKLRSILP-PSQFSSSLD 358
Y+AI +EGMP Y+ PF +G+L I F V FPE+ L D+ + ++LP P++ + S
Sbjct: 313 DSYKAISDEGMPIYQRPFMKGKLYIHFTVEFPES--LSPDQTKAIEAVLPKPTKAAISDM 370
Query: 359 NMKEAEECVLHPYDPSMANSKSQDRYHERHHVYDSDDEGGMPGGAQRVQCA 511
+ + EE LH + + + + + YD DDE PGGAQRVQCA
Sbjct: 371 EIDDCEETTLHDVN---IEDEMKRKAQAQREAYD-DDEEDHPGGAQRVQCA 417
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,273,281
Number of Sequences: 369166
Number of extensions: 1255437
Number of successful extensions: 3742
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3609
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3720
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4504118060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)