Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_P14
(227 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P14625|ENPL_HUMAN Endoplasmin precursor (94 kDa glucose-... 33 0.26
sp|Q95M18|ENPL_BOVIN Endoplasmin precursor (94 kDa glucose-... 33 0.26
sp|P08110|ENPL_CHICK Endoplasmin precursor (Heat shock 108 ... 32 0.34
sp|P41148|ENPL_CANFA Endoplasmin precursor (94 kDa glucose-... 32 0.34
sp|Q29092|ENPL_PIG Endoplasmin precursor (94 kDa glucose-re... 32 0.45
sp|Q07630|RRPO_PVXHB RNA replication protein (165 kDa prote... 32 0.45
sp|P19351|TNNT_DROME Troponin T, skeletal muscle (Upheld pr... 32 0.58
sp|P53107|YRB30_YEAST Ran-specific GTPase-activating protei... 32 0.58
sp|P60972|LGT_MYCPA Prolipoprotein diacylglyceryl transferase 32 0.58
sp|Q9QXJ1|APBB1_MOUSE Amyloid beta A4 precursor protein-bin... 32 0.58
>sp|P14625|ENPL_HUMAN Endoplasmin precursor (94 kDa glucose-regulated protein) (GRP94)
(gp96 homolog) (Tumor rejection antigen 1)
Length = 803
Score = 32.7 bits (73), Expect = 0.26
Identities = 20/44 (45%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Frame = +1
Query: 1 RIEKILRTSLNIPHDEAVEDD-EPIEEKPAEDEGEVPEPPKTEQ 129
RIE++LR SLNI D VE++ E E+ AED E E + E+
Sbjct: 738 RIERMLRLSLNIDPDAKVEEEPEEEPEETAEDTTEDTEQDEDEE 781
>sp|Q95M18|ENPL_BOVIN Endoplasmin precursor (94 kDa glucose-regulated protein) (GRP94)
Length = 804
Score = 32.7 bits (73), Expect = 0.26
Identities = 19/53 (35%), Positives = 29/53 (54%)
Frame = +1
Query: 1 RIEKILRTSLNIPHDEAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENKEAVDK 159
RIE++LR SLNI D VE++ EE+P E + E + ++ E D+
Sbjct: 738 RIERMLRLSLNIDPDAKVEEEP--EEEPEETTEDTAEDTEQDEEEEMDAGTDE 788
>sp|P08110|ENPL_CHICK Endoplasmin precursor (Heat shock 108 kDa protein) (HSP108) (HSP
108) (Transferrin-binding protein)
Length = 795
Score = 32.3 bits (72), Expect = 0.34
Identities = 19/37 (51%), Positives = 24/37 (64%)
Frame = +1
Query: 1 RIEKILRTSLNIPHDEAVEDDEPIEEKPAEDEGEVPE 111
RIE++LR SLNI D VE +EP E + A +E E E
Sbjct: 737 RIERMLRLSLNIDLDAKVE-EEPEEPEDAAEEAEQDE 772
>sp|P41148|ENPL_CANFA Endoplasmin precursor (94 kDa glucose-regulated protein) (GRP94)
Length = 804
Score = 32.3 bits (72), Expect = 0.34
Identities = 18/52 (34%), Positives = 29/52 (55%)
Frame = +1
Query: 1 RIEKILRTSLNIPHDEAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENKEAVD 156
RIE++LR SLNI + D +EE+P E+ E E + +++E +D
Sbjct: 738 RIERMLRLSLNI------DPDAKVEEEPEEEPEETTEDTTEDTEQDDEEEMD 783
>sp|Q29092|ENPL_PIG Endoplasmin precursor (94 kDa glucose-regulated protein) (GRP94)
(GP96 homolog) (98 kDa protein kinase) (PPK 98) (ppk98)
Length = 804
Score = 32.0 bits (71), Expect = 0.45
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +1
Query: 1 RIEKILRTSLNIPHDEAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENKEAVDK 159
RIE++LR SLNI D VE++ EE+P E + E + + E D+
Sbjct: 738 RIERMLRLSLNIDPDAKVEEEP--EEEPEETTEDTTEDTEQDDDEEMDAGADE 788
>sp|Q07630|RRPO_PVXHB RNA replication protein (165 kDa protein) (ORF 1 protein) [Includes:
RNA-directed RNA polymerase ; Helicase ]
Length = 1456
Score = 32.0 bits (71), Expect = 0.45
Identities = 16/46 (34%), Positives = 30/46 (65%)
Frame = +1
Query: 16 LRTSLNIPHDEAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENKEAV 153
L+T L++ ++A+ + EP+E +P + PEP +T +EN+E+V
Sbjct: 982 LKTFLSVVREQALREYEPVEAEPIRE----PEP-QTHMCVENEESV 1022
>sp|P19351|TNNT_DROME Troponin T, skeletal muscle (Upheld protein) (Intended thorax
protein)
Length = 397
Score = 31.6 bits (70), Expect = 0.58
Identities = 14/35 (40%), Positives = 22/35 (62%)
Frame = +1
Query: 43 DEAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENKE 147
++ VEDDE +EE+ E+E E E + E+ E +E
Sbjct: 343 EDIVEDDEEVEEEVVEEEDEEAEEDEEEEEEEEEE 377
Score = 28.5 bits (62), Expect = 4.9
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +1
Query: 43 DEAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENKE 147
DE E+DE EE+ E+E E E + E+ E +E
Sbjct: 361 DEEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 395
Score = 28.1 bits (61), Expect = 6.4
Identities = 14/35 (40%), Positives = 21/35 (60%)
Frame = +1
Query: 43 DEAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENKE 147
+EA ED+E EE+ E+E E E + E+ E +E
Sbjct: 362 EEAEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 396
>sp|P53107|YRB30_YEAST Ran-specific GTPase-activating protein 30 (Ran binding protein 30)
(RANBP30)
Length = 440
Score = 31.6 bits (70), Expect = 0.58
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +1
Query: 46 EAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENK 144
EA+E+DE +E+ E+EG+ E K E+ ENK
Sbjct: 339 EAIEEDEEEDEEEDEEEGKDGEERKEEEEEENK 371
>sp|P60972|LGT_MYCPA Prolipoprotein diacylglyceryl transferase
Length = 427
Score = 31.6 bits (70), Expect = 0.58
Identities = 14/30 (46%), Positives = 18/30 (60%)
Frame = +1
Query: 43 DEAVEDDEPIEEKPAEDEGEVPEPPKTEQP 132
+ A E EP E+P E E PE P+TE+P
Sbjct: 350 EAAEEASEPEAEEPEAPEAEEPEEPETEEP 379
Score = 30.0 bits (66), Expect = 1.7
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = +1
Query: 46 EAVEDDEPIEEKPAEDEGEVPEPPKTEQP 132
EA E +EP E+P D GE PE E P
Sbjct: 367 EAEEPEEPETEEPEADSGEEPEEESGEAP 395
Score = 28.1 bits (61), Expect = 6.4
Identities = 14/31 (45%), Positives = 17/31 (54%)
Frame = +1
Query: 46 EAVEDDEPIEEKPAEDEGEVPEPPKTEQPIE 138
EA E + P E+P E E E PE E+P E
Sbjct: 359 EAEEPEAPEAEEPEEPETEEPEADSGEEPEE 389
>sp|Q9QXJ1|APBB1_MOUSE Amyloid beta A4 precursor protein-binding family B member 1 (Fe65
protein)
Length = 710
Score = 31.6 bits (70), Expect = 0.58
Identities = 16/34 (47%), Positives = 22/34 (64%)
Frame = +1
Query: 46 EAVEDDEPIEEKPAEDEGEVPEPPKTEQPIENKE 147
EA EDDE EE+ E+E ++ PP +P+EN E
Sbjct: 156 EAEEDDEDEEEE--EEEEDLSSPPGLPEPLENVE 187
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.312 0.136 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,620,071
Number of Sequences: 369166
Number of extensions: 354654
Number of successful extensions: 2354
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2270
length of database: 68,354,980
effective HSP length: 47
effective length of database: 59,672,435
effective search space used: 1670828180
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)