Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_M15
(331 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 80 1e-15
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 80 1e-15
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 80 1e-15
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 76 2e-14
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 76 2e-14
sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1) 75 6e-14
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 74 8e-14
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 74 1e-13
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 74 1e-13
sp|P34933|HSP73_BOVIN Heat shock 70 kDa protein 3 74 1e-13
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 80.1 bits (196), Expect = 1e-15
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXX 185
D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 566 DKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGF 625
Query: 186 XXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 626 PGGGAPPSGGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 80.1 bits (196), Expect = 1e-15
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXX 185
D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 566 DKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGF 625
Query: 186 XXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 626 PGGGAPPSGGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 80.1 bits (196), Expect = 1e-15
Identities = 38/81 (46%), Positives = 47/81 (58%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXX 185
D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 566 DKQKILDKCNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGF 625
Query: 186 XXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 626 PGGGAPPSGGASSGPTIEEVD 646
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 76.3 bits (186), Expect = 2e-14
Identities = 38/86 (44%), Positives = 48/86 (55%), Gaps = 5/86 (5%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXX 170
D+ I++KC E IGWLDKNQ A K+E+++H KELEKVCNPI+TK+YQ
Sbjct: 566 DKTKILEKCNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGM 625
Query: 171 XXXXXXXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 626 AGGFPGAGGAAPGGGGSSGPTIEEVD 651
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 76.3 bits (186), Expect = 2e-14
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXX 176
D++ I+DKC E IGWLDKNQ A ++EF++ KELEKVCNPI+TK+YQ
Sbjct: 566 DKQKILDKCNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPEGM 625
Query: 177 XXXXXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 626 PGGFPGAGAAPGGGSSGPTIEEVD 649
>sp|Q9I8F9|HSP71_ORYLA Heat shock 70 kDa protein 1 (HSP70-1)
Length = 639
Score = 74.7 bits (182), Expect = 6e-14
Identities = 38/81 (46%), Positives = 46/81 (56%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXX 185
DRK +V+KC E I WL+ NQ A KDEF + KELEKVCNPI++K+YQ
Sbjct: 568 DRKRVVEKCDETIAWLENNQLADKDEFQHKQKELEKVCNPIISKLYQ---------GGMP 618
Query: 186 XXXXXXXXXXXKQGPTVEEVD 248
QGPT+EEVD
Sbjct: 619 SGSCREQARADSQGPTIEEVD 639
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 74.3 bits (181), Expect = 8e-14
Identities = 38/85 (44%), Positives = 47/85 (55%), Gaps = 4/85 (4%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ----XXXXXXXXX 173
D++ I+DKC E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 566 DKQKILDKCNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGM 625
Query: 174 XXXXXXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 626 PGGFPGGGAPPSGGASSGPTIEEVD 650
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 73.6 bits (179), Expect = 1e-13
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXX 185
D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 569 DKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------GGP 618
Query: 186 XXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 619 GGGSGGGGSGASGGPTIEEVD 639
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 73.6 bits (179), Expect = 1e-13
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXX 185
D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 569 DKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ------------- 615
Query: 186 XXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 616 ---GGPGGGGSSGGPTIEEVD 633
>sp|P34933|HSP73_BOVIN Heat shock 70 kDa protein 3
Length = 631
Score = 73.6 bits (179), Expect = 1e-13
Identities = 36/81 (44%), Positives = 47/81 (58%)
Frame = +3
Query: 6 DRKLIVDKCQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXX 185
D+ I+DKCQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 564 DKNKILDKCQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ------------- 610
Query: 186 XXXXXXXXXXXKQGPTVEEVD 248
GPT+EEVD
Sbjct: 611 GGPGGGGGSGASGGPTIEEVD 631
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,744,629
Number of Sequences: 369166
Number of extensions: 230673
Number of successful extensions: 879
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 802
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 824
length of database: 68,354,980
effective HSP length: 78
effective length of database: 53,945,650
effective search space used: 1672315150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)