Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_018_K20
(302 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (He... 71 7e-13
sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (He... 71 7e-13
sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (He... 71 7e-13
sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HS... 70 2e-12
sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (He... 67 1e-11
sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (He... 65 4e-11
sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein 65 4e-11
sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (... 65 5e-11
sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (He... 65 5e-11
sp|P34933|HSP73_BOVIN Heat shock 70 kDa protein 3 65 5e-11
>sp|P11142|HSP7C_HUMAN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|Q71U34|HSP7C_SAGOE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
(Intracellular vitamin D binding protein 1)
Length = 646
Score = 71.2 bits (173), Expect = 7e-13
Identities = 34/73 (46%), Positives = 40/73 (54%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXX 180
C E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 574 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 633
Query: 181 XXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 634 GGASSGPTIEEVD 646
>sp|P63017|HSP7C_MOUSE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
sp|P63018|HSP7C_RAT Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 71.2 bits (173), Expect = 7e-13
Identities = 34/73 (46%), Positives = 40/73 (54%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXX 180
C E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 574 CNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 633
Query: 181 XXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 634 GGASSGPTIEEVD 646
>sp|P19378|HSP7C_CRIGR Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 646
Score = 71.2 bits (173), Expect = 7e-13
Identities = 34/73 (46%), Positives = 40/73 (54%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXX 180
C E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 574 CNEIISWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGFPGGGAPPS 633
Query: 181 XXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 634 GGASSGPTIEEVD 646
>sp|P08108|HSP70_ONCMY Heat shock cognate 70 kDa protein (HSP70)
Length = 651
Score = 69.7 bits (169), Expect = 2e-12
Identities = 35/78 (44%), Positives = 42/78 (53%), Gaps = 5/78 (6%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ-----XXXXXXXXXXXXXXXX 165
C E IGWLDKNQ A K+E+++H KELEKVCNPI+TK+YQ
Sbjct: 574 CNEVIGWLDKNQTAEKEEYEHHQKELEKVCNPIITKLYQGAGGMPGGMPEGMAGGFPGAG 633
Query: 166 XXXXXXXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 634 GAAPGGGGSSGPTIEEVD 651
>sp|Q90473|HSP7C_BRARE Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 649
Score = 67.4 bits (163), Expect = 1e-11
Identities = 34/76 (44%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXX 171
C E IGWLDKNQ A ++EF++ KELEKVCNPI+TK+YQ
Sbjct: 574 CNEVIGWLDKNQTAEREEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPEGMPGGFPGAG 633
Query: 172 XXXXXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 634 AAPGGGSSGPTIEEVD 649
>sp|P19120|HSP7C_BOVIN Heat shock cognate 71 kDa protein (Heat shock 70 kDa protein 8)
Length = 650
Score = 65.5 bits (158), Expect = 4e-11
Identities = 34/77 (44%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ----XXXXXXXXXXXXXXXXX 168
C E I WLDKNQ A K+EF++ KELEKVCNPI+TK+YQ
Sbjct: 574 CNEIINWLDKNQTAEKEEFEHQQKELEKVCNPIITKLYQSAGGMPGGMPGGMPGGFPGGG 633
Query: 169 XXXXXXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 634 APPSGGASSGPTIEEVD 650
>sp|P47773|HSP7C_ICTPU Heat shock cognate 71 kDa protein
Length = 649
Score = 65.5 bits (158), Expect = 4e-11
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQ---XXXXXXXXXXXXXXXXXX 171
C E I WLDKNQ A KDE+++ K+LEKVCNPI+TK+YQ
Sbjct: 574 CNEVISWLDKNQTAEKDEYEHQQKDLEKVCNPIITKLYQSDGGMPGGMPDGMPGGFQELG 633
Query: 172 XXXXXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 634 AAPGGGSSGPTIEEVD 649
>sp|P54652|HSP72_HUMAN Heat shock-related 70 kDa protein 2 (Heat shock 70 kDa protein 2)
Length = 639
Score = 65.1 bits (157), Expect = 5e-11
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXX 180
CQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 577 CQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------GGPGGGSGGGG 626
Query: 181 XXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 627 SGASGGPTIEEVD 639
>sp|P14659|HSP72_RAT Heat shock-related 70 kDa protein 2 (Heat shock protein 70.2)
(Testis-specific heat shock protein-related) (HST)
Length = 633
Score = 65.1 bits (157), Expect = 5e-11
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXX 180
CQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 577 CQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ----------------GGPGG 620
Query: 181 XXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 621 GGSSGGPTIEEVD 633
>sp|P34933|HSP73_BOVIN Heat shock 70 kDa protein 3
Length = 631
Score = 65.1 bits (157), Expect = 5e-11
Identities = 32/73 (43%), Positives = 41/73 (56%)
Frame = +1
Query: 1 CQEAIGWLDKNQQAAKDEFDYHYKELEKVCNPIMTKMYQXXXXXXXXXXXXXXXXXXXXX 180
CQE I WLD+NQ A KDE+++ KELE+VCNPI++K+YQ
Sbjct: 572 CQEVINWLDRNQMAEKDEYEHKQKELERVCNPIISKLYQ-------------GGPGGGGG 618
Query: 181 XXXKQGPTVEEVD 219
GPT+EEVD
Sbjct: 619 SGASGGPTIEEVD 631
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 19,267,070
Number of Sequences: 369166
Number of extensions: 162767
Number of successful extensions: 661
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 590
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 607
length of database: 68,354,980
effective HSP length: 69
effective length of database: 55,608,265
effective search space used: 1723856215
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)